Basic Information

Insect: Coenonympha arcania
Gene Symbol: Mtf1
Assembly: GCA_036785405.1
Location: CM072061.1:4181983-4195617[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.2e-06 0.00031 21.9 1.1 1 23 114 138 114 138 0.97

2 7 0.0021 0.15 13.4 0.1 1 23 144 168 144 168 0.96

3 7 7.8 5.8e+02 2.1 0.2 1 14 174 189 174 190 0.82

4 7 1.5e-06 0.00011 23.3 1.3 1 23 194 218 194 218 0.97

5 7 0.00017 0.013 16.8 2.6 5 23 230 248 224 248 0.89

6 7 9.1e-05 0.0067 17.7 0.2 2 23 255 278 254 278 0.91

7 7 3.5 2.6e+02 3.2 3.1 2 23 657 680 656 680 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.2e-06	0.00031	21.9	1.1	1	23	114	138	114	138	0.97
2	7	0.0021	0.15	13.4	0.1	1	23	144	168	144	168	0.96
3	7	7.8	5.8e+02	2.1	0.2	1	14	174	189	174	190	0.82
4	7	1.5e-06	0.00011	23.3	1.3	1	23	194	218	194	218	0.97
5	7	0.00017	0.013	16.8	2.6	5	23	230	248	224	248	0.89
6	7	9.1e-05	0.0067	17.7	0.2	2	23	255	278	254	278	0.91
7	7	3.5	2.6e+02	3.2	3.1	2	23	657	680	656	680	0.93

Sequence Information

Coding Sequence: atggccgcaTGGCTCGATGACAGTGGCTGTCCAGAAACCGCGATACAAAACAATTTAGAAAAATTATTGTCAGAGGCTTTTACACCTCAAGACAATAGTGATAAAACCTGTGAGTTGATTCTAAAAGAATTCGGGAGTTTATCTGAAAACGTTCAACGTGAAAACGAAGTTATTAATGTACCACCGAGAAGTAAAGTTATTACGGATAATTGTACGGAAAATATATTTGGAGAAGTTTCCAGTACCAAAGACAAATTACAAGATGTGCCAAAATCAGAAGTCGAATCAAAATCAGCCAATGATAATAACAAGAAGAAGCTGGAGTATAACAACTCGAGATACAACTGTGAATATGAGGGTTGCCAAAGAACATATAGCACTTCTGGCAACTTACGGACACACATGAAGACTCATAAAGGTGAATACAGGTTCATGTGTCCGATGGAGTCATGCGGCAAAGCGTTCCTAACTTCGTATAGTCTCAAAATCCACGTGCGGGCACATACAAAGGCGAAACCATTTGCGTGTGACATTGGATCCTGTGATAAAGCTTTCAATACATTGTACAGCGGCGACACGTTTAACTGCAAAGCTGCCGGCTGCACCAAGTTCTTCACGACGCTGAGCGACCTGAAGAAACACATTCGCACGCACACACAGGAGAGGCCCTATAAATGTATAACCGACGGATGCGGGAAATCCTTCACGGCGTCTCACCACCTGAaggcgcacgcgcgcacgcactcgGGCACGCGGCAGCACGCCTGCGCCGCCGCCGGCTGCGGCAAGCTGTTCTCCACCCCCACCAGCCTGCGCGCGCACGTTAGGAAACACCAGATCGAAGCCGAGACACAAACTGTACAGGTCATAGAGAACGAACCGCCGGCGAAACGCGAAAATGACGTCATGATTTGGGACAGCCTGCTCGAGTCATTTGGTAGGATCACCACCGAGTCCAACTCCACTGACGGCAGTCTAGAAGACATCACCAGCGTCGACCCGCTCGCCACTAACAATAACATGGACATCACTGAACTGCTTTTCGATAACGCCACTAACAACACTAACATCACTAACATCGATAACGCTAACATCGCTATAGATTACGATTTGAGTAACCTCGAAGTGCTCTCTCCCTTTAACGTCGATAAAATCGTCAAAAAAGACGACAACGACGCGAATTGGGTAGTCGATAACGTCGATGCCTTACAGCCAATAACATTGCCCCCACCCAAAATGGGTGTCGCATCGAAAGCCATGCAATTGGCACTGGCCAACGAAATCGAAATACAAGCTCCGTGGATAGACGTCACTGCTCTAGCGTCTTCCATACAAGAAACACCAGTTAGCATTAAGGAAAACGTCCCGGAGAGCATATTCACTCTCGCGACATTCGTCCCAACACATATGCAGAGCTACATAGATCTAAACACCGAAGCCGTGCCGACGGCCAACCTCATGACCCAGAGCTCCTTCCAGTTAGACACCCCGAACATTCTAGATGTTAGCGATAAAGTTTTCAATGACAGCGAACTCGTGACGAACCACGACGCTACTAAAATTGACGCAGACATTGACTTCTTGAAAAACACCGTCGAAATCGACGACCGATCTTTGAACACGCCTTCCCCGAGTAGAGTTCAGCATAACATCGAAATAAACCCGTCTAATTCCGTTCTATTCAACACAGATTTGGCTCTCGAAGACACCTTGCTATTCAATAACGAACCCCCTTCTGATATGTATGTTGTGAAGACCGAGAACATTTTCGGTAAGAGAGCTAAAGCGAAGAATCCTCTAGAGCAGCTAGCGGCCGATGCAGGCATTTGCGCTTGCAACGACTGCAAATGTGGCCCCAATAGTGGCGAGTGCAGAAATTGCCAGAACCACGAGCTACCGGAACCGGTTGGATGCGGAGACGACAAATGCTCGTGCGGTGCGAACTGTGAGTGTGACCATGCGGAAATGAAATGTGCCGTTGGATGTGGCCGGGCCACGGACACCAACCACAACACTTTCATGCATTACCACAAGAGGCACAACAACTCAAACCTCGAGGAATTCGGCGTTTACACCCACGAATGCGACGAATCTTTGCTCGGCATGATTGACAATATTAAATGTCCGTGCAGCGGCACGAGCGATGGCAAGTGTTCGCCTGAATGTGGTCCAGATCGAAGCTGTTCAAAACCTGCCACAGGGAGCTCGCACAAAAAGTCATGTTGCGTCACAATTTGCTTCAGAAAGTTAGATGCTTTCAAACAGTTTCTCAACGACGCCAATGTCATGAATGCTATAAAAGTTAAAAACGTTAATTTAACAACCAGCTTCTAA
Protein Sequence: MAAWLDDSGCPETAIQNNLEKLLSEAFTPQDNSDKTCELILKEFGSLSENVQRENEVINVPPRSKVITDNCTENIFGEVSSTKDKLQDVPKSEVESKSANDNNKKKLEYNNSRYNCEYEGCQRTYSTSGNLRTHMKTHKGEYRFMCPMESCGKAFLTSYSLKIHVRAHTKAKPFACDIGSCDKAFNTLYSGDTFNCKAAGCTKFFTTLSDLKKHIRTHTQERPYKCITDGCGKSFTASHHLKAHARTHSGTRQHACAAAGCGKLFSTPTSLRAHVRKHQIEAETQTVQVIENEPPAKRENDVMIWDSLLESFGRITTESNSTDGSLEDITSVDPLATNNNMDITELLFDNATNNTNITNIDNANIAIDYDLSNLEVLSPFNVDKIVKKDDNDANWVVDNVDALQPITLPPPKMGVASKAMQLALANEIEIQAPWIDVTALASSIQETPVSIKENVPESIFTLATFVPTHMQSYIDLNTEAVPTANLMTQSSFQLDTPNILDVSDKVFNDSELVTNHDATKIDADIDFLKNTVEIDDRSLNTPSPSRVQHNIEINPSNSVLFNTDLALEDTLLFNNEPPSDMYVVKTENIFGKRAKAKNPLEQLAADAGICACNDCKCGPNSGECRNCQNHELPEPVGCGDDKCSCGANCECDHAEMKCAVGCGRATDTNHNTFMHYHKRHNNSNLEEFGVYTHECDESLLGMIDNIKCPCSGTSDGKCSPECGPDRSCSKPATGSSHKKSCCVTICFRKLDAFKQFLNDANVMNAIKVKNVNLTTSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01151591;
90% Identity: iTF_00354546;
80% Identity: -