Carc000405.2
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- HIVEP1
- Assembly
- GCA_036785405.1
- Location
- CM072055.1:7129306-7136309[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0002 0.015 16.6 0.5 1 23 144 166 144 166 0.98 2 10 0.0035 0.26 12.7 0.8 6 23 177 196 172 196 0.90 3 10 0.0028 0.21 13.0 0.0 1 20 429 448 429 450 0.94 4 10 4e-06 0.00029 21.9 2.0 1 23 1185 1207 1185 1207 0.99 5 10 8.8e-05 0.0065 17.7 3.3 1 23 1213 1237 1213 1237 0.92 6 10 0.0078 0.58 11.6 0.4 1 23 1615 1639 1615 1639 0.91 7 10 0.00034 0.025 15.9 0.4 3 23 1737 1757 1736 1757 0.97 8 10 1.5e-05 0.0011 20.1 0.9 2 23 1904 1925 1904 1925 0.97 9 10 0.00041 0.03 15.6 1.5 1 23 1931 1955 1931 1955 0.92 10 10 0.0019 0.14 13.5 2.6 1 23 1976 2000 1976 2000 0.93
Sequence Information
- Coding Sequence
- ATGCCGCTTACACAAGAAAAACGCTTGGACAATTTCTCTAACAACAATGACCACAGCTATCTTCATAAGAAGTTCAAGAAAATGGCATCTACTATGGCAATGCTTCCTGGAAGTTCGATCAAAGGAGAAGAAAGTGGATATCAGGGCAACAGCCTTGTACAAGTCACTAGTAGTTCTACTATCACCAACGGAAGTATTGCAGCAGCTCACCctgaaatagaaaaaattaaagataTATACGATAAACGCAGCGTAGATGTGGAAAAAAATGTACAAACTAATTTTAATGATGAAAACTTTAGGTTAAGTGATGTGAATAATTTTGTTCAAATACCTGGTAAAACCAGTTTTgctgaagaatttttaaataagacTGAAAACcttgaaaatgattttataaaagaaacttACAGTGGAGGTACGGGGCGATATATATGCccatattgtaaaatatcatgCGCCAAGCCTTCAGTTCTACAGAAACATATCAGAGCTCATACGAATGAGAGACCGTATCCATGTATACCTTGTGGATTTGCTTTTAAGACAAAATCAAATTTATATAAACACCGAAGGTCAAGAACGCATGCTTTGCGATTGCAAGGTGCAGATATTGCCAGCGCGCTAAACGATGATGAGTTGTCGGGTGATTCCGAAAGTGACACGTCAATACCGCCAGCGTCCTTGTCAGGGTCAGATAGGGATCAGAGCTCGGACACTCCGATGATCCGTTCAGAAAAGAGACCTAATGAGTTCTCCTCGCCAGAACTTACAAATGAAAGTAACAATATTTCACTACATTCGATTTCTACTTTAAATGACAACAACAAATCAAAAGCAATTTACAAACCCAAGTTCAGAGCAGCTTTTTATCATGGAATGGATGACAAAGATAAGATAAAAAAGACTATTTCACAAAATGCTGACTTTCTTACAGAACATATCTCTAAAATTATATCAGATAATGAGGCCATTGTTGATGTTATTGAAACACCTTTACAAAAAAAGTAtggtaaaattaaacaaatcgCAGAAAGTAAACAGCTTTTAAACGATATAGAAATGACTCCAGAATTGGCACCTTTAAATTTAACGAAAAATTGTTACGACACAGACAATGTGACAAGGAAGAGATCACACTCGGATAGTTTTGCACAGATCATTGAAGATCAAAAACATCCACTAAATCCAGAGGGTTCTATAATAAAGGATCTTTTACTTAAAACGAAAGCCAATGGACTTAATCCCCTGACAAGTGAACTAGTTGATAGTTTAGGGCCTCTTTACATTTGCCCTTTGTGTCAAATAGTGTACAGAAGTGCTGATAATTTAGAAATTCATAGGTCGTATTATTGCAAAGGTACCTTAACAAATAATTCAACTGTAGTAACCAGCGCTCAAAAAGAAATCAAAAGTGCAAGGCCTGAGAACATATATGTTAGAAGTAATTCTATTAATGTTCGTTTACCTGAAAATGTCATAAGTCCAGTTTCAAGAATAAATATTACAACTAAGTCACCACCTTTAAAAAACAAACCTGATAATCTTGTAATTTTAAAGCCAGATTGTAACGAGGTGATTGCCCCTTTACCGTCTCCAGGTCCTTTACTTGGTAACACAAGACTTGTGGACACAAGGATACCAtctgaatttaataaaaagacTGAGACATTGAAAATACGGCCTAAGGAATCTAGTCCAAAGCGACGACTTGATAGTAGATCGGAATCATACAGTCCTAGATCATATGATAACTCATCACCTCGCTCAGCTGATTTATATTCTCAACCTAAAATGAGATGTATGGAAATAAATCCATCTTGTTTGAGATCAATGGAAGAAATTTCACCACACGTCAGACATAATTCTACGTCTCTTCAGATGTTTGGAGGTGAAGTAAAAATAGTTGATCATTCTGGAAGTACTACGACTTTACGTATTGAACCCAGTAAAACTCAATTATCTCCAATTTTAATACATCAAAATCTTTCACCTTCAAAGTACGCCAATGATTCAGAAGCAAGCAGCGTTGTTGTAAGATCAGGGCTCCATTCCGGAGGCACAATTGTCCATAACCCTCCTACACCGAAGGAATCTATTAACACGTCACAGATACAAACACCCAGAATATCGGTATCGACACCGGCTGCGCAATTCTTTCAATTTCCGCCACTTAGTGCTATTACAGCATATAATCCTTTGACGCTGCCTCCGCTGAGTCCATCTTCGTCACCTAACGGCCCTACAACTATATTCCACGGCGGCAAGCTCATACCGCATGTCCCAGGAATACCGGGCCCCAATACCCCAGGATTGCTAGTAGGCAATAATAATAcacaattaaaaaacaatgaatGTGTAAAGAATGTGGCAAAGTCAGAGAACATTTCCGATAGTGTATCATACCATATGCATACTGGAAAATCAATTATAAATAACGACAGGGTTATACATTCTAAGAGCCCTCATATAAAACCTTCTCATAATGAAATAGAGAGACATAGCCAAAACAAAGATTTTAACGTAGAAGTACACGGTATTTCCACGGTGccaattataaaaataagacACGTAGATGAGCCCGTTGTTGCAACGTCATATCTGGCAAATAATGATATCAAAGTAACTCTGCGAACTGAGGGTGTTAAAAGAAATGCCGATGGTTTCCCACGAATACCGTTATTGAAAGATAGTCCTAATTACTTATGCATCAAAAAAAATAAGGAGACTAATTTTCAAATTTCCAAAAATGTGAACAGCCTGAAAcctgaaattgaaattaaaaattataatttcgaAAACCTAATAACTAAAGCAGAAATATATAATAACCAAATGCAAAGTTCTTCAGAGATCCAAAATAATTGTAATACCCCAGAAATAAGTGCAACTCTTCAAAACGAAAGATCAGAAACATCGTACTTCCAAAAAAATTCAGCAGCGAAATCACTAAACGACGAAAGAAAACCAAAATTTTTGAGACCATCAACATTGCCTCTAAAGCCTGGAACATTTACTCCGAAAAAACACCACGGAATAACACCCAATGCAAACACAATGCCATTGATATCCCCTGAAACTCCTCGCCCAGCAAAAGCTTATGGACAGCTTTACTTAAATGGCAATGCTTATACGTATTTGGGTTTAAAATGCTCGACTAAGGTTTTTTACTGCACTATAAATCGCCCACAGCCAACATACGTACCGAATCAACATTTCCTATCGATGTACAGTAATTGGCAGTTATTATCTGAGCTGACGCCAGACCCGCTGGGGCTTTCAGCATCGTCTGCTATGTCTCTATATGACTCACGTCATCGACCGCAAAACGTGGCTGTCGCTGTGATTAAACAGGATCTCATATTGACTCATTCATCGCAGTGGAATAAAAATTCGAAGGATAGCAAACAGATTATGCCCTTTATGGACACCAAAAAATCGGAAGAATCAAGAAATAGTGCCGATAACATTGCAACTTCGAAAAAAGAATTAACAGGTGGATTTGAAAGTAATGAAGAATATACATACGTACGTGGCCGTGGAAGAGGGCGTTATGTTTGTTCTGAATGTGGAATTCGTTGTAAAAAGCCTTCTATGTTAAAGAAACACATTCGTACGCATACTGATGTCCGACCATATACATGCGTCCATTGCGTATTTagCTTCAAAACGAAGGGAAATTTAACAAAACACATGAAAAGTAAGGCGCATTACAAGAAATGTTGCGAGTTGGGAATAAATCCAAATGAAGGGAACGACGCCGAGGGTGTAGAAATGGCGCAGTGCTCTGGTGAAACTGACGACGATACTGATTCTGATGGCGACGAGGGAAATGAAGGCGAAACAGAGTCAAGTGaCACAGAGATTTGTAAATCTCGACTTCCAGAACACGAAGCTGCCCACTGTTTATTATCTTTGGGTGGTAGTAGACCGGCTACATCAGCGACCCCTGGATTAATTACTAGTGCCAGACCTACTACTTATCCTTACACTCCTATCTCATTGGAACATGAAGCAGATATTCCTCCAGAGAAACTACAAGACTCTGGAATGGAAGTTGATAACGAGCCAATGGATCTCAGCAAAAATGAATTAAGACCACCAATTAGTGTACCAGAAATACCAACTGCTAGAGAATCCAGTGTGTTAGCATCATTAGCTTCAAATACAGCTAAACTACCTCAACATCAGAGTCAGTGGGTCAACGGAGAACCAATGCTACACACGTATTTAACAGAGAGAGCTTTGCTAGactctaaaataaaacaaagccaGTTAGCCTGTAATCCAAAAACGAGAAAAATCGATTTGGAAAACTCTATGTTTCCTAATAAAGAtagttttgaaaaaaatcaaaagaaaaCCTTTAGTACACCCTCAGTGAAAATAGTTACTACTAGCGAAACTGTAAACAGAGTCCCGCTTACTAAAGATGATAAAACTGTTGCCGAAAATTTACAGAATTCGACAATGATTACGAACAATGAACCGAGACTCAGAATACCAGCTAATCCCCACTTAGAAAACGCTAATCCTATCGAATATTCTCAACATACACGAGTTCAAATTTTGAAAACGTTTGATAGCTCTCTAGAACGTAATAGAGAAATAAAGGGAGACGAAAGTAACATGAGTAAGATTACCGTTGatgacaaaacaaaaaaagatgAGAATTTAGaagtaaatgaaataaaaccgTCCCCTTCAGAATATGATTCTGGGACGTCTGTTGTTGATGGGACGGATTTCGACGGTACGTCTAATACATCCGTAAAACAGTTGGAAGATGATCGGCGTGTTTGTTACTTTTGCAATGAAACCTTCACTAAACCACCCAGGCCATTTAGGTGTGTTGTATGCGCTGTAAGTTTTCGAACGAGAGCTCATTTGTTGGTACACGAGCGCTCAGcttctcataatattaaattatctatgacaTCAAACTCAGAAAACGCTAAACACGTGGTATCGGAATATTTAAAACATTCCCGAGTAACTCCCACGAACTGTCCCGATGATTCTGTACAAAATCGACCAGATGTTAGTGATGAAGGTAATAGAAATAGGGTACCTACGGAAGAAAAAGCGAGATCAGACGATAGTTTTGAAAGTGACTTGGTAAAATATCCTGTATTAGAATATGAGAATGTGGGTCCTAACGATGAAACTGATAGAAAAGAATTCGAAACGGAAGATGAATGGAAGGATTGtgatttttgtaacaaaatgtTCAGAGAGCCAGAGCAACTGAAATTGCATCTCAATATACATTACATGGAGAGACCGTTTAGATGCAGCGTGTGCGCCGTTAGCAATCGTACGATAGCTCACCCCCAGGCACAAGAGCGCTCGGTCTATCATAATAGTAAAGTTATGAATAAACCTAATTCAGAAAACGCCAAACACGTTGTTTCGGAATATTTAAAGCATTCCCGAATAAATCCTACTAAAACTCACGACGATCCTTTACAAAATCACCCAGATGTACCAAGCGACGAGAGCAATGGAAGTAAGTCCATGTTGGAAGAAAAAGCAAAAATGGACGACAGTTTGGATGGGGACGGGATTAAGTTACCTCCAAATGAATACGATTCCGTAGCACCTAAAGTTGTAATAGGGGTTGGAGGTGTAGCGTTCAAAATAACTAAAGGAAAGGATCTCGAAGGCGGGTCGTACTCTCCCGGGAAACTTATGGAAGATGGACGAAGAGTTTgtgatttttgtaataaaactttTACGAAACCGTCACAGTTAAGATTACATCTGAATATACACTATATGGAGAGACCGTTTAGATGTAGCGTGTGCGCTGTTAGCTTCCGAACGAGAGGTCACCTTCAAAAACACGAGCGCTCAGCCTCTCATCATAATAAAGTTTCAATGACCTCTACGTTCGGAGCGGCGACATCGTTCAATCCACGACCTTTTCGCTGTTCAGATTGTAACATAGCATTTAGGATACATGGACATTTAGCCAAACATCTTAGAAGCAAAATGCACGTGATGCGTCTAGAGTGTTTGTTTAAGCTACCGTTCGGCACTTTCACCGAGATAGAACGAGCAGGCCTCAGCTTAACGGACATCGACACGACGGACTGCGCCAGTTCGCTAGCCAGCCTCCAGTCGCTCGCGAGGAAGCTCCACGAAAAAGACCCCACGAAGCTGGAGTACCGAGAGCCGAGTGGTTCCTTGCCGGCACTGCCTCCGACCGGCAGGGACTCCTCCGAAGAGGAAGACGCGGGCGCGCTGGCAGAGAAGACGTGTGATGGTGTAAATGATAACGAGATAAAcactattgaaaataataaaggtTACGATACTGAACTAAGAGTTAATTATAGTGCCACAGATAATTAG
- Protein Sequence
- MPLTQEKRLDNFSNNNDHSYLHKKFKKMASTMAMLPGSSIKGEESGYQGNSLVQVTSSSTITNGSIAAAHPEIEKIKDIYDKRSVDVEKNVQTNFNDENFRLSDVNNFVQIPGKTSFAEEFLNKTENLENDFIKETYSGGTGRYICPYCKISCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTKSNLYKHRRSRTHALRLQGADIASALNDDELSGDSESDTSIPPASLSGSDRDQSSDTPMIRSEKRPNEFSSPELTNESNNISLHSISTLNDNNKSKAIYKPKFRAAFYHGMDDKDKIKKTISQNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQLLNDIEMTPELAPLNLTKNCYDTDNVTRKRSHSDSFAQIIEDQKHPLNPEGSIIKDLLLKTKANGLNPLTSELVDSLGPLYICPLCQIVYRSADNLEIHRSYYCKGTLTNNSTVVTSAQKEIKSARPENIYVRSNSINVRLPENVISPVSRINITTKSPPLKNKPDNLVILKPDCNEVIAPLPSPGPLLGNTRLVDTRIPSEFNKKTETLKIRPKESSPKRRLDSRSESYSPRSYDNSSPRSADLYSQPKMRCMEINPSCLRSMEEISPHVRHNSTSLQMFGGEVKIVDHSGSTTTLRIEPSKTQLSPILIHQNLSPSKYANDSEASSVVVRSGLHSGGTIVHNPPTPKESINTSQIQTPRISVSTPAAQFFQFPPLSAITAYNPLTLPPLSPSSSPNGPTTIFHGGKLIPHVPGIPGPNTPGLLVGNNNTQLKNNECVKNVAKSENISDSVSYHMHTGKSIINNDRVIHSKSPHIKPSHNEIERHSQNKDFNVEVHGISTVPIIKIRHVDEPVVATSYLANNDIKVTLRTEGVKRNADGFPRIPLLKDSPNYLCIKKNKETNFQISKNVNSLKPEIEIKNYNFENLITKAEIYNNQMQSSSEIQNNCNTPEISATLQNERSETSYFQKNSAAKSLNDERKPKFLRPSTLPLKPGTFTPKKHHGITPNANTMPLISPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVAVAVIKQDLILTHSSQWNKNSKDSKQIMPFMDTKKSEESRNSADNIATSKKELTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCVFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNDAEGVEMAQCSGETDDDTDSDGDEGNEGETESSDTEICKSRLPEHEAAHCLLSLGGSRPATSATPGLITSARPTTYPYTPISLEHEADIPPEKLQDSGMEVDNEPMDLSKNELRPPISVPEIPTARESSVLASLASNTAKLPQHQSQWVNGEPMLHTYLTERALLDSKIKQSQLACNPKTRKIDLENSMFPNKDSFEKNQKKTFSTPSVKIVTTSETVNRVPLTKDDKTVAENLQNSTMITNNEPRLRIPANPHLENANPIEYSQHTRVQILKTFDSSLERNREIKGDESNMSKITVDDKTKKDENLEVNEIKPSPSEYDSGTSVVDGTDFDGTSNTSVKQLEDDRRVCYFCNETFTKPPRPFRCVVCAVSFRTRAHLLVHERSASHNIKLSMTSNSENAKHVVSEYLKHSRVTPTNCPDDSVQNRPDVSDEGNRNRVPTEEKARSDDSFESDLVKYPVLEYENVGPNDETDRKEFETEDEWKDCDFCNKMFREPEQLKLHLNIHYMERPFRCSVCAVSNRTIAHPQAQERSVYHNSKVMNKPNSENAKHVVSEYLKHSRINPTKTHDDPLQNHPDVPSDESNGSKSMLEEKAKMDDSLDGDGIKLPPNEYDSVAPKVVIGVGGVAFKITKGKDLEGGSYSPGKLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSASHHNKVSMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGLSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPSGSLPALPPTGRDSSEEEDAGALAEKTCDGVNDNEINTIENNKGYDTELRVNYSATDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00354409;
- 90% Identity
- -
- 80% Identity
- -