Basic Information

Gene Symbol
-
Assembly
GCA_036785405.1
Location
CM072078.1:10297757-10316651[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.79 59 5.3 0.0 1 23 150 172 150 172 0.98
2 14 0.18 13 7.3 2.1 1 23 179 201 179 201 0.97
3 14 3 2.3e+02 3.4 0.1 1 23 205 228 205 228 0.94
4 14 1.8e-05 0.0013 19.9 1.7 1 23 233 256 233 256 0.94
5 14 0.089 6.6 8.2 0.9 2 23 263 284 262 284 0.96
6 14 0.00013 0.0099 17.1 0.9 2 23 297 318 297 318 0.96
7 14 0.0026 0.2 13.0 1.8 2 23 325 346 325 347 0.95
8 14 0.00027 0.02 16.2 0.3 2 23 356 378 355 378 0.97
9 14 0.0044 0.33 12.4 2.1 1 23 385 408 385 408 0.94
10 14 0.043 3.2 9.2 0.1 6 23 418 435 417 435 0.97
11 14 0.44 32 6.1 0.1 2 11 445 454 444 458 0.85
12 14 2.1 1.6e+02 3.9 0.0 7 23 2383 2399 2379 2399 0.91
13 14 1.6e-05 0.0012 20.0 0.2 2 23 2409 2430 2408 2430 0.96
14 14 5.6e-06 0.00042 21.5 1.4 1 23 2435 2458 2435 2458 0.97

Sequence Information

Coding Sequence
ATGGCTGCAGAAGTGCAAATAAAAACTGAACCAGAAGAGACTGAAACCAATGAAGAAAAACCTGATTTGAGTACGGAACAGCCTGACTTTGCACTGAATCCAATTTTTGGTGACCAATTCGTTGGGATTAAGCAAGAGGTGACAGATGGAAATGTAAAATTGGAGCCAGTGGAAGATCCTGATGATGCATCCGAAGGACACATGGAAGATAGTGATGCTAGTGATGCATATGAAGGGCACATGGAAGATCCTGATGATGAATATGAAGAACACGACATAGATCCAGAGAATGTATTGATGAAGTTTGAACACCATTTATATGAAAGTAAAGACGAAAAGACGTATCCGGAGGAAATAATGTGTCAGATAGACATAGTGACGATAGACGAAAAAGCGCGCCAAGAAGAGTACCACTTGAATTTGGTATCACGGAAACAAAACATGAACTACACTTGCGACTCATGCGCGCTTGGCTTCGTCGTGCTGGAGGCGTACCAGATGCATCTAAAGGTTCACTCTCCAGAAGCGGGAGAGCACGAGTGTGACATATGCAAAGTCCGTCTGAAGACCACGGACATGCTGTACCAGCACAGACTGCGGCACTACCGCCGCTACCGCTGCACCATATGCCAACTGCTGCAACGGGATAAGGACACGGTGGCGGCGCATATCATGAGCGAACATTTGGGGACCGCGTTTTTATGCAAGTACTGCGGCAAGGATTTCAAACGGCCCCAGTACCTCAGTCGGCACATCAAACAAATGCACACCAAACCGCTGCACCTGGAGTGTCCTGTCTGTCAGAAGGTGTACTACGAGAAAGGCTGGTATCGATGTCATGTTAGAACTCACAACCAGCAAGTGCAGAACAACATGACGCGCAAGGCGGTGTGCGCGCACTGCGGCCGCGAGTTCCGCAACAAGCAGTACCTGCTGCGGCACCTGGCCGTGCACGAGGACCGGCGCGCCAGGACCTGCGGCGAGTGCGACAGGACCTTCAAGAACATCGAGGTGCTTCGCGTTCACAGGCGGCAGCACCACGGGCGCAACCCCATACGGAACACGACTTGCCCGGTGTGTTCACGCGTTCTCACCACGCCGGCGATGATGACGCGGCACATGCGGCGAATGCACACAGAACGAGTTAAAAGATTCGAATGCGACTACTGCCAGAAGTGCTACTTCACGAAGGCGGAGGTGCGGTCGCACATCGAGTGGACGcacctgcggcggcggcgacaCGCGTGCGCGTGCGGGCGCGTGTTCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACCAGTCGTGTGCGGCGGCAGGCGCGTGTTCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGTCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGGTGAGTCGTCGCTAACACCTACcagtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGtcgtgtgcggcggcgggcgcgtgttCCGCTCGCCGGCGCTGCTGCGAGACCACTCGCTGCGGCACCTCAACGTGCAGCAGCCCAGGGACAAGAGCTGCCCCATTTGCGGGAAGATGTTCGCGAACCAGCAAGTGTTGACGCGACACATAAAGGGCCACTCAGGGGAGACCTACCCCTGCAGTGAATGCGGGAAGACCTTCAAAACGCAGTCCTACGTCAAAATACACTACAAAATCAAACATCTAAACATGACGAGGGCGCAAATCAAAGCGCAGAGTAAAAGAAAACTGATCATGCTTGAAAACAGCGAACGTGAAATGAGCGCGAAGATCAAAGTTAGTAAGAAATCTAAGAAAGATACAGAAGATCCATTGAATTTGGATAATTTTCAATCTGGGACACCAGAGACGGAATTTGTTAGTATAAAGAAAGAGGTGATGGATCCTTCGGTGCCGCTTTTTGAGACGTTCGTTGATATACAGAGAGAGTGTTGA
Protein Sequence
MAAEVQIKTEPEETETNEEKPDLSTEQPDFALNPIFGDQFVGIKQEVTDGNVKLEPVEDPDDASEGHMEDSDASDAYEGHMEDPDDEYEEHDIDPENVLMKFEHHLYESKDEKTYPEEIMCQIDIVTIDEKARQEEYHLNLVSRKQNMNYTCDSCALGFVVLEAYQMHLKVHSPEAGEHECDICKVRLKTTDMLYQHRLRHYRRYRCTICQLLQRDKDTVAAHIMSEHLGTAFLCKYCGKDFKRPQYLSRHIKQMHTKPLHLECPVCQKVYYEKGWYRCHVRTHNQQVQNNMTRKAVCAHCGREFRNKQYLLRHLAVHEDRRARTCGECDRTFKNIEVLRVHRRQHHGRNPIRNTTCPVCSRVLTTPAMMTRHMRRMHTERVKRFECDYCQKCYFTKAEVRSHIEWTHLRRRRHACACGRVFRSPALLRDHSLRHLNVQQPRDKSCPICGKMFAGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRQARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELSHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRGESSLTPTSRVRRRARVPLAGAAARPLAAAPQRAAAQGQELPHLREDVRVVCGGGRVFRSPALLRDHSLRHLNVQQPRDKSCPICGKMFANQQVLTRHIKGHSGETYPCSECGKTFKTQSYVKIHYKIKHLNMTRAQIKAQSKRKLIMLENSEREMSAKIKVSKKSKKDTEDPLNLDNFQSGTPETEFVSIKKEVMDPSVPLFETFVDIQREC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-