Carc014753.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- -
- Assembly
- GCA_036785405.1
- Location
- CM072068.1:17064694-17071836[-]
Transcription Factor Domain
- TF Family
- THAP
- Domain
- THAP domain
- PFAM
- PF05485
- TF Group
- Zinc-Coordinating Group
- Description
- The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 5.3e-11 1.5e-08 36.1 0.3 1 84 278 356 278 359 0.85 2 12 0.032 9 8.0 0.0 49 84 377 408 361 411 0.77 3 12 0.019 5.4 8.7 0.0 49 84 429 460 414 463 0.73 4 12 0.019 5.4 8.7 0.0 49 84 481 512 466 515 0.73 5 12 0.019 5.4 8.7 0.0 49 84 533 564 518 567 0.73 6 12 0.033 9.3 7.9 0.0 49 84 585 616 570 619 0.78 7 12 0.019 5.4 8.7 0.0 49 84 637 668 622 671 0.73 8 12 0.04 11 7.7 0.0 49 84 689 720 674 723 0.75 9 12 0.067 19 6.9 0.0 49 84 741 772 725 775 0.73 10 12 0.038 11 7.7 0.0 49 84 793 824 777 827 0.74 11 12 0.038 11 7.7 0.0 49 84 845 876 829 879 0.74 12 12 0.038 11 7.7 0.0 49 84 897 928 881 931 0.74
Sequence Information
- Coding Sequence
- ATGGAACTGGCATGTGAAACATCATTAGGATTACattccaaatttttatgtacttgcTTGTCATGTACGATCGAATGTAATGAGAGCAAGAAAAAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCGTCGCTGAGCCAAGGGCGTCGAGCGGAATTGTTCTAGAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCGTCGCTGAGCCAAGGGCGTCGAGCGGAATTGTTCTAGAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCGTCGCTGAGCCAAGGGCGTCGAGCGGAATTGTTCTAGAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCGTCGCTGAGCCAAGGGCGTCGAGCGGAATTGTTCTAGAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCATCGCTGAGCCAAGAGCGTCGAGCGGAATTGTTCTAGAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCGTCGCTGAGCCAAGGGCGTCGAGCGTAATTGTTCTAGAATCGTCGCTGGGCCCTTGGGCGCCGAGCGGTGAAATCTTCGCTGAGCCAAGGGCGTCGAGCGGAATTGTTCTAGAATCGTCGCTGGGCCTGTTGGCACCGAGCGGAAGACTGCGGGAATTATCAGAGAGGGCCGCAAATCCTCCCGAGGGTTCTGAGGCACCGCAAGGGGAACCTGAGCCTGAGCCTGAGCCTGAACCTATTCCAGAGCCGCGCAAAGCGTTCAGAGTACCCTCGCCTTCGGAGTTGACTGAAGGaagAGGGAAGCGGTCCTGCAGTATCCAGCAGTGCGCCTTCAGGAGCTGCCCGACCAACGACACGCCCGACCTTCGCAACGACGTCACTTTGTTTCGGTTCCCTAAGGTATTTTCCGCAAGCCAAAAATGGGCGCGCACCGTGTCCCGCGAGAGGGGAGAGCAATTCGCGCCACAGTTCAACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGATACCTACGTCGACAGCAGCGGGAACATCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATTGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGATACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGCGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGCGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGCGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGATACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGCGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGAGACCTACGTCGACTGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGAGACCTACGTCGACAGCAGCGGGAACACCGCCCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCATGTGTCACAGCGTGGTCTGCGCGCTGCACTTCCGCACGTGCGAGACCTACGTCGACAGCAGCGGGAACACCGCGCTGCTGCCGAACGCGCGCCCCCGCCCCGAGCCCTACACGCAGGTGATCGCACTCGCCACACTACCACCCGGTGACGGCAGCGGACACACCGCGgAAGAACAAGAAAAAGAGAATGAATTGTTCGAGAAATTGCGAGAAGAAATAgcgaaaagaaaagagaaaggCGAGGAAGAACAAAAAAAGCGGCCACGAAAAAGTAAAGAAGTAGTCAAAGGTAATGAGGAAAACGAGAGCGTAATAAAAAAGCGGCCAAAGAAAAGTAAATATGTGAAGAGGCAAGAAGAAATAGCGAAAAGAAAACAGGAAAGGGAGAGAGAAAAGAAGAGAATGAGAGAAGAAAAAAAACGAGCAAGAAAAAGTAAAAAGACAGCTGAGGTTGTACTTCCGAGTTTTGTGCCGGAAATGCCAAATTTGGAATTATACAACGAATTAAATACAGCAGTGGATAGTTTTGGAAATACATTACCAATAGAACGAAACCCATTAAAGATTGAAGCGAAAACAGAATTGGAAAGAGCAGTTCAAAGTATAGCAACTGAACTAAAGCCACCGGAAAACGCAATAACGTTACAATACCTCGATTTGTATAGCGAAAGTGCGACCGTGCATTACTTGAGTGTAGACTCGGGGAACATAGTGAACGTGGGACACACGCAAGTTAACATACAAAAGGACAATATAGCTACTTTAAACTATGTGGACAGCGATAATACAGTAAAACATACTTTACGGTGTGTCAACATAGAACATGATCCATCGATGTCTGCTTTAACGGAAAATGACACGAGTGCAAACGATATTGTACTGAAAACAGAAGCTCCGGGCACCAATCCACCTGACATAAGTGATTCAATTAATTTGTTTACTGATAATCCTTCAATAAGTAAATGTATCATCAAAGAAGAACCTATGACCAATGATGAAAGTGATCCGAATGTGACGAACGGTGAAACGATTGTTGAAGTTAATGAAGGAACGATAAAGATAGAAAATGAAAGTGAACCGAATGTGACGAACGATGAAACGATTGTTGAAGTTACTGAAGGAACGATAAAGATAGAACGTGAAACTGATGAAAGTGACAGTGAAACGGTGGTCAAAATGGAAATCGAAGAGTTTGACGGACAAGTGTTTAAATTAATCTAA
- Protein Sequence
- MELACETSLGLHSKFLCTCLSCTIECNESKKKSSLGPWAPSGEIVAEPRASSGIVLESSLGPWAPSGEIVAEPRASSGIVLESSLGPWAPSGEIVAEPRASSGIVLESSLGPWAPSGEIVAEPRASSGIVLESSLGPWAPSGEIIAEPRASSGIVLESSLGPWAPSGEIVAEPRASSVIVLESSLGPWAPSGEIFAEPRASSGIVLESSLGLLAPSGRLRELSERAANPPEGSEAPQGEPEPEPEPEPIPEPRKAFRVPSPSELTEGRGKRSCSIQQCAFRSCPTNDTPDLRNDVTLFRFPKVFSASQKWARTVSRERGEQFAPQFNSVVCALHFRTCDTYVDSSGNIALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCDTYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTRETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTRETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTRETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCDTYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTRETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCETYVDCSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSMCHSVVCALHFRTCETYVDSSGNTALLPNARPRPEPYTQVIALATLPPGDGSGHTAEEQEKENELFEKLREEIAKRKEKGEEEQKKRPRKSKEVVKGNEENESVIKKRPKKSKYVKRQEEIAKRKQEREREKKRMREEKKRARKSKKTAEVVLPSFVPEMPNLELYNELNTAVDSFGNTLPIERNPLKIEAKTELERAVQSIATELKPPENAITLQYLDLYSESATVHYLSVDSGNIVNVGHTQVNIQKDNIATLNYVDSDNTVKHTLRCVNIEHDPSMSALTENDTSANDIVLKTEAPGTNPPDISDSINLFTDNPSISKCIIKEEPMTNDESDPNVTNGETIVEVNEGTIKIENESEPNVTNDETIVEVTEGTIKIERETDESDSETVVKMEIEEFDGQVFKLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -