Carc001522.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- CSRNP3
- Assembly
- GCA_036785405.1
- Location
- CM072056.1:5712006-5714141[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.47 1.5e+04 -3.6 2.8 71 111 34 75 4 93 0.61 2 3 1e-100 3.4e-96 322.2 7.1 2 217 197 404 195 405 0.94 3 3 0.066 2.2e+03 -0.8 0.7 55 103 412 461 403 493 0.50
Sequence Information
- Coding Sequence
- ATGGCAGAAGAACAAAATAAATCTAACACTAAAGACTCTCCAGTGTTAGTGGAGGAAAAAGAATGTGAATCTGTGATAAGAGACGAGAAATGTAGTGACAGTGACGCTAACAGTGAATACCTTAGTTGTAATGATGAACAAACTAACACTAATAGTAGTAGCTCTCCGTTCTACGAGAGCAGTGATAGTAAAGTAGATTATGCTGTTAAGTTAGATGACAATGATACTTTAAGTGATGTAGATGACATTAAAACAGACACtgcatcagcagacagtgaagATTCTGCACTGGGCAGTCTTCCTCCTGATGGAGCACTCAACGACAGAGAAGAATACGCTCCAGATAGGTCTGATGGCAGCGACTCAGGACTGGGGTCTGAATCACCAGAAGATGTTAAACAACCGAGCTTTAATATAGAACTACCAGCTGGTAGTGAGGAGAAGGTTTTGATACCAGATACTTCTTTACCTAGCAGTAGCCAAGAAAATGTGGACCAGAATTCTATTACAGTAATAAAGAAACCCCAAAAAAGTAACCTTAAAAGAAAAAGTGAGGAGGCCCAGGAAAATGAACcacaacaaaaaagaaaaaagcctAGTATACAATTTGATAGTGTAACTGTCTTTTATTTCCCAAGGGCCCAAGGCTTTTCTTGTGTTCCATCACAGGGTGGCTCAACATTGGGCATGGAATGGGAACACAGCCATATTCAGAAATTCACTCTGCCAGAACACGCAATGGAACAAAGGCGATTGCACAGGCAGGTTTTGCAGCAATTAAAAAGTGAACGACATTTGCTGCAGGGCGTGTCTCTTTCCTCGAGTGAAGATAGTGACACAGAAGAGGAAGCCAGTGACATATCTGAATCCGAATTAGATTTagacagttattattttttgcaaCCAGTACCAACAAGACAAAGGCGAGCATTATTGAGAGCAGCTGGAGTAAGGAAAATTGAAGGCTACGAGAAAGATGAATGTCGGGACATAAGGACTTCTCGTGAATTTTGTGGGTGTGCTTGCAAAGGTGCATGCAACCCGAACAACTGCTCATGTAGTTTGGCTGGCATTAAATGTCAAGTGGACAGATTAAACTTTCCCTGTGGATGCACCAGGGAAGGTTGCTGTAACACTACTGGAAGGGTTGAGTTTAACCCAATGAGGGTAAGAACACACTTCATTAACACTCTTATGAGAATAGGTCTCGAGAGGAAGAATGAAGAAAGCCAAGAGGCTGCGAAGAGAAAATGGGCGGAAGCGCACAATACAAACGCTTCTTCAATTTCAGCCTCTCAatcaaatttgtatgaaaaagaaaattgccACAGCCACCAAGAGGCCGTAATATGTAACACTAACCTACAAAAATCGGCAATGGATTCCTGCTTAAACACTTTCGATAATATGAACCATAATATAAACGCACCCAATAGCGCGGCAAACGACGCATTTGCCTTCAGAAATGAGGCAGTAGAGCATAGAAATTTGCAAACTAACACGTTGGGTTTTGAAAGTAAATCTGAGCACCATACACACAATCTGTACACGTCAAACATTTTACAAGGGAAAGGGCCCCCTTATTCAGGAGCAAACACAATGGAATTCAACTCATTGTCAAATAACATGCAAAGATATACATGCGATCTCAGTTATTCCTATGACCAGCAGTTTAAGAGTTTGCAAAATATATCTGCTTCTAGTTTTGAAGAGTTTGCACATAGCTCGCACATATCTATGCTGAATCAATACGGTCACATGTATGATTATATGCATAAACCTAGTACCAGCATGACCGAGCATGCTGCTATGCAGTACCAAGCTATGCCTCTCCACTACGAAATGTACAAAAATGCGCCGGAGTGTGTAAATGCTGAAAAAGCTGACACTCACTATACTACTTTAGTCACAATGCCATATCAGCAAAGCAACAAGTTGCAAGCTGTCGAGAACGATGAAAATTGGTTTAGCCAAAATACCCTGCTGAACTTGGACCAATCAGTGGAGGTAGCTCAAGAAATACCAGCCGCCCAACCTGAGCAGGCAGCAAGCCAAGCCGAAGGTGAAACAAGTGACACAACTGAAAACTTTGGtgaacttataaaaaaaactatggtaGAATCTGTTACAGTGTAG
- Protein Sequence
- MAEEQNKSNTKDSPVLVEEKECESVIRDEKCSDSDANSEYLSCNDEQTNTNSSSSPFYESSDSKVDYAVKLDDNDTLSDVDDIKTDTASADSEDSALGSLPPDGALNDREEYAPDRSDGSDSGLGSESPEDVKQPSFNIELPAGSEEKVLIPDTSLPSSSQENVDQNSITVIKKPQKSNLKRKSEEAQENEPQQKRKKPSIQFDSVTVFYFPRAQGFSCVPSQGGSTLGMEWEHSHIQKFTLPEHAMEQRRLHRQVLQQLKSERHLLQGVSLSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGACNPNNCSCSLAGIKCQVDRLNFPCGCTREGCCNTTGRVEFNPMRVRTHFINTLMRIGLERKNEESQEAAKRKWAEAHNTNASSISASQSNLYEKENCHSHQEAVICNTNLQKSAMDSCLNTFDNMNHNINAPNSAANDAFAFRNEAVEHRNLQTNTLGFESKSEHHTHNLYTSNILQGKGPPYSGANTMEFNSLSNNMQRYTCDLSYSYDQQFKSLQNISASSFEEFAHSSHISMLNQYGHMYDYMHKPSTSMTEHAAMQYQAMPLHYEMYKNAPECVNAEKADTHYTTLVTMPYQQSNKLQAVENDENWFSQNTLLNLDQSVEVAQEIPAAQPEQAASQAEGETSDTTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00354095;
- 90% Identity
- iTF_00354095;
- 80% Identity
- -