Carc020610.2
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- Smarcc1
- Assembly
- GCA_036785405.1
- Location
- CM072075.1:6279409-6300836[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-14 5.1e-11 43.3 0.1 3 44 1637 1678 1635 1680 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCGGGCGGCGCGCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCACGCAAGGACCTGAACGTGCAAATGATGATGGACATCGAGTCGTCGCTGCTGACCGCGGAGGTCATCCGCTCGCCGTGCATCTACATACGGCCCGACGTGGACAAGGCCACGGCGAACAAGAACCCGTCCCGCAAGGACCTGAACGTGCAAATGATGATGGACATCGAGTCGTCGCTGCTGACCGCGGAGGTCATCCGCTCGCCGTGCATCTACATACGGCCCAACGTGGACAAGGCCACGGCGAACAAGAACCCGTCCCGCAAGGACCTGAACGTGCAAATGATGATGGACATCGAGTCGTCGCTGCTGACCGCGGAGGTCATCCGCTCGCCGTGCATCTACATACGGCCCGACGTGGACAAGGCCACGGCGAACAAGAACCCGTCCCGCAAGGACCTGAACGTGCAAATGATGATGGACATCGAGTCGTCGCTGCTGACCGCGGAGGTCATCCGCTCGCCGTGCATCTACATACGGCCCGACGTGGACAAGGCCACGGCGAACAAGGTCAAGGACATCATCGTGAACCACCAGGGAGAGATATGCGAAGACGAAGAGGACGCGACACACATAATCTACCCGACGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTCCGGCGCGGCGGGAGCGTGCTGGTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGTGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCAAGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTACGTCCTCTACACATTATCTACCCGGCGGTGGACCCGCACGAGGAGGAGTACGCGCGGCCGGTGTTccggcgcggcggcagcgtgctggTGCACTGGTACTACTTCCCCGACAGCCACGACACCTGGGCGCAGGCCGACCTGCCGGTAGACGTGCCGGAGACGGTGAGCTGGGAGTGCACGCGCGCGGAACCGTGGCGTGTGTCGGCCACGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAATGAGGAGGACTACGAGGTCGACGCGAACGGCAAGAAGAAGGTACATAAATTGCGTCTTTCGGTCGACGATTTACTCCCCGGAGCGGAGCCTTCTAGCAAAGGCAAGAAAGGAAAGAGGAAGCGGtcgccgtcgccgccgccgcagaAACACAGCAAACGGAAGGGGCGTATGACAAAACGTCGTGAGAACGATGCTGAGGATGAAGAAGACAACGCGTCGAGGGACAACACGGACGTCGCGCCCACGCCGGAGAGCGAGCGCTCCACGGAAACCCCCGCGCCTCCCCCGGCAACTACCAGCGCAGCTccccccgcgcccgccgccgagccgccgcccgcgcccgtcagcgaggcgcccgccacgcccgcgcccgccatggACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGACATGCTCATCAAGGAGGAACTGGAGGACAACGTGACGGACCAGACGCACCACATCGTGGTCCCCTCGTACTCCGCGTGGTTCGACTACAACTCCATCCACACCATCGAGAAGCGCGCGCTGCCGGAGTTCTTCAACGGCAAGAACAAGTCCAAGACGCCCGAGATCTATCTCGCTTACAGGAACTTCATGATCGACACGTACCGCCTGAATCCCACGGAGTACCTGACGAGCACGGCGTGCCGGCGGAACCTGGCGGGCGACGTGTGCGCCATCATGCGCGTGCACGGCTTCCTCGAGCAGTGGGGGCTCGTCAACTACCAGGTGGAGACGGAGTCGCGGCCGACCGCAATGGGTCCGCCGCCGACTTCACACTTCCACGTGCTGTCCGACACGCCGTCGGGCCTGCAGCCGCTGCAAGCGAGGCCGACGCAACCCAGACCTGCCGAAAACGCAGCAGTGCCGAAGGTTGAAGCTGGTCTGCCGAACGGAACGGAAGCCGGCGCGCCGGTCAAAACCGAACCGCCACCGGTCAAAGCGGAGCCGCCCATTGAACTCGGCACCGCGCCTGGACTCAAACTTGATCAGTACCGAGGTGGTGCTCGCGGTCGCGAGTGGACGGAGCAAgagacgctgctgctgctggaggCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCTCGCGCACCCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGACCCCTACTTGAACGACTCTGCTTCTGGTGAGGAATCTCCGCAACATACATga
- Protein Sequence
- MKVFMDMKPGGALCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMDIESSLLTAEVIRSPCIYIRPDVDKATANKNPSRKDLNVQMMMDIESSLLTAEVIRSPCIYIRPNVDKATANKNPSRKDLNVQMMMDIESSLLTAEVIRSPCIYIRPDVDKATANKNPSRKDLNVQMMMDIESSLLTAEVIRSPCIYIRPDVDKATANKVKDIIVNHQGEICEDEEDATHIIYPTVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWVQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSQDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVRPLHIIYPAVDPHEEEYARPVFRRGGSVLVHWYYFPDSHDTWAQADLPVDVPETVSWECTRAEPWRVSATWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLLPGAEPSSKGKKGKRKRSPSPPPQKHSKRKGRMTKRRENDAEDEEDNASRDNTDVAPTPESERSTETPAPPPATTSAAPPAPAAEPPPAPVSEAPATPAPAMDAHDDSQGKHSDSNTQDMLIKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQVETESRPTAMGPPPTSHFHVLSDTPSGLQPLQARPTQPRPAENAAVPKVEAGLPNGTEAGAPVKTEPPPVKAEPPIELGTAPGLKLDQYRGGARGREWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLNDSASGEESPQHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -