Carc011512.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- -
- Assembly
- GCA_036785405.1
- Location
- CM072065.1:13730906-13745019[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 3.7e-08 5.1e-05 24.1 0.0 3 41 80 118 78 121 0.95 2 17 3.6e-08 5e-05 24.2 0.0 3 41 127 165 125 168 0.95 3 17 3.4e-08 4.6e-05 24.3 0.0 3 41 174 212 172 215 0.95 4 17 4.6e-06 0.0063 17.4 0.0 3 40 221 258 219 259 0.95 5 17 0.00016 0.21 12.5 0.0 4 41 303 340 300 342 0.89 6 17 1.5 2.1e+03 -0.2 0.0 27 41 375 389 366 392 0.85 7 17 5.1e-07 0.0007 20.5 0.0 3 41 398 436 396 439 0.95 8 17 5e-08 6.8e-05 23.7 0.0 3 41 445 483 443 486 0.95 9 17 3.4e-08 4.6e-05 24.3 0.0 3 41 492 530 490 533 0.95 10 17 3.4e-08 4.6e-05 24.3 0.0 3 41 539 577 537 580 0.95 11 17 3.4e-08 4.6e-05 24.3 0.0 3 41 586 624 584 627 0.95 12 17 6.1e-05 0.083 13.9 0.0 3 41 633 671 631 674 0.94 13 17 3.4e-08 4.6e-05 24.3 0.0 3 41 680 718 678 721 0.95 14 17 2.5e-07 0.00035 21.5 0.0 3 37 727 761 725 766 0.93 15 17 3.3e-08 4.5e-05 24.3 0.0 3 41 774 812 772 816 0.95 16 17 3.3e-07 0.00045 21.1 0.0 3 41 821 859 819 864 0.93 17 17 8.5e-08 0.00012 23.0 0.0 3 41 868 906 866 909 0.95
Sequence Information
- Coding Sequence
- ATGCAGCTAGTGTTGGACACTGTAATAGTGTCCAACACTAGCTGCATTTCCTCGTTTAACAGCATCAAGGAAAGCCCCGGAGCCACCGAAAAAACCAGAATCAGCTCCCGTGCCACAAGTCAAGCTGGGGCCGTCATAAAGCCAACTGAAAGCGGTCGCAAAGTGACCTCAGTAGTGCACGAAGCCGCCTGCGTTCCCGGCGAAGAGAACAAGAAACGCAGCCGGAAGCGCTGCCCGAACTGGACCCACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcactgacttcaccctcatgacggagctgttccccggccgctccaggaagaatctcaaactgaagCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAAGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTCTACCGCACGCTCGTTGCGCTGGGCACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGGAGCTGTCGAAACCCCTGAAACATCCTCGCTCGTTCAATGAGAAGGTTGCGGATTGGCAGTCTTCATATGGAGTTACAGACGCGAAGTTATGCAGTGCTGCGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACAACGTGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGGTATGTAGCGACGCAGCCGCAAGCGCTGTCCGAGCTGGACCGACGACGAGACCGTGCGCTTCTACCGCGCGCTCCGCGCTCGGCACTGACGTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCGCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCTGAGCTGGACCGACGACGAGATCGTGCGCTTttaccgcgcgctcgccgcgctgggcactgacttcaccctcatgacggagctgttccccggccgctccaggaagaatctcaaactgaagCGACGCAGCCGAAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGAAAGCGCTGCCCGAGCTGGATCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCACTCCAGGAAGAATCTAAAACTGAAGCGACGCAGCCGAAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATTTCAAACTGAAGcgacgcagccgcaagcgctgcccgagctggaccgacgacgagaccgtgcgcttctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGCGACGCAGCCGCAAGCGCTGCCGGAGCTGGACCGACGACGAGACCGTGCGCTTctaccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCACTCCAGGAAGAATCTAAAACTGAAGCGACGCAGCCACAAGCGCTGCCCGAGCTGGACCGACGACGAGACCGTGCGCTTctgccgcgcgctcgccgcgctgggcACTGACTTCACCCTCATGACGGAGCTGTTCCCCGGCCGCTCCAGGAAGAATCTCAAACTGAAGGTATGTAGCGAACTTAATTTTATAACGTAG
- Protein Sequence
- MQLVLDTVIVSNTSCISSFNSIKESPGATEKTRISSRATSQAGAVIKPTESGRKVTSVVHEAACVPGEENKKRSRKRCPNWTHDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSKKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRTLVALGTDFTLMTELFPGRSRKNLKLKELSKPLKHPRSFNEKVADWQSSYGVTDAKLCSAARRSRKRCPSWTDNVTVRFYRALAALGTDFTLMTELFPGRSRKNLKLKVCSDAAASAVRAGPTTRPCASTARSALGTDVTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFAGRSRKNLKLKRRSRKRCLSWTDDEIVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWIDDETVRFYRALAALGTDFTLMTELFPGHSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNFKLKRRSRKRCPSWTDDETVRFYRALAALGTDFTLMTELFPGRSRKNLKLKRRSRKRCRSWTDDETVRFYRALAALGTDFTLMTELFPGHSRKNLKLKRRSHKRCPSWTDDETVRFCRALAALGTDFTLMTELFPGRSRKNLKLKVCSELNFIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -