Carc022687.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- Mblk-1
- Assembly
- GCA_036785405.1
- Location
- CM072077.1:3167404-3207095[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-14 3.4e-11 43.5 0.0 1 38 661 699 661 705 0.93 2 2 3.8e-18 2.8e-15 56.6 0.0 1 43 868 911 868 913 0.95
Sequence Information
- Coding Sequence
- ATGAAATCACATCAGAAAAAGACATTTCCTAAAGTTATACTAACTCGTGACATCTCCCTCCTTCCAGGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGAAGAAAATGGAAACTATACCAAGACGGGTTAATACCAAAGCGAACCGAGGGCGAGCCGTCGAGCGAAGACGAGAGCATCGCTGTCTCAGACCCCCCGCCCGCGCTCAAGATCAAGACCATCGAGCAGATCAACGCGCCGGAGAAGACGGAGAGAGCAGAGAGACAGGAGACCCCGGAGAGCGAGGAGAAGTATAGTGCTGAGAGCATCGCTGCCTCAGACCCCCCGCCCGCGCTCAAGATCAAGACCATCGAGCAGATCAACGCGCCGGAGAAGACGGAGAGAGCAGAGAGACAGGAGACCCCGGAGAGCGAGGAGAAGGTAAGTCACTACATCCTACTTCTGATACAGTATAGTGCTGAGAGCATCGCTGCCTCAGACCCCCCGCCCGCGCTCAAGAAGACCATCGAGCAGATCAACGCGCCGGAGAAGACGAAGAGAACAGAGAGAGAGGAGACCCCGGAGAGCGAGGAGAAGGAGAAACCTCGGAGGGAGACGATCCTGGAGAGCCTCATCAAGCGGCCCGCCACGCAGCCCAAGATGGAGGTGGCGGACGAGCCTGCGGACTGGAAGCCCGCCGACCGCTGCTACTTCTGCGTGGATGGGGAGCGGCCTGAACAGCCTGAGCGGGACGGCAGGCCAGCCACCGGCGCCACCAGTCCAGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGTGCCAAGAGCCCCGCGGGCCCGCCGTTGCTGCACcacctgctgcagctgcagTTGCAGGGGCAGAACCCGCAGGCGATCGCGCAGGTACTGCACCCTCACACAAGCAGCCTCCAGCCAAGGAGTCCAGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGCGCCAAGAGCCCCGCGGGCCCGCCGCTGCTGCACcacctgctgcagctgcagTTGCAGGGGCAGAACCCGCAGGCGATCGCGCAGGTACTGCACCCTCACACAAGCAGCCTCCAGCCAAGGAGTCCAGCATCGGAGTCGGACAGCAGTTCGGTGTCGGGCGCCAAGAGCCCCGCGGGCCCGCCGCTGCTGCACcacctgctgcagctgcagTTGCAGGGGCAGAACCCGCAGGCGATCGCGCAGGTACTGCACCCTCACACAAGCAGCCTCCAGCCAAGGAGTCCAGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGCGCCAAGAGCCCCGCGGGCCCGCCGCTGCTGCACcacctgctgcagctgcagTTGCAGGGGCAGAACTCGCAGGCGATCGCGCAGGTACTGCACCCTCACACAAGCAGCCTCCAGCCAAGGAGTCCAGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGCGCCAAGAGCCCCGCGGGCCCGCCGCTGCTGCACcacctgctgcagctgcagTCGCAGGGGCAGAACCCGCAGGCGATCGCGCAGGTACTGCACCCTCACACAAGCAGCCTCCAGCCAAGGAGTCCAGCGTCGGAGTCGGACAGCAATTCGGTGTCGGGCGCCAAGAGCCCCGCGGGCCCGCCGCTGCTGCACcacctgctgcagctgcagTTGCAGGGGCAGAACCCGCAGGCGATCGCGCAGTTCCAGCAGATGCTTGCGGCGTTGGCGGCGCTGGGCACTGGGCTGGTACCGCCGCCGCTGTCGCAGGCCTGGATGATGCAGCGGATGGCGCAGCAGCGGCCGCCGCAGGACAGGCTATCAGAGAGCGACAAAGTCGCCGCGCCGAGCTCGTCGCCGACGGTCGCGGAGCAGCCCCTCGACCTGAGCGCCAAGTCCACCTCCAGCACCAGCGGCACTCCCCCGCCCGACGCCAAGAGCCTCGACAACAGCAGATTAAAAAGGGCAGTCCTCGAAGGGTCCAGTAACAGCGCGACGAGACGGGCCTACACTGAGGATGAACTCCAATCAGCTCTTCGGGAAATCCAGTCGGGACGCCTcggcacgcgccgcgccgccgtccTCTATGGCATCCCTCGGTCCACCCTACGGAACAAGGTCAACAAGTTTGGCCTCACCTCCGACACCGGCCAGGAGTCGGACCCGGACAGCGAGCCGGACAAACCGGAGTCGCCTCCCTCCGTCATCCTCAAGATACCGACCTTCCCTCCCCCCGACGACAAGAGCCCTTCCCCCGCCACCCCAGTCACGACCCCCGTAACCCCGATAACCCCAATTCTCCCCCAACCGACCCTCAACCCAGCATCCCAGTTCATGCCCCTCTCGGTCTTCGCGGACCCGCAGCCGCCGACCCAACAAATCTTCACATCCCTAAGCGATGTTATAGCGAAAAGCATCAGCCAAAAGTTCCAGCAGCCTCTAGATAGGCCCCAACCTCCCGACCTGCCTTTCCTCCGAGCGCCCGACCGGCACGTGTCCGTCATCAAAACCCCTCCAGACAACCAGAGGTATGCGATGCCGAGCAATTCGAAGTTGAACTCCAACAATAATGGCCAGCCGGCAACAGGAGGAAAGGGGACGAGACCGAAGCGAGGGAAGTACAGGAACTACGATAGAGACAGCCTCGTGGAAGCCGTGAAAGCGGTCCAGCGAGGAGAGATGTCGGTCCACCGCGCCGGATCGTACTACGGCGTTCCACATTCAACTCTAGAATATAAGGTCAAGGAGAGACATTTGATGAGGCCGCGGAAACGAGAGCCGAAGCCTCAGCCTCAGGATATCAAACCTCAGCCGCCGAAACCTCCTCCGAAACCTCCGACGAAGCCGTTCACTAACGGGTTGAACGGCCCTGAAGGTGGTTACCCCCCCGGTTATCCGTTCTGGCCGGGCGCCGGGTTCGCGCCGCCGCCGGCTCCGGATCTATACGCGTCGCATATGATGAGACGGCTGCGGGAGGAAGCGCCCCCGCCGGCGAACGGGTCGTTCCTGGAAGGGATCATCCGATCTAGTTTGGAGCGGCCCGGCGCGGCGCTGCTACAGAGATTGAGCGCGCCTCCCGCGTCTCCCCCGGGGGGGTCCATGCGGAGGCGAGCGTCTCCCGGAGAGGAGCCCCTGGCGCGGCGACCGCGGCTGGACTCGGATCACCAGCTAGCTGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGAGCGAAGGAGCTCCGGCCGCGTAACGGTACTCCGACCCCACCGCCTGCGTCGCCGGCCGAAAGCGCGGGCTGCGGGGAGCGCGCCTAG
- Protein Sequence
- MKSHQKKTFPKVILTRDISLLPGLERVAEELMGRRKWKLYQDGLIPKRTEGEPSSEDESIAVSDPPPALKIKTIEQINAPEKTERAERQETPESEEKYSAESIAASDPPPALKIKTIEQINAPEKTERAERQETPESEEKVSHYILLLIQYSAESIAASDPPPALKKTIEQINAPEKTKRTEREETPESEEKEKPRRETILESLIKRPATQPKMEVADEPADWKPADRCYFCVDGERPEQPERDGRPATGATSPASESDSSSVSGAKSPAGPPLLHHLLQLQLQGQNPQAIAQVLHPHTSSLQPRSPASESDSSSVSGAKSPAGPPLLHHLLQLQLQGQNPQAIAQVLHPHTSSLQPRSPASESDSSSVSGAKSPAGPPLLHHLLQLQLQGQNPQAIAQVLHPHTSSLQPRSPASESDSSSVSGAKSPAGPPLLHHLLQLQLQGQNSQAIAQVLHPHTSSLQPRSPASESDSSSVSGAKSPAGPPLLHHLLQLQSQGQNPQAIAQVLHPHTSSLQPRSPASESDSNSVSGAKSPAGPPLLHHLLQLQLQGQNPQAIAQFQQMLAALAALGTGLVPPPLSQAWMMQRMAQQRPPQDRLSESDKVAAPSSSPTVAEQPLDLSAKSTSSTSGTPPPDAKSLDNSRLKRAVLEGSSNSATRRAYTEDELQSALREIQSGRLGTRRAAVLYGIPRSTLRNKVNKFGLTSDTGQESDPDSEPDKPESPPSVILKIPTFPPPDDKSPSPATPVTTPVTPITPILPQPTLNPASQFMPLSVFADPQPPTQQIFTSLSDVIAKSISQKFQQPLDRPQPPDLPFLRAPDRHVSVIKTPPDNQRYAMPSNSKLNSNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPQDIKPQPPKPPPKPPTKPFTNGLNGPEGGYPPGYPFWPGAGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLSAPPASPPGGSMRRRASPGEEPLARRPRLDSDHQLAAEMREAVQRLRAKELRPRNGTPTPPPASPAESAGCGERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -