Carc015416.2
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- kn
- Assembly
- GCA_036785405.1
- Location
- CM072069.1:14319247-14352365[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-142 2.9e-138 462.6 0.0 182 387 32 256 11 260 0.97 2 2 1.5e-07 0.0017 17.6 8.6 420 560 265 411 258 437 0.65
Sequence Information
- Coding Sequence
- ATGGCCAGCAAGCCCGTTCCCCGTCGCCGGCGCAACCATAACAGTCACACCTGCCTCAATGCTGCCATCTGTCCGACCGCAGACAAACCACGCCAGTTTTTTCTCAAATTCTTCTTGAAATGCAATCAGAACTGTTTGAAGAATGCCGGCAACCCGAGAGATATGAGAAGGTTTCAAGTGGTGATATCAACGCAAGTGATGGTGGACGGGCCGCTGCTAGCCATATCCGACAACATGTTCGTACACAACAACAGCAAGCACGGCCGCCGGGCGAAACGGCTAGACCCGTCTGAAGGTACTGACGCCGCGCCCGAACCTAACCATTCGGGGCTTTACCCACCGTTGCCCGTGGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGCTCCACTGTAATAATAGTGGGGGACAACTTTTTCGATGGACTTCAAGTCGTATTCGGAACTATGTTGGTATGGAGCGAGCTAATAACATCGCACGCGATCAGAGTGCAGACACCTCCGAGGCACATCCCTGGTGTCGTGGAGGTCACGCTGTCGTACAAGAGCAAACAGTTCTGCAAGGGCGCACCCGGGAGATTTGTATATGTTTCAGCTCTGAACGAGCCCACCATAGACTACGGCTTCCAGCGGCTCCAGAAGCTCATACCCAGGCATCCGGGCGATCCCGAAAAACTGCCGAAGGAAATCATCCTAAAGCGAGCGGCAGACCTAGCAGAGGCGCTGTACTCGATGCCTAGGAACAACCAGCTAGGTCTGGGTGCGCCGCGCTCCCCGCCCGCATCTATGCCCTTCAACTCCTACACAGGGCAGCTGGCGGTCAGCGTGCAGGACACTGCGGCATCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGTGGGTCGGTATCGCCGCGGTATTGCTCTGCCGCGTCCACgccgcacgcgcccgccgcctACCCGCCGCAGCACTACCCCGCGCCGCCTACCTCGCTTTTCAATACCTCTTCACTGTCTCTAGGACCGTACCACCCGGCGAACATGAGCGGGCATTTATCGTCCGACCATCACCAGAATAACGCGTATAACGGGAAAGATAGCGTGCATTACAGTGAAAGAAACGGGGACGCTAAAAGCGAATGTCCGGCAAACACTCATATAAAATGCAACGGTATGAAAGGGTTCAGTAAAGAGGCCAAGAATAGAAGCGCGTTTGCCGTTGTCAGACAGAGCCCGCCGAGTAGTTTTCAACAACATCCCAATTGGCATCATCTCACCGTGCAGTTATCGTCTCCCTTCAGCGTAAACCCTTTCTCGCTACCAACTTGCAGTGCTCAGCAGTACGCACAGACAGCACCACTGGCTTCCAAGTAA
- Protein Sequence
- MASKPVPRRRRNHNSHTCLNAAICPTADKPRQFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPEPNHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAPAAYPPQHYPAPPTSLFNTSSLSLGPYHPANMSGHLSSDHHQNNAYNGKDSVHYSERNGDAKSECPANTHIKCNGMKGFSKEAKNRSAFAVVRQSPPSSFQQHPNWHHLTVQLSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00984815;
- 90% Identity
- iTF_00954197; iTF_00353866; iTF_00801589;
- 80% Identity
- -