Carc023143.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- -
- Assembly
- GCA_036785405.1
- Location
- CM072077.1:11345185-11346977[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.28 8.4e+02 1.3 0.0 52 86 100 133 91 134 0.81 2 4 0.0034 10 7.4 0.1 24 86 166 227 147 228 0.71 3 4 0.0047 14 7.0 0.1 50 83 283 315 261 319 0.81 4 4 0.0072 22 6.4 0.0 49 83 382 415 375 418 0.82
Sequence Information
- Coding Sequence
- atggAAATCAATAATCCCCAAAGTTATTGGTTTGTCGTGAGGGAAGAtcaaagcaatgttatatttaGCAGCAATAATTTTACTATTCAAGCACCTCCGAGACAAGAAACCAGATACATTGTTGATGCCTCTGTAGATAACCGGCAATATGTCCACAACATTGCACCTGATAATTTGCCAGAGCCTCAAGAAGATACTGGAAAGGAATCCAAAGACTATAACTTCTGGGACAAGAATAAAATAAGACTGTTGCTCACACTCTGTCTAGATAACAGATTCAAAAGTCCAAACAAAGACAAAATGCTCTGGAATGAGATATCAATCTTAGTAGGAACAACACCAGAAGAATGTGACAAAAAGTATAGAAACCTACGCAGAACATACATAAGACTATTGAAGAAGAATAGAGCaggaaaagaaataaaatggaTTCACTACAACTTGTGCGATGAAGTGTTCAAAGACTGCAAGTCCATGACCACAGCCTTGCTACCACCCTGGGAAGATTCAAAGGTTCAGAAACTGTTACGCCTGTACATTGAAAACATCAACAAATTCCGCAGCCCCAATCACTTACAGAAGGATGTATGGAAAGAAATTGCTTTACAGTTGAACACAACAGAGTACAACTGCTACCATAAGTTTAAGAACATGAAAAGAACTTATTTCAACTGGCTAGAGAGAAGTAAAGAATTTGGAAAGTCAAGAAAATGGCCATACCAGCActattttgaaagaatttaCTACAACTACCATCCAGACTTGGGGCCCTGGGATAGGAATAAAATAAGACAACTAATAAATGCATATTCTGAAATTGCGCACAAGTTCAAAAATCCAAAATATCGGAAAAAAGAACTGTGGAGGGACATAGCTAGAAAAGTTGGAGAATCGCCGAGCAGTTGTGACAGGAAATTTAGAAATCTAAAACAGACTTATTTAAGATTAAAACTGAGAGCTGATACAGGGAGGTCTGTGACAAAATGGAGATACTTCAAAGATTTCATGACAATATTTGAGAATGAACCATTCACTCTGGATGATGAAGGGCAGAATTTAGGTTACAGACCTATGGAGCACAATTATATTAAGTTACTGCTAACATTCTATTTGGAGAACAAGCAGAAATTTAACAATCCACTTGTCAAAAAGAGGCATCTATGGAAGCAAATCGGCCCCAAACTAGGTTTGACTCCAGAAGAATGCGACAAAAAATTTAGAAACATGAAACAAACCTACATTAGATTGGCTGAAAAAAAAAGGGATACAGGCAAAGATAATACCTGGCCATATTACCCTTATTTTGAACAAATATACAGCGATTCTGACATGTTTCAATCCAGAGACTGCAGTCACAAATGTACCATTGATAGCACAGcaataaatgaaataacaaatatgGTCAAAGATCATGAAAGCAAGGGTAAGGATAAGTTTGAAAAATTAGTCTCGGCCATTGAAGAATCTAATAGTATTCAGCGGGAACGAAATAGAATATTGTTAGCTCTATTGAATAGAACATGA
- Protein Sequence
- MEINNPQSYWFVVREDQSNVIFSSNNFTIQAPPRQETRYIVDASVDNRQYVHNIAPDNLPEPQEDTGKESKDYNFWDKNKIRLLLTLCLDNRFKSPNKDKMLWNEISILVGTTPEECDKKYRNLRRTYIRLLKKNRAGKEIKWIHYNLCDEVFKDCKSMTTALLPPWEDSKVQKLLRLYIENINKFRSPNHLQKDVWKEIALQLNTTEYNCYHKFKNMKRTYFNWLERSKEFGKSRKWPYQHYFERIYYNYHPDLGPWDRNKIRQLINAYSEIAHKFKNPKYRKKELWRDIARKVGESPSSCDRKFRNLKQTYLRLKLRADTGRSVTKWRYFKDFMTIFENEPFTLDDEGQNLGYRPMEHNYIKLLLTFYLENKQKFNNPLVKKRHLWKQIGPKLGLTPEECDKKFRNMKQTYIRLAEKKRDTGKDNTWPYYPYFEQIYSDSDMFQSRDCSHKCTIDSTAINEITNMVKDHESKGKDKFEKLVSAIEESNSIQRERNRILLALLNRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091480;
- 90% Identity
- -
- 80% Identity
- -