Carc019682.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- retn
- Assembly
- GCA_036785405.1
- Location
- CM072074.1:6261238-6264317[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-17 5.2e-14 53.3 0.1 29 89 4 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCGAAGTCGGTGCTAGATCTGTATGAGCTGTACAATCTGGTGATCGCTCGCGGCGGTCTGGTGGAAGTCATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGCCTGCGGCTGCCTTCCTCCATCACCTCGGCCGCCTTCACTCTACGCACACAATACATGAAGTACCTGTACGACTACGAGTGCGACAAGAAGAACCTGTCGACGCGGAGTGAGCTGGACGCGGCGATAGAGGGCAACAAGCGCGAGGGCCGCCGCGCCTCGGGGCAGTACGACGCGCAGGCTGCTCTAGCCATGTACCTGTACGACTACGAGTGTGACAAGAAGAACCTGTCGACGCGGAGTGAGCTGGACGCGGCGATAGAGGGCAACAAGCGCGAGGGCCGCCGCGCCTCGGGCCAGTACGACGCGCAGGCTGCTCTGGCCATGGTGAGTCTACAAAGTACCTGTACGACTACGAGTGCGACAAGAACCTGTCGACGCGGAGTGAGCTGGACGCGGCGATAG
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMYLYDYECDKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMVSLQSTCTTTSATRTCRRGVSWTRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -