Basic Information

Insect: Coelopa pilipes
Gene Symbol: ush
Assembly: GCA_947389925.1
Location: OX376696.1:71658427-71665764[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0076 2 9.8 0.0 1 20 406 425 406 427 0.90

2 9 0.00019 0.051 14.8 0.7 1 23 489 511 489 511 0.98

3 9 0.041 11 7.5 1.0 2 21 549 568 549 569 0.92

4 9 0.029 7.9 7.9 2.9 2 21 1042 1061 1041 1062 0.93

5 9 0.0055 1.5 10.2 0.0 3 21 1110 1128 1108 1129 0.91

6 9 0.0021 0.56 11.5 0.1 1 23 1203 1225 1203 1225 0.99

7 9 0.0085 2.3 9.6 1.3 1 23 1231 1253 1231 1253 0.99

8 9 0.00066 0.18 13.1 1.0 1 23 1317 1340 1317 1340 0.96

9 9 0.19 52 5.3 0.8 2 20 1503 1521 1502 1523 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0076	2	9.8	0.0	1	20	406	425	406	427	0.90
2	9	0.00019	0.051	14.8	0.7	1	23	489	511	489	511	0.98
3	9	0.041	11	7.5	1.0	2	21	549	568	549	569	0.92
4	9	0.029	7.9	7.9	2.9	2	21	1042	1061	1041	1062	0.93
5	9	0.0055	1.5	10.2	0.0	3	21	1110	1128	1108	1129	0.91
6	9	0.0021	0.56	11.5	0.1	1	23	1203	1225	1203	1225	0.99
7	9	0.0085	2.3	9.6	1.3	1	23	1231	1253	1231	1253	0.99
8	9	0.00066	0.18	13.1	1.0	1	23	1317	1340	1317	1340	0.96
9	9	0.19	52	5.3	0.8	2	20	1503	1521	1502	1523	0.92

Sequence Information

Coding Sequence: ATGCCGGTCGATCCCCGGCCACCGCAGTTCACGTCGCTCGAACACCACACCACCCCCCCCCCCCTCCTCTCGTCTAGGCCTCTTCGCCGCCTTCTCTCCCCAGGCCGCTTCCTCTGTGGGGTTGGCGGAACCGGCATCGGAACCGGCACCGGCACCGACACCGTCGCCGTCGCCGACATCGACACCGAGGCCGAGACCGAGGGCAAGACCGGGACCCCGTCGCGTCTGGCCAGACAGGCGGACGACGACGACGACGACGGCCAACTGGACCTGGACCTGGGCCGGAGTCGGAATTCCAAAGATTTAAATCCAAGCGATCTGTCCGACGACCAGGACCACCACCATCCCCACTCCCACCTCAACCAGGATCCACATTCGCGCCAGTCGCCGGCGGCGAACGCCAACGAGGACGAGACTGATGCCCCAATGACTGAGAGTCCCGCGGACGCGTCGCCCTCCCGGCCCGCCTTCCCGCCCGACCCCACGTCCCCCGCGACCGCAGCCGACCGCGGCCTGCCCAGCCCGAGCGCCCACGGCCGGGTCTCCGCCGGCCCCGCCTCTGCCTTCTCGACCTCCACCAGCTCCTCCTCCGCCTTCTCCGCCTCCTCCTCGTCGTCGTCCTCGTCCGCCTCGTCACAGCCGGAGGCGGCGCCCACGGAAGCCACGGCCGCTACCGCCGACGAGGTCCGGACGAAGGAGGAACTGATCgaggacgacgacgccgagcacgacgcccacgtcaacgccgtcgccgaggaggacgacgtcgccaatgaccaggccaacgacctgtcgatgccGCGCCCGGCGTCCCCCGAAGCCGGCAGCGGCGCCTTCGACGACGACCACCTGCGGCAGCTGAGGCCGCTGGAGGAGGGGTCCGAGGGCGACGAGCTCGGCGCCCGCAGCGTGGCCTCGTCGCCGTCGGGGATTCTGCCGAAGCTGCGCCTGAACGCGCTGCTCGCCTCCGACCCGGCCCTCAAACCGGACGCCAAGGACCTCAAGGCCATGCACGAGGAGACCCAGACCCAGACCCAGGCCCACGTCCAGACCCCGGCGCTGACGCAGAAGAAGCGGCCGCACGTCGGGCCGCCGCCGCCGCTGACCAAGTCGGAGGAGCTGCGGGCGAGTCTCGTGGCCGACGCCGCCCTCCAGGCCGCGACGCCGACCCCCGCCGCCGCCGCCCCCGTCGAGATGCCGCCGCGCATGAAGGTCTTCATGTGCCTGCCGTGCGGCATCGGCTTCAGCTCGCCGTCGACGCTGGAGGCCCACCAGGCCTACTACTGCTCccatcgCAGCAAGGACCTCGAGGACGACGCGTCCGGGCTGTCGCTGTCCGGCGCCCTCGCCGAGAAGACCTCGGGCTCGCCCACGGGGGTCGCCGCCGCCTCGGCCGCCGGCGCGTCGGGGGTGGCGGGCGCCAGCGGCGAGCCCTCGGCGAAGGCCCTCAAGACGGGGAAGCAGTACGCGTGCTCCCAGTGCTCGTACAGCGCCGACAAGAAGGTCTCGCTCAACCGGCACATGCGCATGCACCAGACCTCGCCGGCGCCCAGCGCGAGCGCCTCCAACGGGGCTGGTGTCGGGGCCGGAGCGGGCCCGGGACCGGGAGCAGTCGATGAAACCACTAGTCAACAGATCGATCGCTACTGCAGCGAGTGTGATATCAGGTTCAACAACGTCAAGACCTACCGGGCCCACAAGCAGCACTACTGCAGCTCCCGCAGGACCGACGGCCAACTGACCCCGAAGCTGGAGGTCTCGACCGCGGCGGCCCCGAAGGCCGCGGCGGCGTCGGCCCCGGGCAGCTCGGGCGGCTCGATCAGCCCCCAGACGACGCGCACGAAGACGCCGAACCCGGCGATGGTGGCGGCGGCAGCAGCGGCGGCGGCGGCCGCGGCCTCGCTGCAGCCCCCGCCGCAGCCGTTCCTGGCCCTACCCACGAACCCCATCCTGATCATTCCGTACGCGCTGGTCCGCGCCGCCAGCCTCATCCCGGGACCCTTGACGACGGCCTCCTCGGGCATCGTGAACCCGGAGAACACCTGCTTCACCCTGGAGAACGGCGCCCTGAAGCCGCTGGCCACCGCCCTGGGCATGGGCGGCGGGGCCGCGGCCAGTTCGCCGGGGGCGGGGGTCGTGGCGAACACCAACCATCACAACAACAACAACAACAACAATAACAACAGCGTGGCCAACCCCGGCAACGGCCACCAAATCCCGGTCGTGGACTCCCCGAGGCAGCCGCACAAGCACCACCAGCACCACCAGCAACACCAACAGCAGCAACCAAGCCCTGAGTCTGGCCTGCTGGCCGAGAAGGCGGCCCGGGGCAAGGCCTCTGAGGACGTCCCGCCGCCCACCAAGCGCAGCAGCGAGGGCGGGGCTCGGGAGTCCTCGGCCCCGCTGGACCTCTCGCTGGCCCGCCGCTCGCCCCTCACGGCCGCCCTGCAGCGCCAGCGCCTTCGCTCGGCCTCCGTCTTCCTGGCCGACCCGACCGAGCCGCATCGCCTCGACATGGAGACCCTGCTGGAGGCCGGCAAGGAGAACCTCTCGCTGCGCGGCGACCACAGCGGCGGCGGCGGCAGCGGCAGTGGCAGCGTCACGCCCGAGCAGATCGTCTGCGCCCCCTCGCTGCCCAACAGCCCCTCGATGAGCCCCTCGCCCAAGCGGCGCGCCCTCAGCCCGCGCAGCTGCGGCGCCGGCAGCACGTCCTCGATGTCGCCGCCGGCCAGCGTCGCCTCGACCGCCTCGGCCGCCCTCGCCGCAGCCGCCGCCACCGGCAACATCCTCGACCACCTGCCGCTGCGCTCGATGCTGCCGGCCGACATCGCCCTGAAGCTCTCCGAGTCGAACATCATGAACCCGCTGCTGGCCAAGCAGAACCTCGAGCTGGCCCTCAAGCTCTCGGCAGCCGCCGCGGCCGCCGTCAGCTCCTCCACGGCTGGTGGCGGTGGCGGGGGAGGCGCCGCGAACCCCGCCGACCTGGCCGCGGCCGCCGTGGCCGCAGCAGCCGCGGGCAAGTCGTCGCTGCTCGGGCTGCCGGTGCTGCCGACGCCTGCTGCGGCGGCCGCGACGGCGGGCCCCGGCGGCCAGCCGCAGATCTACGTGAAGCAGGGCGTGTCCAAGTGCAAGGAGTGCAACATCGTGTTCTGCAAGTACGAGAACTACCTGGCCCACAAGCAGCACTACTGCTCGGCCCGCAACCAGGACCTGGGCGGCGAGGGGCCCGTCGGCGGCGTCGGCGATTCGAAGCCGAGCCACACGCCGCCGATGGCCGCGGGCCCCACGCAGGCCGACACCACGCCCGTGGCCTACCAGCAGCTGATCTGCGCCGCCTGCGGCATCAAGTACACGTCGCTGGACAATCTGCGCGCCCACCAGAACTACTACTGCCCCAAGGGCGGCGGCGCGGCGGCGGCAGCGGCGGCCGCAGCAGCAGCAGCCGCCGCAGCGGCCGCCGCCGACGCGGGCCAGCTGGCGCTGCCCGCGGCCAAGGAGAAGTGCGGCAAGTGCAAGACCGTGCACGAGGTGGGCCTGGCGTGTCCGCCGCCGCCCGTGGCGCTGCAGCAGCACCAGCAGCAGTCGGCCGGGTCGAACCACGGCGCCTACAAGTGCCCCGTCTGCGAGGTGGTCAGCGCGACGGCCAGCGAGAGCCGCAAGCACATGGAGACCCACGGCAGCGTGAAGGCCTTCCGCTGCTCCATCTGCCGCTACAAGGGCAACACCCTGCGTGGAATGCGGACCCACATCCGGATGCACTTCGACAAGAAGACCACGGACATCAACGAGGAGCACTACATGTCGTGCATCCTGGAGGACGAGGGCCTGGAGATCCCCAGCGCGGCCTCGCTGAGTCAGGAGCACCTCGTCcagcagttggccgccgtccagcagcagcagcagcaacagcagcagcagcagcacctgcagcaactgcagcagcaggtctacaactgcgacttctgcaactacTCCTCGTCGTACAAGGGCAACGTGCTGCGGCACATGAAACTGGTGCACCCACAGGCGGTCGTCAACTCGCCCTCGATCTCGCCCGAGGCCGGCGACTCGGAGGCCGACGCAGCGTCGCGCACGAGCAGCCTCAACGGCGCCGGCGACAACGGCAGCAGCCACGGGTTCAGCATCAAGACCGAGCCGCTGGACATCGGCGCCATCTCGAATCCGCTTCCGCTGGCGCCGCCGCCCACGCGCTCCACCTCGTCGCTGGGCAACCTGCACGACAACAACAACTCGCCCGTGCCACCCTCGCTGACGCCGACGAACTTCAACCACATCAACGCCAACAGCAACAGCAACTCGAACGACCTGATCGCCCACATCAAGTCGGAGCCGTTGGACACGATCACGATCGAGACGACCCAGCTGACGGCCTCCCACCCGCCACCGCCGCCGCCCCCGCTGGCCCACTCGCCCTCGGTGATCGGGCCGCCGCCGCCGTTGAACGCCACGCCCGACGAGAACATCGGCGGGGTCGTCAACCAGAAGTACTGCCAGACCTGCGACATCTCGTTTAACTACATGAAGACCTTCCTGGCCCACAAGCAGTTCTACTGCAAGAACAAGGTCCGCCGGCCCGAGCTGGCCGCCTACCGCGACAGCCCCAGCCCGAACGCCCCGGGCATGCACTCGCCGACGGCCGCCCTGCTGCTGCAGAAGAACAAGGAGAACCTGCAGCAGGAGGCGGCCATTTGA
Protein Sequence: MPVDPRPPQFTSLEHHTTPPPLLSSRPLRRLLSPGRFLCGVGGTGIGTGTGTDTVAVADIDTEAETEGKTGTPSRLARQADDDDDDGQLDLDLGRSRNSKDLNPSDLSDDQDHHHPHSHLNQDPHSRQSPAANANEDETDAPMTESPADASPSRPAFPPDPTSPATAADRGLPSPSAHGRVSAGPASAFSTSTSSSSAFSASSSSSSSSASSQPEAAPTEATAATADEVRTKEELIEDDDAEHDAHVNAVAEEDDVANDQANDLSMPRPASPEAGSGAFDDDHLRQLRPLEEGSEGDELGARSVASSPSGILPKLRLNALLASDPALKPDAKDLKAMHEETQTQTQAHVQTPALTQKKRPHVGPPPPLTKSEELRASLVADAALQAATPTPAAAAPVEMPPRMKVFMCLPCGIGFSSPSTLEAHQAYYCSHRSKDLEDDASGLSLSGALAEKTSGSPTGVAAASAAGASGVAGASGEPSAKALKTGKQYACSQCSYSADKKVSLNRHMRMHQTSPAPSASASNGAGVGAGAGPGPGAVDETTSQQIDRYCSECDIRFNNVKTYRAHKQHYCSSRRTDGQLTPKLEVSTAAAPKAAAASAPGSSGGSISPQTTRTKTPNPAMVAAAAAAAAAAASLQPPPQPFLALPTNPILIIPYALVRAASLIPGPLTTASSGIVNPENTCFTLENGALKPLATALGMGGGAAASSPGAGVVANTNHHNNNNNNNNNSVANPGNGHQIPVVDSPRQPHKHHQHHQQHQQQQPSPESGLLAEKAARGKASEDVPPPTKRSSEGGARESSAPLDLSLARRSPLTAALQRQRLRSASVFLADPTEPHRLDMETLLEAGKENLSLRGDHSGGGGSGSGSVTPEQIVCAPSLPNSPSMSPSPKRRALSPRSCGAGSTSSMSPPASVASTASAALAAAAATGNILDHLPLRSMLPADIALKLSESNIMNPLLAKQNLELALKLSAAAAAAVSSSTAGGGGGGGAANPADLAAAAVAAAAAGKSSLLGLPVLPTPAAAAATAGPGGQPQIYVKQGVSKCKECNIVFCKYENYLAHKQHYCSARNQDLGGEGPVGGVGDSKPSHTPPMAAGPTQADTTPVAYQQLICAACGIKYTSLDNLRAHQNYYCPKGGGAAAAAAAAAAAAAAAAAADAGQLALPAAKEKCGKCKTVHEVGLACPPPPVALQQHQQQSAGSNHGAYKCPVCEVVSATASESRKHMETHGSVKAFRCSICRYKGNTLRGMRTHIRMHFDKKTTDINEEHYMSCILEDEGLEIPSAASLSQEHLVQQLAAVQQQQQQQQQQQHLQQLQQQVYNCDFCNYSSSYKGNVLRHMKLVHPQAVVNSPSISPEAGDSEADAASRTSSLNGAGDNGSSHGFSIKTEPLDIGAISNPLPLAPPPTRSTSSLGNLHDNNNSPVPPSLTPTNFNHINANSNSNSNDLIAHIKSEPLDTITIETTQLTASHPPPPPPPLAHSPSVIGPPPPLNATPDENIGGVVNQKYCQTCDISFNYMKTFLAHKQFYCKNKVRRPELAAYRDSPSPNAPGMHSPTAALLLQKNKENLQQEAAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -