Basic Information

Insect: Coelopa pilipes
Gene Symbol: L
Assembly: GCA_947389925.1
Location: OX376698.1:7778814-7788422[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.1e-06 0.00084 20.4 1.7 1 23 235 257 235 257 0.98

2 18 0.26 70 4.9 5.8 1 23 263 285 263 285 0.98

3 18 1.4e-07 3.7e-05 24.7 3.1 1 23 291 313 291 313 0.99

4 18 6.3e-06 0.0017 19.5 0.3 1 23 319 341 319 341 0.98

5 18 2.1 5.5e+02 2.1 0.1 3 23 429 451 427 451 0.82

6 18 0.0047 1.3 10.4 0.2 3 23 476 497 474 497 0.96

7 18 0.017 4.4 8.7 0.7 1 23 638 660 638 660 0.97

8 18 2.1 5.6e+02 2.1 0.3 2 23 690 712 689 712 0.66

9 18 0.00066 0.18 13.1 0.0 5 23 730 749 720 749 0.86

10 18 0.63 1.7e+02 3.7 0.0 1 20 754 773 754 774 0.95

11 18 7.2 1.9e+03 0.4 0.2 9 23 793 808 785 808 0.79

12 18 0.0017 0.46 11.8 2.7 1 23 868 890 868 891 0.96

13 18 0.0006 0.16 13.2 4.6 2 23 1133 1155 1132 1155 0.96

14 18 0.024 6.5 8.2 0.1 1 23 1161 1183 1161 1183 0.92

15 18 3.8 1e+03 1.3 0.2 2 23 1191 1212 1191 1212 0.90

16 18 0.27 72 4.9 0.5 2 23 1349 1370 1349 1370 0.94

17 18 0.045 12 7.3 0.0 1 23 1380 1402 1380 1402 0.96

18 18 0.061 16 6.9 1.7 1 23 1409 1431 1409 1431 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.1e-06	0.00084	20.4	1.7	1	23	235	257	235	257	0.98
2	18	0.26	70	4.9	5.8	1	23	263	285	263	285	0.98
3	18	1.4e-07	3.7e-05	24.7	3.1	1	23	291	313	291	313	0.99
4	18	6.3e-06	0.0017	19.5	0.3	1	23	319	341	319	341	0.98
5	18	2.1	5.5e+02	2.1	0.1	3	23	429	451	427	451	0.82
6	18	0.0047	1.3	10.4	0.2	3	23	476	497	474	497	0.96
7	18	0.017	4.4	8.7	0.7	1	23	638	660	638	660	0.97
8	18	2.1	5.6e+02	2.1	0.3	2	23	690	712	689	712	0.66
9	18	0.00066	0.18	13.1	0.0	5	23	730	749	720	749	0.86
10	18	0.63	1.7e+02	3.7	0.0	1	20	754	773	754	774	0.95
11	18	7.2	1.9e+03	0.4	0.2	9	23	793	808	785	808	0.79
12	18	0.0017	0.46	11.8	2.7	1	23	868	890	868	891	0.96
13	18	0.0006	0.16	13.2	4.6	2	23	1133	1155	1132	1155	0.96
14	18	0.024	6.5	8.2	0.1	1	23	1161	1183	1161	1183	0.92
15	18	3.8	1e+03	1.3	0.2	2	23	1191	1212	1191	1212	0.90
16	18	0.27	72	4.9	0.5	2	23	1349	1370	1349	1370	0.94
17	18	0.045	12	7.3	0.0	1	23	1380	1402	1380	1402	0.96
18	18	0.061	16	6.9	1.7	1	23	1409	1431	1409	1431	0.95

Sequence Information

Coding Sequence: ATGATGGCTCTCAAGATGCTCTACCATGGACCCAGCTCGCGACTGGAGAACCTGATCGAGAAGATCCAGGCCACCAAGGAGGTGGTCAGCGCGGACATGTACTCGACGCACACGTCCTCGAGCTACTCGCCCTCGGTCTCGGACGGCACCATCACGCCCAACTCGCTGCATTTGCATCACCAGCAGCACCACCAGCCGGCGCATCTGTCGCTCCTGCCGCCCCACCACCAGCACCAGCACCAGCACCCGCTCGACGCCTCCAGCGACGCCGCCGGCCACCGGGCGCGGTCCAACGGGCAGCTGCCGGGAGACGGCGAGGGCGACGAGGCCGACGACGACCACGACGAGGACGCCGTGGACGCCGGCGACAACGGCTTCAAAGGCCTGGAGGACGACGGGGCTCGAAAGAAGTCCCTGTTGGCCACGGCTCGCCTGAACGGCGAGGAGCCGCCGCCCCACAGTCACGGCATCGGCCTCAACCACGGCCTCGGGCTCGGCCACGGCCACGGCGGGCACCGGCACCACCGACTGGGCGGAGGCCGCTCGGGCCGGCTGGGCCTGATGGCTGGAGTGATGGGCGACGGCCTGAGGCTGCCCTCGAAGCTGCGCAAGCTCGATCGGGAGGCGGCGGCGGCGGCGGCATCGTCGAAGTTCGATAAGTTGACAGGCGAGGGCATTAAGAGCGCCTCCGCCGACGGATCCTATCAGTGTCAGTTCTGTGATAAGTCCTTTCCGCGCCTCGGCTACTTGAAGAAGCACGAGCAGAGCCACGCGGAGCACCTGCCCTTCAAGTGCGACTACTGCGCCCGGCTCTTCAAGCACAAGCGCTCGCGGGACCGGCACACGAAGCTCCACACCGGCGACCGGCGCTACCGCTGCCCCCACTGCGAGGCCGCCTTCTCCAGGAGCGACCACCTGAAGATCCACATGAAGACGCACGACAACCAGAAGCCCTTCCAGTGCACGATCTGCAACCGGGGCTACAACACGGCCGCCGCCCTCACCTCGCACATGCAGAACCACAAGAAGCAGGCCGCGATCCTGGCGGCCGGCGGCAACCCCCAGGCGCTCCTCAACTACAGCCCCCGCTCGACGGGCTCCACCTCGGCCTCGACCTCGAGCAACGGCAGCCTGCACAAGCGCCGCTACGCGATGACCCTGTCGGGCAACCAAAACAGCAACAGTCACAACAACAACACCAGTGGCAGCCACCACAACACGACCGAGGGCGGCCCGAGCTCGGACTTCCCGAAGCGACTGCGCAGCTCGACGTCGTTCCTCGCCTGCTCCTACTGCACCAAGAGCGACTTCGGCTCGCTGGAGCAGCTGAACGCGCACGTCCAGGCGATGCACGAGAAGGAGCTGCTGCCGAACCTCGTGCTCGCCAACAGCAACCTGGAGCAGTTGCAGACCTTCCAGCTGGCCTGCGAGTACTGCACGATGAAGTTCCCGAACATCCCCGCGATGTTCCAGCACATGCGGAGCACCCACGTCGACCGGCTGACCAGCCCGAACTCCTACTTCGAGCACTTCAACCGGCTGGCGGCCTCGGGCACCTTCAGCCCGCGGCTGCCCACGACCAAGGCCAGGAACCCACACCCGTCGACCAACAGCAGCAGCAGCAACAACAACAATGAGGGCGGCTCGAACCACAGCCTCGACCACATCAAGGTGGAGCGCGAGGCGAGTCCGAAGACGACGTCGGCGACGTCGACGACGACGACGGAGGGCGTGGCAGCCGCCGCCAAGCAGGAGGAGCCGACGGACCTCAGCCAGAACAAGCGGCGCTCGCAGAGCCCGGAGCAGCCGCAGCAGGCGTCGCAGTCGACATCGCTAGTGCGGTCGACGCCGCCGCAGCCGCAGTCGAGTCCGCCACGCCAGCGCAGCTCGCCGGCCGAGAAGCCCGACGTGTTCTTCTGCAACCAGTGCAACGCGGGCCTGCCGGACTTCGAGAGCTTCCGCAACCACCTGAAGACCCACATCGCCCAGGGCCTGAGCCACCTGAGCCACGGCCAGAGCCATCACCACGGCCACGGCCACGGCCAGGGCCAGGGCCACCACCAGCAGGTCTGCCACCACTGCGGGCTGGCGGTGCGCGGCGACGCCGGCGAGTACGAGCGCCACGTGATCTCGCACTTCCTGATCGCCTCCTCCGAGTACGCCTGCGGCGGGGGCGGCGGCCCGGGAGGCTGCGGCAAGACGTACGCGAAGCCGGAGGAGCTGCAGAAGCACCAGCTGGAGCAGCACGTGGCGAGCGTGTTCAAGTGCTCGCTGTGCGCCGACGTCTTCGAGACGAAGGTCCAGGTCCAGGTCCATCTCGCCTGCGCGCACGCGCCGCCCGAGACGCGGCTCCTGCGCTGCTCGGCCTGCATGGACGTCTTCCGCGCGGAGCAGGAGTTCAACGCGCACGTCCGGACGCGCCACCAGGCCACGGCCAACGGCAGCGGCAACGCCGTCCCTAACGGCATCGGCGTCGGCGTCGGCCTGGGTGGACTCGGGGGCCTCGGCGTGGGGCCGCAGTCGCTCCAGTGCATGTTCTGTCGCACGGTCTGCTCCTCGGAGCTCGAGATGCACTTCCACCTGGCCGCCCACGCCCGCCAGTTCCGCTGCCCCTCCTGCCCGGAGACCTTCCACGTCGAGTTCCTGCTCGACCGCCACATGCAGAGCCACCACGGGGGCAACGAGCGCCGGTCGGCGTCCTCGCTGGCGCCGCCTCCTGCGCCCACTGCCCTCGAGGACCCGCCGCCGGCCTCGCTCGCCAGCAACGCCCAGCTGAGCCCGATGAACTCGCTCTACGTCAACGCCCTGTTCGGGAAGTCGGCGTCGTCGCAGCAGCAGCAGCAGCCGCAGAACAACAACAGCAGCATCCTCGACTACAACGTGGCCTTCGCCGCCGCCCACCTCAACAAGGGCCTCTTCGGAGCCACGGCGGGGGCCGGATCGGGGTCGGCGGCTGGCACTGGGACTGCGACTGGGAAGTTCTACAGCCCGCTGCAGGTGGACACGGCCGGGGCGCTGAAGCACCCGGCCCTGATGTACGGGCTCGGGCAGCGCTTCTTCGACGCGAACGCCCGCACCCTGATGGACATGTACcagcagcaccagcagcagcagcaacacctccagcagcagcagcaggagaagacgccgtacttcatcagcCCGAAGCAGGCGGCGGAGGCGACGCAGGCGATCGGCGACCGAGGCGCCGGCCCTCGCAAGACCCCGACCGAGTCCGCCGCCGTTTCCGCGTCCGGTTCAGCGGCGCCAACCGGGGCCGGGACGACGGCGGCCGGCTTCAGTTGCGGGCTGTGCGAGCGCAACGACTTCCGGACGGAGGCCGAGGTCCACTCGCACCGGAAGATCGTCCACAACCTGAAGACCGGGGTGAGTCTGCGCTGCGCCTACTGCTCGGGCAACTTCAAGTCGCGCAGCGAGCTCGAGCACCACATGAAGACCTGCCACAACTCGACCGGGAAGCACAAGTGCCTCATCTGCGACGAGGTCTTCCCGTCGCCGGCGATTCTGGCCGAGCACAAGCTCCAGCACTCGAAGGTCGGGCAGTCGGGCAAGTGCTCGCACTGTGCGAAGCCGCTGCAGGACGTGGCCGCCTTCAAGGGGCATCTGGCGGAGCACAACAACAACAGCAGCAGCCACCACAACAACAACGGCGTCGCAGCCGACGGCCAGACGCAGATGCCGGTCCAGTGCATCTGCTGCCGCCAGTCGCTGCACTCGGACTTCGAGATCGGCCTGCACGCCAAGTTCCACACGAAGTCCTCGGGCCAGCCGGAGGCCGTCTGCGCCCTGTGCCTGGAGCCGATCGCGCACGCCACCGGCGCCGAGGCCAAGGTCTGCGAGCGCTGCTGCCGCAAGCACAACCTCGGCGCCAAGTTCCCCAAGCAGCGCGACGCCCTGCCCCCCAACAACAACAACAACAACAACAACACATCCACAACCTCGAGCTCAACCTCCACCTCCACCTCCTCCTCTTCCACCGCTTCCGCCTCCAGCGCCTCGAGCGGCGCCCACTTCATCGAGAACCGGTGCAACCTGTGCAAGATGATCCTGCCGCATCCGCAGAAGCTCCAGGAGCACCTCGTCGAGCACACGTTCGCCGGGTGCGAGGAGCGCGGCTTCAACTGCTACATCTGCTCGGCGGTCTTCACCGCGCCCGCCGGCCTTCTCGGGCACATGGCCGAGCACGGGCCGAACGCCCGGCCCTACGACTGCAACCTCTGCACCGAGAAGTTCTTCTTTCGGGCCGAGCTCGACCACCACCTGGTCAACCACGAGCTGCGCGACGCCGCCCAGGCGGCCACCAGAGCAGCGCCGACAACAGCGTCGTCCTCGTCCTCATCCACGTCCACGTCGTCGTCGGCGAATCCGTCGGCGACGCCCTCGGGCTCGCAGAGGAGGGAGAAGGAGCTGGGGGCGAGGGAGCGCAAGGAGGCGGCTCCCGAGAAGCCCCAGGCGTCGGCAGCGGGCGAGCAGAGGGCGGAGAGGGAGGCGGCGCCATCGGCATCGGCTTCGACTTCAGCATCGACCTCGGCATCGTCGTCAGGAGCGTCGGCGGCGTCTACGGCGTCTGCGGCGTCGACGGCGGCTCTGCCGGCGTTGGCCAGCGTCAAGCAGGAGGTGCTCGAGGAGGGCGACCGGGACGCGGCGGAGGGCGCGGACGGGGGCCCCGGGGAGGAGGACGACGAGTACATCGAGGTCGAGCAGGTGCCGGAGGCCGGCCAGCGGGACGGCAACAGCGAGGGGTGCGAGAAGCGGGCGCCGTCGGAGGCCGACTGA
Protein Sequence: MMALKMLYHGPSSRLENLIEKIQATKEVVSADMYSTHTSSSYSPSVSDGTITPNSLHLHHQQHHQPAHLSLLPPHHQHQHQHPLDASSDAAGHRARSNGQLPGDGEGDEADDDHDEDAVDAGDNGFKGLEDDGARKKSLLATARLNGEEPPPHSHGIGLNHGLGLGHGHGGHRHHRLGGGRSGRLGLMAGVMGDGLRLPSKLRKLDREAAAAAASSKFDKLTGEGIKSASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALLNYSPRSTGSTSASTSSNGSLHKRRYAMTLSGNQNSNSHNNNTSGSHHNTTEGGPSSDFPKRLRSSTSFLACSYCTKSDFGSLEQLNAHVQAMHEKELLPNLVLANSNLEQLQTFQLACEYCTMKFPNIPAMFQHMRSTHVDRLTSPNSYFEHFNRLAASGTFSPRLPTTKARNPHPSTNSSSSNNNNEGGSNHSLDHIKVEREASPKTTSATSTTTTEGVAAAAKQEEPTDLSQNKRRSQSPEQPQQASQSTSLVRSTPPQPQSSPPRQRSSPAEKPDVFFCNQCNAGLPDFESFRNHLKTHIAQGLSHLSHGQSHHHGHGHGQGQGHHQQVCHHCGLAVRGDAGEYERHVISHFLIASSEYACGGGGGPGGCGKTYAKPEELQKHQLEQHVASVFKCSLCADVFETKVQVQVHLACAHAPPETRLLRCSACMDVFRAEQEFNAHVRTRHQATANGSGNAVPNGIGVGVGLGGLGGLGVGPQSLQCMFCRTVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSHHGGNERRSASSLAPPPAPTALEDPPPASLASNAQLSPMNSLYVNALFGKSASSQQQQQPQNNNSSILDYNVAFAAAHLNKGLFGATAGAGSGSAAGTGTATGKFYSPLQVDTAGALKHPALMYGLGQRFFDANARTLMDMYQQHQQQQQHLQQQQQEKTPYFISPKQAAEATQAIGDRGAGPRKTPTESAAVSASGSAAPTGAGTTAAGFSCGLCERNDFRTEAEVHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCAKPLQDVAAFKGHLAEHNNNSSSHHNNNGVAADGQTQMPVQCICCRQSLHSDFEIGLHAKFHTKSSGQPEAVCALCLEPIAHATGAEAKVCERCCRKHNLGAKFPKQRDALPPNNNNNNNNTSTTSSSTSTSTSSSSTASASSASSGAHFIENRCNLCKMILPHPQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPAGLLGHMAEHGPNARPYDCNLCTEKFFFRAELDHHLVNHELRDAAQAATRAAPTTASSSSSSTSTSSSANPSATPSGSQRREKELGARERKEAAPEKPQASAAGEQRAEREAAPSASASTSASTSASSSGASAASTASAASTAALPALASVKQEVLEEGDRDAAEGADGGPGEEDDEYIEVEQVPEAGQRDGNSEGCEKRAPSEAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -