Cpil020255.1
Basic Information
- Insect
- Coelopa pilipes
- Gene Symbol
- ZFY
- Assembly
- GCA_947389925.1
- Location
- OX376699.1:7874325-7876197[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.4e-05 0.0037 18.4 2.7 1 23 146 168 146 168 0.98 2 11 3.5e-06 0.00094 20.3 1.3 1 23 174 197 174 197 0.97 3 11 2.2e-06 0.0006 20.9 0.5 1 23 203 225 203 225 0.99 4 11 2.8e-06 0.00076 20.6 0.9 1 23 231 253 231 253 0.98 5 11 1.5e-06 0.00039 21.5 0.4 2 23 261 282 260 282 0.97 6 11 0.092 25 6.4 1.4 3 23 290 311 288 311 0.92 7 11 0.0036 0.98 10.8 0.1 1 23 317 338 317 338 0.97 8 11 1.2e-05 0.0032 18.6 1.4 1 23 344 366 344 366 0.98 9 11 4e-06 0.0011 20.1 1.8 1 23 372 394 372 394 0.99 10 11 0.0028 0.76 11.1 1.3 1 23 400 425 400 425 0.94 11 11 8e-05 0.021 16.0 0.3 1 21 431 451 431 452 0.95
Sequence Information
- Coding Sequence
- ATGGTGCGGAGTCGTCGCTCGATTTCGAAAGAGGACGCCAGCTCGGTGCTGGCCGACAGCGGGATCTCGCTGTCGTCGCCCGGCGCCCCGCTGCTGCCcgaggaggaggaggagatgatcgagaagctctgcgtcaccgacgacgaggacaacgcggacaacgtcaaggacgatcgcgacgatgacgacagcaaggctgggaacacggccgacgacagcaacgatgaagacgatgacgacgacgaggaggaggaggatgacgatgatgatgaggaggaggaggaggacgacaagaaggcctcgctctcggactacagcgcggacgagcccccgtcgccgccagcgccgaagcgtcgcaggcgccagacggcgtcggtggcGGCCggcaaaggcgcctcctcagcttcgccatcgccggcgaaggcgcgcaagacgtacgagtgccacgtgtgccacaagcagttcggcggcaacaccgacctgcgccggcacctcctgatccacaccgacgagcggccgtacgcgtgcacgcagtgcgacaagcgctaccggcagctggtgaacctcaagaaccacacgaagagcgtccacgacgcccagcgccagttccgctgcgagctctgccccaagtcgttcgcgctgaaggagcgcctgcgcctccacatgcgcgtccactcgggcgagaagccctactcttgtccccactgcgagaagaagttcgcccgcggCGGCCAGCTGCAGCAGCATCTGGTGACCCACGGCGCGGGCGTCAAGAGCATCACGTGCGACAAGTGCTCGGCCTCGTTCTCGAGCGCGGCGAACCTGCGGCTGCACATGAAGCGGCACGAGGAgggcccgaaccacctgtgccacatctgcaacgagatgttcctcaacgagatggtgctgcgggcgcacgtcaacagccagcacttcaagctgaagcagttcgagtgcgacgtctgcaagaagtcgatcgaggacgacgacctggccgcgcacatgaagacgcacagccatctgaagacgcacgtgtgcgaggtctgcaactcgctcttcacccagaagtcccagtacaacgttcacatgcgtatgcacaccggcgagcggccctaccagtgcCGGAtctgctggcagtcgttcgcgcactcgagcgtgttgaagctgcacatccgcaagcacaccggcgagaagcccttccggtgtctgctgtgcaaggacgaggtcgccttctcgcagttggctcacctcaagacgcacatgaagaagatccacaagcaggagaacccctacatgtgcgagggctgccaccagttcttcaaggtcaagatcgacctgcaggcccacatggagcagagcgCGAGCTGCGACTCCAAGTCGAACGAGCGCCTGCAGAGCGACTCCACCGAGATGGCCGCGCTGTCGCACCTGCGCTTCCTCATCGCGGTGCTGCTGAAGAAGATCTCGTCGGAGCAGAAGCTGCATCAGCTGGGCTACGAGAAGCGGCTGATCGACAACGTCGTCGTCGCCTCGCTGAAGTTGGCCAACCGCAAGTCCTACGACGACCACAAGATGAGCGCCATCGATCGCATGCGGCTCAACGTGCAGGAGTTCCTCGACTGGATCGTGCCCGAGAAGGTGATGGCGGCGTTCAAGCGCGAGCAGCTGTCGGTCGAGAAGATCCTGGACAAGATCGTCACCATGTACATGAAGCAGCAGTGA
- Protein Sequence
- MVRSRRSISKEDASSVLADSGISLSSPGAPLLPEEEEEMIEKLCVTDDEDNADNVKDDRDDDDSKAGNTADDSNDEDDDDDEEEEDDDDDEEEEEDDKKASLSDYSADEPPSPPAPKRRRRQTASVAAGKGASSASPSPAKARKTYECHVCHKQFGGNTDLRRHLLIHTDERPYACTQCDKRYRQLVNLKNHTKSVHDAQRQFRCELCPKSFALKERLRLHMRVHSGEKPYSCPHCEKKFARGGQLQQHLVTHGAGVKSITCDKCSASFSSAANLRLHMKRHEEGPNHLCHICNEMFLNEMVLRAHVNSQHFKLKQFECDVCKKSIEDDDLAAHMKTHSHLKTHVCEVCNSLFTQKSQYNVHMRMHTGERPYQCRICWQSFAHSSVLKLHIRKHTGEKPFRCLLCKDEVAFSQLAHLKTHMKKIHKQENPYMCEGCHQFFKVKIDLQAHMEQSASCDSKSNERLQSDSTEMAALSHLRFLIAVLLKKISSEQKLHQLGYEKRLIDNVVVASLKLANRKSYDDHKMSAIDRMRLNVQEFLDWIVPEKVMAAFKREQLSVEKILDKIVTMYMKQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00351999;
- 90% Identity
- iTF_00351999;
- 80% Identity
- -