Basic Information

Insect: Coelopa pilipes
Gene Symbol: ZIPIC
Assembly: GCA_947389925.1
Location: OX376700.1:31619914-31624916[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 1.8 4.8e+02 2.3 0.8 15 23 30 39 28 39 0.91

2 27 0.005 1.3 10.3 1.5 2 23 56 76 55 76 0.97

3 27 0.0089 2.4 9.6 3.7 1 23 90 112 90 112 0.94

4 27 0.00063 0.17 13.2 1.1 1 23 121 144 121 144 0.97

5 27 1.1e-05 0.0028 18.8 0.5 1 23 149 171 149 171 0.97

6 27 7e-07 0.00019 22.5 0.8 2 23 177 198 176 198 0.97

7 27 0.00075 0.2 12.9 2.2 1 23 204 226 204 226 0.98

8 27 0.0013 0.35 12.2 3.9 1 23 231 253 231 253 0.95

9 27 0.00012 0.031 15.5 1.4 1 23 258 281 258 281 0.97

10 27 0.54 1.5e+02 3.9 0.2 9 23 336 350 334 350 0.92

11 27 1.5 4.1e+02 2.5 6.3 1 23 358 381 358 381 0.97

12 27 2.4e-06 0.00063 20.8 0.4 1 23 388 410 388 410 0.98

13 27 1.8e-06 0.00049 21.2 1.8 2 23 416 437 415 437 0.97

14 27 0.0036 0.97 10.8 2.3 1 23 443 465 443 465 0.97

15 27 0.00055 0.15 13.4 2.9 1 23 470 492 470 492 0.98

16 27 0.14 37 5.8 1.0 1 23 497 521 497 521 0.94

17 27 8.7e-05 0.023 15.9 5.2 2 23 571 593 570 593 0.96

18 27 0.00014 0.037 15.3 4.1 1 23 599 621 599 621 0.97

19 27 2.8e-05 0.0075 17.4 1.7 2 23 627 648 626 648 0.97

20 27 0.00088 0.24 12.7 2.3 1 23 654 676 654 676 0.98

21 27 0.0005 0.13 13.5 0.2 1 23 681 703 681 703 0.96

22 27 0.0005 0.14 13.5 1.1 1 23 708 731 708 731 0.97

23 27 1.6e-05 0.0044 18.2 2.1 3 23 802 823 800 823 0.93

24 27 9.8e-06 0.0026 18.9 0.5 1 23 829 851 829 851 0.96

25 27 5.1e-07 0.00014 22.9 0.3 2 23 857 878 856 878 0.97

26 27 0.0019 0.51 11.7 2.7 1 23 884 906 884 906 0.97

27 27 0.00017 0.047 14.9 2.7 1 23 911 933 911 933 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	1.8	4.8e+02	2.3	0.8	15	23	30	39	28	39	0.91
2	27	0.005	1.3	10.3	1.5	2	23	56	76	55	76	0.97
3	27	0.0089	2.4	9.6	3.7	1	23	90	112	90	112	0.94
4	27	0.00063	0.17	13.2	1.1	1	23	121	144	121	144	0.97
5	27	1.1e-05	0.0028	18.8	0.5	1	23	149	171	149	171	0.97
6	27	7e-07	0.00019	22.5	0.8	2	23	177	198	176	198	0.97
7	27	0.00075	0.2	12.9	2.2	1	23	204	226	204	226	0.98
8	27	0.0013	0.35	12.2	3.9	1	23	231	253	231	253	0.95
9	27	0.00012	0.031	15.5	1.4	1	23	258	281	258	281	0.97
10	27	0.54	1.5e+02	3.9	0.2	9	23	336	350	334	350	0.92
11	27	1.5	4.1e+02	2.5	6.3	1	23	358	381	358	381	0.97
12	27	2.4e-06	0.00063	20.8	0.4	1	23	388	410	388	410	0.98
13	27	1.8e-06	0.00049	21.2	1.8	2	23	416	437	415	437	0.97
14	27	0.0036	0.97	10.8	2.3	1	23	443	465	443	465	0.97
15	27	0.00055	0.15	13.4	2.9	1	23	470	492	470	492	0.98
16	27	0.14	37	5.8	1.0	1	23	497	521	497	521	0.94
17	27	8.7e-05	0.023	15.9	5.2	2	23	571	593	570	593	0.96
18	27	0.00014	0.037	15.3	4.1	1	23	599	621	599	621	0.97
19	27	2.8e-05	0.0075	17.4	1.7	2	23	627	648	626	648	0.97
20	27	0.00088	0.24	12.7	2.3	1	23	654	676	654	676	0.98
21	27	0.0005	0.13	13.5	0.2	1	23	681	703	681	703	0.96
22	27	0.0005	0.14	13.5	1.1	1	23	708	731	708	731	0.97
23	27	1.6e-05	0.0044	18.2	2.1	3	23	802	823	800	823	0.93
24	27	9.8e-06	0.0026	18.9	0.5	1	23	829	851	829	851	0.96
25	27	5.1e-07	0.00014	22.9	0.3	2	23	857	878	856	878	0.97
26	27	0.0019	0.51	11.7	2.7	1	23	884	906	884	906	0.97
27	27	0.00017	0.047	14.9	2.7	1	23	911	933	911	933	0.97

Sequence Information

Coding Sequence: ATGCAACGAAACAGCGGAACAAAGCAAATGCGGTTAAAGAAGAAGTGCAAGAATCGTATCCGGAAGATGAAGTTGATGATGACGAATAATCTTCGGAGTCACATGCGTTCAATGCATCAAGCAGAGTATGAGAAGCGCATCGCTGAGAACCTTGAAACAATGGTACAATGTGATATTTGTAAGAAAAAATTGTTGAAAAAGAACTTCGAGAAACACATTATGACTCACGAACGAAAGGAGAAGGAAGCGGCGGAAGGCACTGCCAAATTCCTTTGTGCATATTGTCCGCGCGAATGCAAGAACCAAAAGACTCTGGCTCATCATGAAAAACTGCACCAGAGTGAGGCTTCTGGAATTATATATCAATGTGTGGATTGCGAGCGTAACTATGCAACTATACAACACTTGGAGCAGCACCGGAAGCAGGCGCATAAGGAACGCGATCATGTCTGTCCCATCTGCGGAAATGCTTTTAAGCTGAAGAACCAACTAGTGAATCATATGAAGTTACATCTAGAAAAAAATATTCCTTGTCCGCATTGCGATAAGAAATATGCGCGACAATTCGATTTGAATGTGCATCTGCGTAGCCACACTGGGGAATTGCCTTACGCCTGCCATTTGTGCGACAAACGATTCGCAATAAAGGTTCGTCTCACCTATCATTTACAAAAGCACATGGGTGTGAAGCATCGTTGTAAGGAGTGTGGTGCAGAGTTTAATTCCAAACAGAAACTCAAATCGCACTCCTACAAGCACACGGGCATGCCGTATCGTTGTGAGATGTGCGATCACGGCTTTGCCAATCGCGATGTTTTCAAGCGCCATTTGCTGCGCGTGCACAACACTACAATGACCGACGAAGCATTGGTGGAAATGTTCCAGCGCAACACAGGGAAAACAACTCGCATACGACCGATCGATGAATTGGAACAATATGTTTTGAAGACCGAAGAGGAGGAGGTGGTGGAGGAGTTCATGTCGAACGAAGACGAGCTCAGCATGTCCTTTACGAACCAAGCTAAACTCAGCAAACACGAGGAAGTTCACAACCCGATGCGCTCGCGGAACCATCAGTGTGACTTCTGTGAGTCGAAATTCTACACCACGTACGACAAGGACCACCACATGAAACGTGTCCATCTCTCGAATGAGAGGGCGTTCGTTTGCTCCGTGTGCGGCAATGGCTTCAAAGAGAAGTCGCAACTACGTAACCACATGATGCTGCACACCAACAAGACCATCTCGTGCCCACACTGCGACAAAAGGTACGCCCGCCAAACCGACTTCCGGGTCCACCTGCGAAGCCACACCGGCGAGCTGCCCTTCGCGTGCCACCTGTGCGAGAAGCGGTTCGCCATCAAGGTGCGACTCACATACCACCTGCAGAAGCACTTGGGAATCAAGCACAAGTGCAACCTGTGCAACGCGGTCTACAATAGTCGTGGCAAGTTGCGTATGCACATGTTCAAGCATACCGGGATGCCGTATCGGTGCGAGAAGTGTCCGCAGGCGCAGTTCTCCAAGCGAGAGCGCTTTCGCCTGCACATCATGCGTGTGCACAATCGAATGCCCAGCGAGGACGAGTTGACGGCCAATTTCGAGCGAAACACAGGGAAGACGATACGAATCAAGGAGCTGGACACAGTTCCGAGCGCTCAGCCCGAAGAGGCCGGCAGCACCCTGCAGCCGGAGCAGGAGCCTTGTATTTCGTGCGAGTCCTGCTCCAAGTGCTTCCACTCGCAGCAGGAGCTGAAGAAGCACATGCGCAGCGTACATGTGTCGGAGCGCAGTCACGAGTGCAGCATTTGCGGGAACAAATACAAGCTGAAGGCCCATCTCAAAAACCACATGAAGCTCCATCTCGAAAAGAACATTCCGTGTCCGCATTGCGACAAGAAGTACGCGCGTCACTTCGACCTCGACGTCCACCTGCGCAGCCACAGCGGCGAGTTGCCCTACGCTTGCCATCTGTGCGAGAAGCGCTTCGCCATCAAGGTACGTCTCACCTACCACCTGCGCCGGCACGAGGGCGTCAAGTACGCGTGCTCCGAGTGCGATGCCGCCTTCAACGAGCGCACCGAACTGCGCGTGCACACGTTCAAGCACAAGGGCATGCCCTACCGGTGCGAGCGCTGTCCGGCGCAGTACGCCAACCGCAGCAAATTCCAGCGGCACTTGACGCGCGTGCATTGCTATGCGCCGACGGACGAGGAGTTGAACGCAATGTTTGCCAAGCACACTGGGAAGAAGGCGCACATAGAGGAAGTCTCTTGTCGACCGAACGACCTTCCGGGGGCCGGGTGCGCGGAAGATTCAACACAAGAGTTCACAAAACAAAAGTACCTGGCCATGCACGAGGAAGGCGCTCACCTGCTCAAGCAGCGCGATCCGCAACATTTGTGTCCCGAATGCCCGAAGAAGTTCTTCCAGCAGAAGCATCTCCAGGCGCACATTGGACGCGTCCACACTGAGGTGCGCAAACATGCGTGCACCATCTGTGGCAATGCGTTCAAGGGCCGTTCCCAGCTCTTGGCCCACATGAAGCTGCACATGGAGAAGAATCTCAGTTGCCCGCAGTGCGATAAGAAGTACGCACGACGCGCGGATCTGACCGTCCACCTGCGCACGCACACGGGCGAGTTGCCATTCGCGTGCCACCTGTGCAACAAGCGATTCGCCATAAAGGTGCGCCTGACCTACCACCTGCAGAGGCACGAGGGCGTCAAGCATCCGTGTCCACATTGCGATGTGGTTTACGACAACCGCAACAAGCTGAAGGAGCACATGTTCAAGCATACCGGGATGCCGTATCGTTGCGAATACTGTCCGTGTGTGGAGTTCTCCAGGCGGGTGCGGTGA
Protein Sequence: MQRNSGTKQMRLKKKCKNRIRKMKLMMTNNLRSHMRSMHQAEYEKRIAENLETMVQCDICKKKLLKKNFEKHIMTHERKEKEAAEGTAKFLCAYCPRECKNQKTLAHHEKLHQSEASGIIYQCVDCERNYATIQHLEQHRKQAHKERDHVCPICGNAFKLKNQLVNHMKLHLEKNIPCPHCDKKYARQFDLNVHLRSHTGELPYACHLCDKRFAIKVRLTYHLQKHMGVKHRCKECGAEFNSKQKLKSHSYKHTGMPYRCEMCDHGFANRDVFKRHLLRVHNTTMTDEALVEMFQRNTGKTTRIRPIDELEQYVLKTEEEEVVEEFMSNEDELSMSFTNQAKLSKHEEVHNPMRSRNHQCDFCESKFYTTYDKDHHMKRVHLSNERAFVCSVCGNGFKEKSQLRNHMMLHTNKTISCPHCDKRYARQTDFRVHLRSHTGELPFACHLCEKRFAIKVRLTYHLQKHLGIKHKCNLCNAVYNSRGKLRMHMFKHTGMPYRCEKCPQAQFSKRERFRLHIMRVHNRMPSEDELTANFERNTGKTIRIKELDTVPSAQPEEAGSTLQPEQEPCISCESCSKCFHSQQELKKHMRSVHVSERSHECSICGNKYKLKAHLKNHMKLHLEKNIPCPHCDKKYARHFDLDVHLRSHSGELPYACHLCEKRFAIKVRLTYHLRRHEGVKYACSECDAAFNERTELRVHTFKHKGMPYRCERCPAQYANRSKFQRHLTRVHCYAPTDEELNAMFAKHTGKKAHIEEVSCRPNDLPGAGCAEDSTQEFTKQKYLAMHEEGAHLLKQRDPQHLCPECPKKFFQQKHLQAHIGRVHTEVRKHACTICGNAFKGRSQLLAHMKLHMEKNLSCPQCDKKYARRADLTVHLRTHTGELPFACHLCNKRFAIKVRLTYHLQRHEGVKHPCPHCDVVYDNRNKLKEHMFKHTGMPYRCEYCPCVEFSRRVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -