Cpil024805.1
Basic Information
- Insect
- Coelopa pilipes
- Gene Symbol
- bab2
- Assembly
- GCA_947389925.1
- Location
- OX376698.1:386676-388961[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 6.2e-08 33.0 0.0 3 45 428 470 426 470 0.90 2 2 1.3 4.5e+03 -1.8 0.7 4 20 573 588 573 588 0.88
Sequence Information
- Coding Sequence
- ATGGGAGGCCCGCCGCCGGCCCTGCTGCCGCCCGCCTCGGCCGAGGGCCAGACCtactgcctgcgctggaacaaccacaagtcgaacctggtcgagatcctggacgccctgatcaaggtcgagagctacgtcgactgcacgatcgtcgtcgacgaccaggtgcagttcaaggcccaccgcgtggtgctcgccgccaactcgccgtactttcagtcgattctccagaacgtgcccatggaccactgcagcatcatcttcccgggcgtgaaagccttcgagatgcgcgccctgctcgagtacatgtacaccggcgaggtgaacgtcacccagagccagatcccgaagatcatgcgcatcgcggaggagctcgaggtcaaggggctcttcgacatGGCCGACCTCAAGGAGAAGTTCAACAAGCTGGGCGACGAGCACGCCGAGCGCGCCGGCAACCCCTACGCGAGCTCCACCGGGCCCCCCGGCGCCTACGCCTCGGCGGCCACATCGTCCACGACACCGCCCAACGGCTCCAAGCCTGAGCTCGCGGACGGGCTGCACTCGTCCTCGGTGATCTCGACCTCGAGCAACGTCTCGCCCTCGGCCGCGCCCTCGAGCAGCTCCTCGCCGCCCTACAGCAGCTACAAGTCGCCCTACGCCAGCCTCTACTCGAAGTCGCCGGGCCCCTCGGCGCCCCCAGCCTCGACCGCCAACGCCGCCCTGACCTCCAGCTCGACCCTGACCTCGACCTCTGCCGCCGCCACCGCCCAGACACCCTCGCAGCCCGCCGCCGGCGCCGACCGCGCCCAGTGGCCCATCTCGCCCGGAATGCCCTCGGCCGCCGCGGCCGCCGCCATGCTCAGCTCGGTGTACGAGTCGGCGCCCGACATGAACCCACTCAAGCGCAAGAAGCTCTCCTCGATCTCCAGCATGCTGATGAACCGCGACACGCCCATCCTGCGCAACGTGCTTGCCCAGACGAACCCGGCCGACTCCTCACAGCCGATGCCCCTGATGCTGCCCGCGGCGGGCAAGGGCGCCGATAAGGGGCCCGCCGACAAGGCCGCGGGCGCCGCCGCCGGCCACAGCAACAACCACAGCTTCAACGGCTCCGACTACAGCAGCGAGAAGAAGTACCAGGAGGAGCCGCACTCGCCGTACACCGACCGCTCGTTCGAGGACGACGGCTTCGAGCCGAAGGGCAGTAACTTCGGTGGCAACTTCGGGTCGGGCAACGCGGGCGGGCAGAAGCCCGAGTGGAAGCGCTACAAGCAGTACACGCGCAACGACATCATGTCAGCCATCCAGTGCGTGCGGGACGGCATGAGCGCCCTGCAGGCCTCGCGCAAGTTCGGGGTGCCCTCGCGCACCCTCTACGACAAGGTGAAGAAGCTGGGCATCACCACCGGGCGCCCGATGAACCGCACCATGAAGCGCAGCCCCAGCAGCGTCGAGTCCTCGGCCGCCTTCCCGTACGCCCACGGTTATGGCCAGTCGGAGCCGCTGCTCTCGTCCCTGCACGAGGGCCGGGAGGCACGCGAGGAGCGCGAGCTCCAGCCTAAGGAGCACCTGCGCACCGAGCACCCGCACCCGCACTCCCACCACATGCCGCCCACCATTCCGCACCATGCCGCCGCCCTTCTAGACCACGCCTTCCTGCAGCAGGCGCTCGAGAACCGCGGCGGCGACATCGCCGGCCGCGAGGCCCTCCACGCCATGGCCCTGGCCGCCGCCGCCCACGCCGCCGTCAACCGCATGTCCACCAGCCCCGGGCCCAACGGCACCGCGCGCTCGCCCAGTCCAAGCTTCGCCCTGAAGTACGCCCGCGGCGAGCACGAGCTGATGCTGGAGCGCGAGAAGGAGCGCCGCATGCTGGACCGCGAGCGCGACCTGGATCGTGAGCGCGAGCGGGAGTGCGACCGTGACCGCGACCACAGCGAGCGCGAGCGCGACGCCGACGACGAGGACGACCACGACCACGTCGAGGACCTGTCGGTAGCACGCAAGGACTGCCTCTCACCCGAGGCCCGCCGCGCCGACTCGCCCTTCCCGTCGCCGCCGCCCCCGGCGCCACCCTCGAGCAGCGAGGGCGGGGTGATCGTGCCGCCGATGGGATCCAAGGCGGCTCCGGCCCCAGCCAGCAGCAGCAGCGACGACTTCCTCATGATCAACGAGAGCGCCGTGAAGCGCGAGATCATCACCGACGACGGGCGCGCCGACTGA
- Protein Sequence
- MGGPPPALLPPASAEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQNVPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLGDEHAERAGNPYASSTGPPGAYASAATSSTTPPNGSKPELADGLHSSSVISTSSNVSPSAAPSSSSSPPYSSYKSPYASLYSKSPGPSAPPASTANAALTSSSTLTSTSAAATAQTPSQPAAGADRAQWPISPGMPSAAAAAAMLSSVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQTNPADSSQPMPLMLPAAGKGADKGPADKAAGAAAGHSNNHSFNGSDYSSEKKYQEEPHSPYTDRSFEDDGFEPKGSNFGGNFGSGNAGGQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSVESSAAFPYAHGYGQSEPLLSSLHEGREAREERELQPKEHLRTEHPHPHSHHMPPTIPHHAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAVNRMSTSPGPNGTARSPSPSFALKYARGEHELMLEREKERRMLDRERDLDRERERECDRDRDHSERERDADDEDDHDHVEDLSVARKDCLSPEARRADSPFPSPPPPAPPSSSEGGVIVPPMGSKAAPAPASSSSDDFLMINESAVKREIITDDGRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00351793;
- 90% Identity
- iTF_00352563;
- 80% Identity
- iTF_00352563;