Cpil028053.1
Basic Information
- Insect
- Coelopa pilipes
- Gene Symbol
- retn
- Assembly
- GCA_947389925.1
- Location
- OX376698.1:33206786-33208275[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-12 2.7e-08 34.9 0.0 29 79 4 52 1 61 0.89
Sequence Information
- Coding Sequence
- ATGGCCAAGTCCGTGCTGGACCTGTACGAGCTCTACAACCTGGTGATTGCGCGCGGCGGCCTCGTCGACGTGATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGCCTGCACCTGCCCTCGAGCATCACCAGCGCCGCCTTCACGCTCCGCACACAAAGTCGTCGTTTTGCCGACTCCTTCCATCCAACTCCTGCCGTCGACTCCTGCCGTCGACTCCTGCCGTCGACTCCTTCCACCGACTCCGCTGTCGTCGGTTGTCGGTCGTCGCGGCCCCCCAGTGACGACTGCGACCGCACAATAAAACCATTGACAACATTTCTTTGGCCACATTGCACAACAATGACAACAGCAACAACAACAACAACTGTGGGGGCCTGCGGGGGCGACGGCGGCGGCGGCGGCGGCGGGGCCTCCTTTGGTCCCGAAGTTGACAAAAACACAAACCACAATAACAATAACAACAACACCAACAACGGCAACAAAAGCAACAGCGAAGACAACAACCACTTCGGAAATCAGCAACGATAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQSRRFADSFHPTPAVDSCRRLLPSTPSTDSAVVGCRSSRPPSDDCDRTIKPLTTFLWPHCTTMTTATTTTTVGACGGDGGGGGGGASFGPEVDKNTNHNNNNNNTNNGNKSNSEDNNHFGNQQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -