Cfri006678.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- nfxl1
- Assembly
- GCA_017309665.1
- Location
- CM029563.1:32887717-32890852[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 2.1e+04 -8.1 6.4 15 19 153 157 152 157 0.82 2 21 0.15 1.6e+03 -0.5 0.8 4 10 188 194 187 194 0.95 3 21 3e-08 0.00032 20.9 17.0 1 19 202 219 202 219 0.99 4 21 0.91 9.7e+03 -3.0 1.7 5 10 244 249 244 249 0.94 5 21 0.00021 2.3 8.6 13.2 3 19 257 274 255 274 0.91 6 21 0.48 5.1e+03 -2.1 0.9 5 10 298 303 298 303 0.93 7 21 3e-07 0.0032 17.7 14.4 1 19 309 327 309 327 0.99 8 21 2 2.1e+04 -4.6 2.6 13 18 343 352 342 357 0.58 9 21 1.2 1.3e+04 -3.4 0.3 1 8 352 358 352 359 0.59 10 21 4.8e-08 0.00051 20.2 11.2 1 18 362 379 362 380 0.96 11 21 2 2.1e+04 -5.0 2.3 5 10 403 408 403 408 0.91 12 21 1.6e-06 0.017 15.4 18.8 1 18 414 431 414 432 0.98 13 21 1.2e-07 0.0012 19.0 14.0 3 18 443 458 435 459 0.85 14 21 0.094 1e+03 0.1 10.8 9 19 504 514 495 514 0.88 15 21 0.0052 56 4.1 6.1 1 11 526 535 526 536 0.95 16 21 0.26 2.8e+03 -1.3 1.1 6 10 595 599 594 599 0.90 17 21 3.8e-06 0.041 14.2 5.4 1 12 605 616 605 616 0.97 18 21 1.4 1.5e+04 -3.7 1.2 15 19 629 633 629 633 0.86 19 21 0.021 2.2e+02 2.2 15.5 4 18 646 660 644 661 0.91 20 21 1.8 1.9e+04 -3.9 1.4 8 13 666 671 665 671 0.73 21 21 3.2e-06 0.034 14.4 10.2 1 18 710 729 710 730 0.86
Sequence Information
- Coding Sequence
- ATGCCTACAAACAAAATAAACCCGAAAAGTGTTAATCAAAAATTTTCTGAATTCCAAAGTCAGCATATCGAATCGGCAAAAAAATTAATTGATGCCTACGAATCGAGTTCCGAGGAAGAAGATCTTGATGAACAAACAATTTTAACAACTTTATATGAAAAATATAATGTGAACATCAGTCGAGAACAAGGTTCGAATAAGACTTTGAGCTTCTTGGAAAATGCACTACATTCCGGAGCAGCCGCTTGTCTCATCTGCATTGGGAGTATCAAACGAGCCGAAGCCATTTGGTCGTGTAAGAACTGCTTCTGTTTCTTCCACTTGAACTGCATCAAGCGGTGGGCCAACGACAGCATTGCGCAAGTGAAATCCCAATCGAACCAGCCAGAGCAAGGCTACTATAACCATTTAGGGGTCTATGTGCCGCCGAAGAAATTGAAACCGGCCAAGTGGTGCTGTCCCCAATGCAGACATGACTACGAACCAAGTCAACGTCCCACACAATATGAATGTTTCTGTGGCAAGGAACTCAATCCAGCCCAGCAACCATGGTTGATTCCACACTCTTGTGGTGAAACTTGTAGGAAAAATCTACAACCTGAGTGTGGACATAAATGCTTGTTACTCTGCCACCCAGGACCTTGTCCTCCCTGTCCCCAAAATGTATTCATCTCGTGCAAATGTAAGAAATCTCCACCGAAATCTGTGCGATGTTTTCAAAAGACGTGGACGTGTGAAAACAAGTGTACTAATATTCTGCCGTGCAAAATGCACCGATGTGAAAGCGGATGTCATGAGCCCGGAAAATGCGCTCCGTGCACTCGGACCAGCAAGCAATGGTGTGTTTGTAAAAGTGAGGAATCCACACGGAGCTGTTCGGAGATGCCATGGAGGTGTAACAAAGTCTGTAATAAAAAGTACGAATGCGGAAATCACAACTGCAGAAAAGTATGCCACTCAGATCCTTGTGGTGAGTGTCCACTGGGATTGCCGCGATCCTGTCCGTGTGGGAAAACAAAAAAAGTGGGACCATGTAATGAAATAGTGGAGCCTTGCGGCGATACTTGCCAAAAGTTACTTCCGTGTGGAATTCACAATTGCACACAAAGATGTCACAAGGGACAATGTAGTTTGTGTTTAATTGTCATAAATAAAAAATGTCGATGCGGAAAATATGAAAAAGAATTGCCATGTTGGAAATCATTCACGTGTGAAACGAAGTGCAAGCGAGTTCGGGAGTGTGGAAAACATCCATGCAATAAAAAATGTTGTGATGGTCAATGCCCACCATGTGACAAGGTTTGTGGGAAACCTCTATCGTGTAAAAAGCACAAATGCAAATCCATATGCCATGATGGTCCTTGTTATCCTTGCGATAAAATTTCGCAAGTGAACTGTCGATGTGGAAGCACAACGAAAATGGTTCCATGCGGTCGAGAGCGGACAGGTCGCATAATATGCAATGAATCATGCAGAATTTCATCCAAATGTCACCATGAGAACAAACATCGTTGCCACAAAAACGAATGCCCGCCCTGCAGTCAAAAATGTGGACTCCTGAATGAGGATAGTAAATGCGGTCATGTATGTGAAGCCAGATGTCATGCAGCTGTAAAAGTTTGGAAAAGTTCCGCCGAAAGAAAAGCCCTGTGGCAGAATAGCGCCAAAGAATTTCAATATAAAAAACTTCCGCACCCGAAGTGTGAAGTAGGTGTTATGGTTACTTGCATTGGTGGTCACGAAAATGCAGAGTGGCCCTGCTGGAATTCGAAGCCAACATCTTGTCAACGTGTTTGCAATCGCCGATTGAATTGTGGTAATCATAAATGTCCATTGGTGTGCCATTCAGTAGCGGATAAGACGAATATGACGCAACAAGAAGGTTGTCAAAGCTGTACTGAGGGATGCCAGATTCCACGGCCAAGGGGATGTACACATCTGTGTCCTCGTCCTTGTCATTTGCCTCCTTGTAAGCCATGCAATGCAGTGATTAAGGCAAAATGTCATTGTGGATTATCACAAGTCGTTTTCACATGCTCCGAATACAATAATGAAAATGCCGACAATTTGGAAGAATTCCAGGCGAAAAAAAGAAGTTGTGGAGGACGTTGCATAAAAAATTACCCGTGTGGACATCGTTGCACCATGGTATGCCATTCTGGGAAATGTGCGAACCCCGAATCATGTCGCAAGAAAGTGCGAATTTTTTGTGAATGTAAACGGATTAAAATAGACATCACATGCGACAAACATCGTGCTGGAGTTACATCTATTAGTTGTGATGAATATTGTGCAGAGACACGCAATGCACTTGAAAAACTACAGCAAGCAGAGAGAGAAAAACAAAAGCTTTTGGAAGAGGAAAAAAATCGAATCGAGTTAGAACAGTACCAAAAGCGATTTGGGAAAAAGAAGTACAGAGAAAGAAAAATTGCGGTAGAAAAGGTAAAAGCTCCCATCAATTGGAAATTAATATCTATATACATCGGTGTATCGCTCGCCATTGTTTTGGCTATTGGAGTAGCTCTCTATGAATAA
- Protein Sequence
- MPTNKINPKSVNQKFSEFQSQHIESAKKLIDAYESSSEEEDLDEQTILTTLYEKYNVNISREQGSNKTLSFLENALHSGAAACLICIGSIKRAEAIWSCKNCFCFFHLNCIKRWANDSIAQVKSQSNQPEQGYYNHLGVYVPPKKLKPAKWCCPQCRHDYEPSQRPTQYECFCGKELNPAQQPWLIPHSCGETCRKNLQPECGHKCLLLCHPGPCPPCPQNVFISCKCKKSPPKSVRCFQKTWTCENKCTNILPCKMHRCESGCHEPGKCAPCTRTSKQWCVCKSEESTRSCSEMPWRCNKVCNKKYECGNHNCRKVCHSDPCGECPLGLPRSCPCGKTKKVGPCNEIVEPCGDTCQKLLPCGIHNCTQRCHKGQCSLCLIVINKKCRCGKYEKELPCWKSFTCETKCKRVRECGKHPCNKKCCDGQCPPCDKVCGKPLSCKKHKCKSICHDGPCYPCDKISQVNCRCGSTTKMVPCGRERTGRIICNESCRISSKCHHENKHRCHKNECPPCSQKCGLLNEDSKCGHVCEARCHAAVKVWKSSAERKALWQNSAKEFQYKKLPHPKCEVGVMVTCIGGHENAEWPCWNSKPTSCQRVCNRRLNCGNHKCPLVCHSVADKTNMTQQEGCQSCTEGCQIPRPRGCTHLCPRPCHLPPCKPCNAVIKAKCHCGLSQVVFTCSEYNNENADNLEEFQAKKRSCGGRCIKNYPCGHRCTMVCHSGKCANPESCRKKVRIFCECKRIKIDITCDKHRAGVTSISCDEYCAETRNALEKLQQAEREKQKLLEEEKNRIELEQYQKRFGKKKYRERKIAVEKVKAPINWKLISIYIGVSLAIVLAIGVALYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -