Cfri000803.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- pnr
- Assembly
- GCA_017309665.1
- Location
- CM029561.1:40313014-40325542[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4 5e+03 -2.6 0.4 17 26 39 47 34 49 0.82 2 3 6 2.1e+04 -5.5 3.6 18 26 511 519 502 523 0.57 3 3 8.4e-18 3e-14 52.6 8.0 1 35 552 585 552 586 0.97
Sequence Information
- Coding Sequence
- ATGAAGGGACTTTGGAGTGGGAAGATGAACAAGCATGAGGGGACCGGAGGAAGAAGCATGAAGAAGAGCAGTGATGAGAATTCTGAGTTTTTGTCGGTGTGGGTGACGTCTGTTGTCGGTGAGCGTGTGTGTGCGCCGTGTCCGTGCAGGAAGTCCTTCGTTGTGTGGGTGCGCGAGGGGCGTCCGGCCCAGGGATCGCGGAGGGATCGCGATGAAAACCACGACAACAACGACGACGACGACGACGAGGTGCCAACGGCGCAATGCGTCGCGTCGTCATTCACGTTACTCTCGTTGAAAAATCGCAGCGAAAACGTCGACTCAGGTTGGAAACCTCAGAAAACACCCAGCGAACACCGAACACCGCAGAACAAACGACACCACGGCGCCGGCCACAACACCAACAACAACGACTCCACAACCAACAACGGCTCCAACAACAACGATTCCAACAAAAACGACTCCACCAACAACAACCATTCCAACAACAAATCGTATACTATATATCGTATCGTATATATAGGAAATCGGGCCATCGGGTCCCCAGTTGTTGACGCGTTATCACCTCTTACTCTGAGCCATGATAAGGACGAGGGCCAGAGACATGGCCAGGTAGGGATGGGTTCGGACCAAGACCTGGGCCAGGGTCAGGACACGGAGCAGCACACCAACCTCTTCTTTTATGGCTCCGATCGTGGTCACATGATGTGGATCCGACCCTTCGTCCCCTCCGACAATGGGTCGAATGGCGTCGGCGTCGGTCCGCTGGGACGGACGCAGCAGCGACGGATCCTGACGACCGCAGGCACCCTTGAGGTGAACGAGCCGCGCGAGTCGGACCCGAGCGAGGCGGCTCCGGAGTTCCATCACCACAATCACTCGCCCGCCTACGTCCAGATGGCGCCGCGGAATCAGGACGATCAGGCCCCGCCCACCACCGTCTACACGTACGCCACCACCGAGAATGGGCAGCAGATCTTCCACGGTGGGACGACGCTTCGCTTCGAGGACGCCAACGGCGAACGGTACAGCATCATCGATGCCGGCCCCCAATCGACATCGTCGACGATCTACTACGATTCGGCCGTGGTCGAAGCAGCGGCGGCTGCGGCCGGTGGCGGCCATCCGAATGAGGCGAAAACCTTCACCGATCTGGGCAACGTCTGCAACGTGATCAACTACCAGCAGGGCCCGACCTATCTCGGCCAGGGCAACGCGATCTACAGCGTCCCAGTGACGGGGCCGCTGCTCTGCAAGACCGACCCCAACCTGGGCGCCGTCCGTCAGCAGAATCAGTACGCGTCGATGTCCGTCTACGAGTCGGTGTCGTCGCCGGCATCAGCGGAGTTGTGGGCTGCGACCGCCTCGGGCGTGGAGTTCTCGAATGTCGGATACAATCCCTATCATCACCAGGTGGTGGATGATTACAACCCGAACAACATGACGACATCGCACTGGACCTACGATCCGACGGTGGGCAACCAAATGCCCGAGATGGTGAAGTGCGAGTTCTGCCATTGCATTCGACGCGGCACCGAACTCGTCTGCCCCAATTGCACCGTGCATCCGGCGCGACAGACGGTGCGTCTGCCGCCGCGACAGGCGAAGCCGAAGGCGTCGGCGGCGGCGAATAATCGACGGAATGGGATCACGTGCGCCAATTGCTCGACGTCGACGACGACGCTGTGGCGGCGCAACAACGAGGGGAACCCGGTGTGCAACGCCTGCGGGCTCTACTACAAGCTGCACAATCAGAATCGGCCGGCGACGATGAAGAAGGAGGGCATCCAGAAGCGCAAGCGCAAGCCGAAGAGCAACGGGGCACCGCCGATCCGCACCACCGGCCAGCTGCCCAGCATGCAGCAGGGCGGCAACATCATGATCACGCCCACGCTGTATCCCTCCCAGGTCCAGGGCATCGGGCTGCCCACCCTCAACGGCCAGCCCCAGAGCCTCGGCGGCGGCGGTGGAGGAGGCGGTGGCGACCTCCACGATATGTCGACGTCGAGCGGTAGCCGCAGCCTGCCGCTGGGCCACGGCGATCTCGGCATGCCGCGCCACCATGGGGTGTCCGCCCCCGAGAACAACCACTCGCCCTTCAGCAACCCCCCCTCGCAGAGCCAGTCGCCGCACCTGCCCAACTCGAGCGCCCTCAATCGGCAGATCACGCAGACGGTCCCGCCGATCGATGGATCGCGCACGGCCAACGGCGAGATTCCGACCAGCGTCATCACCCGGACCGGGCTGCCCGAGCGATCGTCCAACAACTGA
- Protein Sequence
- MKGLWSGKMNKHEGTGGRSMKKSSDENSEFLSVWVTSVVGERVCAPCPCRKSFVVWVREGRPAQGSRRDRDENHDNNDDDDDEVPTAQCVASSFTLLSLKNRSENVDSGWKPQKTPSEHRTPQNKRHHGAGHNTNNNDSTTNNGSNNNDSNKNDSTNNNHSNNKSYTIYRIVYIGNRAIGSPVVDALSPLTLSHDKDEGQRHGQVGMGSDQDLGQGQDTEQHTNLFFYGSDRGHMMWIRPFVPSDNGSNGVGVGPLGRTQQRRILTTAGTLEVNEPRESDPSEAAPEFHHHNHSPAYVQMAPRNQDDQAPPTTVYTYATTENGQQIFHGGTTLRFEDANGERYSIIDAGPQSTSSTIYYDSAVVEAAAAAAGGGHPNEAKTFTDLGNVCNVINYQQGPTYLGQGNAIYSVPVTGPLLCKTDPNLGAVRQQNQYASMSVYESVSSPASAELWAATASGVEFSNVGYNPYHHQVVDDYNPNNMTTSHWTYDPTVGNQMPEMVKCEFCHCIRRGTELVCPNCTVHPARQTVRLPPRQAKPKASAAANNRRNGITCANCSTSTTTLWRRNNEGNPVCNACGLYYKLHNQNRPATMKKEGIQKRKRKPKSNGAPPIRTTGQLPSMQQGGNIMITPTLYPSQVQGIGLPTLNGQPQSLGGGGGGGGGDLHDMSTSSGSRSLPLGHGDLGMPRHHGVSAPENNHSPFSNPPSQSQSPHLPNSSALNRQITQTVPPIDGSRTANGEIPTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -