Cfri011762.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- CSRNP3
- Assembly
- GCA_017309665.1
- Location
- CM029565.1:17062784-17065862[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.11 2.3e+03 -1.5 1.2 42 116 36 115 15 156 0.52 2 3 0.4 8.5e+03 -3.4 0.3 81 99 298 316 272 355 0.55 3 3 5.1e-97 1.1e-92 310.2 8.9 2 217 424 625 423 626 0.92
Sequence Information
- Coding Sequence
- ATGTTCAGACCTATTAAGAATTTCATAACTTTTATACAAAAGAATGCAAGTGGGACGTCTCTGTTTGGGGGAAGCACATCGGAGACTGAAGTAACGCAAGCATCAAAGAAGGCAACAGCAGCCGCAGCACCCGAAGCTGTCGCAGAAGAAAGTGAACGAGAGTTTGTTGCGGAGGAGAATTTTGAAAGAGATTTCGTAAAAGTTGCAGAAACAGCAAAAATGAATATCAACAACTTCAATTGCAGCAACGCCCGAAGCACTGCGGACTCGGCGACGTTGCAAAGTTTTGACGAGAACGACATTGAGACGCAGATTAAGAGCAGTATAATGCTTCGCAAACCCATTAATAGCAACAGCATTGGTAAAACTAGGAATGGCACCACATCTGCAGTCCTAAAGAAATCCATTAAAAACCATGATCATAATCAGAATCATGCCATTAATAATGAGTTGGAAGATTTTCAGCGAGATCCTCTGCAGAACGTGGTGGAGGATTTTTGTTCTGTTGGAAGTGAGGGTTTGGGGGAGGAAACCGAAGAATTTATCACTGAAGGAGAGGACGAGACAGTTTTCTTGGATTTGCCACAAGAACTAAAGGCCTTTCCAAATAGCGAAATAATTGTGCTCAATGAACCAGATCTCAATTCATCGCTCAACTCTGACGGCATTTCCGAAGATCCATTGGCAATCGATGAGATCATCGAACATGATGCTATAATCGAAGTCTCCAATCCTTTGGATTGTAACGCCGATGCTTCTGGGGACATACTCTGGATCAATATAGACGATATGAAATGCGAGGAAACGACAAGTACGCAAAATGATCCCTGCGAAATCTCGCCTTCAATGTCGCCTCAGAAATCATCAACTGTATCAAGCACCGATCAAGTGGATTCTACTCCCCAAGATAAATCATCGTCACAGGAAACCACCGAAGAACTACGTAGTGAAGGATCTGATTCTGGATTGGGATCTGAAACTTCGGCGCTACAAACTACAATCACCAGTCCAACCAACACAAATTCATGTACCCTCAGGCCAACAGTTGCCGAAACAATCGAAGAAGTTATGAAACCCACAACCGTAGTGGAAACGATAACAAGCCAGATCGAGACAGTCAAATCGACGGTTGACTCTATTATCACAAGTCCCACATCTTCCAAGAAGCCCTTGCGTTCAAATCTAAAGCGGCGCCTGGAGGCTGAAGATGATTCACTCGATGCGGCCACTGTAGATTCAGTGTCTGCAGTTTCTTCAGTACAAAAGAAACCAAAGCGTTCAATTAACTTTGACAGCGTGCAAGTGTACTATTTTCCACGTCAGCAAGGTTTCGGTTGTGTACCATCCGCAGGTGGTTGCACGCTCGGAATGGGAGCTAAACACGTGTCCGTAAAGAAACTCTCACTGGCCGAACATGCGGCTGAACTCAGGAGAGCACATCGGCAGCAATTGCAGGAAGTCAATCCGCGTGGCTCTTCCAGTGACGAGAGCGAAGAGAGTGAGGAAGACTATCTGAGCGAGGGAAGTGGCTCCGATTTGGATGCGGAGTCGAGCGGATTCTTGCAGCCTGTTTCGCCCAAGCAGAGACGAGCGCTGCTTAAAGCGGCTGGCGTTCGCAAAATCGATGCCAGCGAAAAAGCTGAGTGTCGTGATATTCGAAACTCGCGAGAGGTTTGCGGATGTTCATGCCGTGATTTCTGCGACCCAGAGACGTGTGCGTGCAGTCAAGCTGGGATAAAGTGTCAGGTTGATCGCGCAATGTTTCCTTGTGGCTGCTCGCGTGATGCTTGCGGAAATACAGTGGGACGTGTGGAATTCAATCCTTCTCGCGTCCGTACTCACTTCATACACACAATTATGCGATTGGAGATGGAGAGCCGGCATCAACAGAAAACGCCTTCTTCCAGTTTGGGATATAGTAGTTCCAATTCTACATCTTCCTCTACGGCTTTGAATCAAATGACCAGCAACTTCTACAGTATGCAACCTCAGTCTAACTACAGTTCAGGATACGCTTCTCCCGCCTACCCGGGTGATCCAACACAGAATTTTTATCAACAACAGACCCAGCAGTATCAAGTCGACAGTTGCTTAGAAACAAGCCTATTCTCAGGTGCTGCTACAGCCACGCCATCATATGGTGAATTGATGCCATCGTATGGTAATGATAACATAACAACCGTTACACCTTCATATAATGCTCCATTAAACTATCCATCGCTGCAGAATGCAATTCCCTCACCTGTAACATCGTACTCTGCCTACACCCATTCTTCCTCGAATTATCTCCAGAACAACACAAACTCCGTGAGCACCTTCAGTTCTTGTGCTGTCCCCTCGGCTCCTCCCTTCGGCACGGCCACGACAACCGTCGCCTCGTCGCTGTATTTAACAAACTGTGCCGCTTTAGAAACAACAACCGCCGCATCGACCACAATCAGGGCCAGCTCCACGGCGCTCGATGACAGTAGTTTTATTAGTTTGAACTCACCCGTGTCCAGTTCCTCACGTCTTTCGCAAATTAACGATTTGCTCCAACACAACCGCAATACGACAGCTGCCCTGGTGGCTGTAACGCATACAGCTAATACTTCTAATGTACTTTGCAGCCAGAATACATCCAGGGCGCTTAGCAACGATAACTCCATGAATGCCTCCATCAATACGCCTCCTATTGATTATGCGCACAAGAATTGTCTCGCTTTTGAGGAGATTCCATCACCACTGAATCCCACGCCCATCGTTGGTGTGGTGGAACCAACAGCTAACAAGTCCACCAATATTGCATTTAACGGAAGTGTGCCCACGAAACCTCTGCAAAATGAACCGCCTCCTGCTGCACTTCCCGGAGACACAGTTATCACACCAGTCGAACAACCAACTGTGGAAGTGACCAATTAA
- Protein Sequence
- MFRPIKNFITFIQKNASGTSLFGGSTSETEVTQASKKATAAAAPEAVAEESEREFVAEENFERDFVKVAETAKMNINNFNCSNARSTADSATLQSFDENDIETQIKSSIMLRKPINSNSIGKTRNGTTSAVLKKSIKNHDHNQNHAINNELEDFQRDPLQNVVEDFCSVGSEGLGEETEEFITEGEDETVFLDLPQELKAFPNSEIIVLNEPDLNSSLNSDGISEDPLAIDEIIEHDAIIEVSNPLDCNADASGDILWINIDDMKCEETTSTQNDPCEISPSMSPQKSSTVSSTDQVDSTPQDKSSSQETTEELRSEGSDSGLGSETSALQTTITSPTNTNSCTLRPTVAETIEEVMKPTTVVETITSQIETVKSTVDSIITSPTSSKKPLRSNLKRRLEAEDDSLDAATVDSVSAVSSVQKKPKRSINFDSVQVYYFPRQQGFGCVPSAGGCTLGMGAKHVSVKKLSLAEHAAELRRAHRQQLQEVNPRGSSSDESEESEEDYLSEGSGSDLDAESSGFLQPVSPKQRRALLKAAGVRKIDASEKAECRDIRNSREVCGCSCRDFCDPETCACSQAGIKCQVDRAMFPCGCSRDACGNTVGRVEFNPSRVRTHFIHTIMRLEMESRHQQKTPSSSLGYSSSNSTSSSTALNQMTSNFYSMQPQSNYSSGYASPAYPGDPTQNFYQQQTQQYQVDSCLETSLFSGAATATPSYGELMPSYGNDNITTVTPSYNAPLNYPSLQNAIPSPVTSYSAYTHSSSNYLQNNTNSVSTFSSCAVPSAPPFGTATTTVASSLYLTNCAALETTTAASTTIRASSTALDDSSFISLNSPVSSSSRLSQINDLLQHNRNTTAALVAVTHTANTSNVLCSQNTSRALSNDNSMNASINTPPIDYAHKNCLAFEEIPSPLNPTPIVGVVEPTANKSTNIAFNGSVPTKPLQNEPPPAALPGDTVITPVEQPTVEVTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -