Cfri009988.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- Bdp1_1
- Assembly
- GCA_017309665.1
- Location
- CM029565.1:38054294-38056920[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-09 8.4e-06 26.0 0.0 2 44 482 524 481 525 0.96 2 2 8.9 1.4e+04 -3.4 0.1 21 27 564 571 561 579 0.73
Sequence Information
- Coding Sequence
- ATGTCGATGCGAAGGCCCCGAATAAAGGCTTCGGCCAATCTGATGAGCTCCAAGAGAAAACCCAAAACTCAAGTGGACAAATTGACAGAAAATGACGACGAACGCAAGAAAACTGATGAAATTGATAACGTGCTAAGAGAGGATTCCACAAAGGCAAGCGGTGCATTGGACGCAGTACAAGATGCAAATGAGAATGAGGTCATTAATGCACCAATTGAGACAATTACGACAACTTCCCCAGTCAATGGTCACATGGCAGGCGAGAAGAGTGAAAGCCAAGTCAATGGTGCAATAGAAAAACCGACAGACAATTATGAGCCAGACGTGGATCAATCGAAGGATTGCGATAATGGCTTAGATAAGTCCACAAACAATGCATTAGAAAGCTCTCACGATATGGTAGACTATTCTCTGATTTCCAATGGAAATAACATCGATGATCCTGCTTCTCCCATTGGGGTGATGTCTGATCTTAATAATGGGGTTCACGAAGAAACGAATATCGAATCGTTATCAAATAATGAGAAGACTGAGGAGAAGGACTCATCTTTTAAATGTCCCCCAAATGTTACGTTCAATCGCAGCAACAGTTACAATGCTCCTGTTAGCGTAGCTGGAAGCGATGATGTATTTCATTCCGATATTGAGGAAAATGTCATTCAAATAGATTTGCAAAAGTCTCTCAATGCACAACCGATGTCACCAATGTCCCCGTCGAAGACGGTTTCGAGACAACGGATACGTGCAACACCAATATTTGGACAACGACGAAACAGCTTCGTGGGCACCTCGCCTTCTCCTCACACGGGCGGTGATGAATCTGGTGGTGAGTTCACTGGATCAACACATCGTCGGGAACGTCACTTTTCGGCTTCACTCAGTCAAACTTCCAATTCCTCTTCTTCGCATCCCTATCATCATTATACGCCTCATAAATATGTTCCCTCTATGGGGCGAATACGAACCGAATCCGGTTGTTCGGCATTCTCCGATTCCTATGCACCTTCCTCCAAATCTCGTAAGACTGACGATCAGCACCATCGTGCGCTATCGCGGCGTGATTTCGAAGCACGTTTTAATAATGGTGTCGTACCTGACAAATCCATGTTGAAAATGTTCGACCTCATCTACTACAATCCGGTAACAAATCCAATGGAACAAAAACCAAATATATCGGCTATTAAGCATGAGTCCAACCCCGATGATCCGAAGGCACAAAGCGAAGATATAAAACCAGATGCTGATAATTTGACAGATAGCTCCGCAATTCCTGTTCCACAGTTGAAACTCAATTCCAATGGCGAATTGATATTAGATGATAAGTCTTTGGAAATTGAAACCACTGCAGAGCAGGAAGCTCGTAAAGTTTTAGCGAATTCATCTTTGATCTTCTTGGATGAAAACACCGGCATGAATGGTTTCTATAAGAAGCAGAAACGAACAAAAGAATGGCCTCCAGAGGAGACAATAAAATTCTATCGATGCTTACAAACTGTTGGCACTGATTTCTCTCTTATGGGTCAACTGTTTCCGAATCGTACACGACGCGATCTCAAGTTGAAATTCAAAAAGGAAGAACGCTGTAATTTGGCGTTGATAAACAAAGCTCTACTTTATCCAAAAATATTCAATATTGATGAATTGAAAGTACAACTGGAAACAGAGGAGCGTGAGCGAGAAGAGGCGGAAAGGAGGTGGAAGGAAATTAAGGCCCAGGAAGCGAAAAGTTTGAAAAAGGTTCACATTAATGCAAGTGCAGGCGCTCGAGTCATGGCCCTAGGCAATGAAATATATCAAAATGAAAATATAACGAAACGTAAATTCAGCAGCCGTCCAAAAAAGGCATACGTCGAAGCAAAGAACACAAATGGATATTCAGAGGACAACACTCTAGATGAACAACCAAAAAAGAAAAGAAACCGCATTCAAAAGAAAAATAACATTATAGAAAATGATTCTTCAAATGGATATAATAGTGAAATCAAGTATGAAACAATCAAAATAGAAAACGGTCATGTCGACAATCAAACGCGATTAGTTATTGATCCGAATCAATTGGAACAAGAACTTTCGGAACTTTTGCATCAAAGTAATCAAACATTAGGGAACGATACAAATAGTTATGTGCCAATAATGGAAACATCGACCGGACATATTGAAGACCAAATAATGGAGAACAAGAGTCTGGTCAATATGGATGATGGTACGGTGACAATTATCAATGAAGAAGTCATTGTGCCACACAACGTGCCCATGAATACAGTGGAAGAGGCTTCTGAGACATCCAATGATGCCGCTTGTGATATGGAAGAAAGTGATATACAACAGATCCTAACGGAATTGGCTGAAGGTTCAATGGTTCTGGTTTCGACGTTGGATCCCAATAATCCGGACAAAGTGCTGAACGAAATATATATGCTGGACAAAAATACTGGGGAATTGTGTGATAAACCGCTGGATATACCCGATGCCATTGTTCAGTGTATTTTGACTGTGATGAGCTAG
- Protein Sequence
- MSMRRPRIKASANLMSSKRKPKTQVDKLTENDDERKKTDEIDNVLREDSTKASGALDAVQDANENEVINAPIETITTTSPVNGHMAGEKSESQVNGAIEKPTDNYEPDVDQSKDCDNGLDKSTNNALESSHDMVDYSLISNGNNIDDPASPIGVMSDLNNGVHEETNIESLSNNEKTEEKDSSFKCPPNVTFNRSNSYNAPVSVAGSDDVFHSDIEENVIQIDLQKSLNAQPMSPMSPSKTVSRQRIRATPIFGQRRNSFVGTSPSPHTGGDESGGEFTGSTHRRERHFSASLSQTSNSSSSHPYHHYTPHKYVPSMGRIRTESGCSAFSDSYAPSSKSRKTDDQHHRALSRRDFEARFNNGVVPDKSMLKMFDLIYYNPVTNPMEQKPNISAIKHESNPDDPKAQSEDIKPDADNLTDSSAIPVPQLKLNSNGELILDDKSLEIETTAEQEARKVLANSSLIFLDENTGMNGFYKKQKRTKEWPPEETIKFYRCLQTVGTDFSLMGQLFPNRTRRDLKLKFKKEERCNLALINKALLYPKIFNIDELKVQLETEEREREEAERRWKEIKAQEAKSLKKVHINASAGARVMALGNEIYQNENITKRKFSSRPKKAYVEAKNTNGYSEDNTLDEQPKKKRNRIQKKNNIIENDSSNGYNSEIKYETIKIENGHVDNQTRLVIDPNQLEQELSELLHQSNQTLGNDTNSYVPIMETSTGHIEDQIMENKSLVNMDDGTVTIINEEVIVPHNVPMNTVEEASETSNDAACDMEESDIQQILTELAEGSMVLVSTLDPNNPDKVLNEIYMLDKNTGELCDKPLDIPDAIVQCILTVMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -