Cfri002875.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- basR
- Assembly
- GCA_017309665.1
- Location
- CM029561.1:41861226-41862895[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.079 1.2e+02 3.1 0.2 10 44 219 259 218 261 0.78 2 5 1.4e-10 2.1e-07 31.2 0.0 1 38 267 305 267 312 0.94 3 5 3.4e-11 5.1e-08 33.1 0.0 2 43 322 367 321 369 0.90 4 5 1.4e-09 2.2e-06 27.9 0.0 3 46 378 422 376 422 0.92 5 5 0.092 1.4e+02 2.9 0.0 4 18 431 445 428 450 0.90
Sequence Information
- Coding Sequence
- ATGGAAACTCAAAACGAATGGGATGGTGATGAAGATTATTACGAAGAGTCGGACGAAGAAAACTCGAATAGCAATGATGACCTGAGTGAGAATAATGAAGCTACAAAGGATGGAGCTCCGACGGATGAGTTTTCAGAGGATCCTTCCAAATTATCCTTCATGCGAGAAATTGCTACGATACTGCAAAGTAACAGTGAGGCCAGCAGCTCCAATTGTCTTGTGCTGAATCGACATATGCAGGAGAAGCTTCTGTTTGTCCGAGACAAATTGGTACAACTCTTGGAATGCATAAAAAAACGCTATCGGGATAATGAGGAAAAATTGAAAGTAAGCATGCAGTTGAAATCACGAGGAGTCGGCATACGAGGTGCCTACTTAAAAGGCGGGACCTTCTATTTCAAGGGCAACATGTTCTTTAAAGACAACAACTGCAGAAATTGCCCCAACAATCCGGACTATATAAAACGTAGCGAAATCGAAAAGGAAATGTTTCCAATGGACTTCGAGTTGAGGGGCAGACACGTTTGGTCCCTCATGGATAAAGTCAGCATAGTGAAGGGTGTTAAGGAGCAGGTTATCGAGTATTTGGAACACCGGAATAACACGCAAATAACAAAGAAAAAAACGCTTCAACGGAATATATCTTTGCACACACAAAAACTAGCAAATCTATTGCAAAATGTTGGCGATGACTTTCAGATCGATTGGCATCAAATATGCATCTACAACCTAAGGCACCGACATACTGCATCCAGTTGCAAAGCATTATGGGATGTATACTTGAAGCCATCGTTGAATCGGAACCCTTGGAAAAGTGAGGAAAATTCGAAGTTATTAGAAGCAGCTACGCGATTTAATTTTGAGAACTGGGCATCGATTGCCTCGGAAGTAGGCAATCGCTCAGATTATCAATGCTTTGTGCAGTTTCATACTACTGTTTGCTTTATGACCAATACCAAGATGATGAAATGGACCAAGAGTGAGGATAGACGTCTGCTCGATACCATAAATAAATACACAATGAATGGGGTTATTAATTGGAATGCTGTTGCTTCTCGATTTCCAAATCGGAACAAAAACAAATGCATGTCACGATACTACTACAGCATTAATCCCAAATTAAGTCATGCACCTTTTACTCCTGAAGAAGACATAATCCTCTTGGCTGCGATCGAAGAATATGGCGAAAATTTCGGATGTATTCCACGAGCTCTCTTCCCAAATCGATCGTGTGTTCAGCTTCGTTGTCGCTTTCGGAATACGCTAATGCATCGCAATAAAAATAATGGATGGTCCTGCGAAGACGATAAAAAGTTGATGGATTTCGTTGCAGAAAGAAATGCAGAAAAGAGTTACAGAAGCTACGCCAAGGTCTTGGCGTGA
- Protein Sequence
- METQNEWDGDEDYYEESDEENSNSNDDLSENNEATKDGAPTDEFSEDPSKLSFMREIATILQSNSEASSSNCLVLNRHMQEKLLFVRDKLVQLLECIKKRYRDNEEKLKVSMQLKSRGVGIRGAYLKGGTFYFKGNMFFKDNNCRNCPNNPDYIKRSEIEKEMFPMDFELRGRHVWSLMDKVSIVKGVKEQVIEYLEHRNNTQITKKKTLQRNISLHTQKLANLLQNVGDDFQIDWHQICIYNLRHRHTASSCKALWDVYLKPSLNRNPWKSEENSKLLEAATRFNFENWASIASEVGNRSDYQCFVQFHTTVCFMTNTKMMKWTKSEDRRLLDTINKYTMNGVINWNAVASRFPNRNKNKCMSRYYYSINPKLSHAPFTPEEDIILLAAIEEYGENFGCIPRALFPNRSCVQLRCRFRNTLMHRNKNNGWSCEDDKKLMDFVAERNAEKSYRSYAKVLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -