Cfri001025.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_017309665.1
- Location
- CM029561.1:11815667-11882547[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-14 2e-10 40.5 0.0 1 45 346 391 346 391 0.95 2 2 8.5e-19 2.3e-15 56.3 0.0 1 43 855 898 855 900 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAATGTTCACATGCCAGGTGCCTTCAGGAACGTCGTCTCATCAAGCGGGAGCTAATGAAATGGTCAAAGGACATGCTGCACATTGTTGGCCTAGAGCGGGTCGCTGAGGAGTTGATGGGGCGCAGGAAATGGAAACATTACCAAGAAGCATTGACGCGAACCCATTTGAGTACCGAGCAATTGACGGCCGCCATCGATCAAGCGAGCGAACGAGATTCGAAGCTGGAGACCGACATCAAAGTGGATACACAACAACAACCACAAGAGAAACAACAACAACAACAACAAGAACAAGAACTGCTTCCACTGGAAGAAGCAGGAGCGAAAATTACGCAGCCACCTTACGAAGAAAACCACCGCCCAGTGGAGGGAGGCGACGACGACCGCAGCCGAGGGTCGCAGAGCAGACATCACAGCTCACCTCAACCTCGACCACAGGAGGCTCAGGACGACGACGTTGGCGTCGCCGCCGCCGTGCCCGTCGACTGGACGCCGAATGAGAAGTGTCATTTCTGCATCGACGGGAAACTGCTCACGGTGAACGCCAAGGGGGAACTGGTGGCCGAGTCGGGCCCGGCCGACCAGGCGGACCTCGCCCACGTCCACGCCCACGCCCACACTAACGCCCACATCAACGCGCACGCCTTTGGCCACGGCCACGGCCATCGGCAACTGATCGACACGGAGAGCGACTCGAACGACAGCTTCTCTGTCGCCAGGACGCCGTCGGTGACGTCGAACGCCGCCAACATCGCAGGCGCTGGAACCGCCGCAGCCGCCGCCGCGGTCGTCGCGAACACACAGCGAGCCAATGTGAACCACCTGCTGGGAGATCTGCCCGCGAACATGACCTCGATGGACTCGATGGCAGCGCACTTCGCTGCAATGCAGACCATTGCGGGACCCCTGTACCCAAATCTAAGTTCCAAGCCGTCGCCGAACTCCTCGATCAGCGGCGACCACAAGAGCTCGTCGACCAGGTCGTTGGCGTTGCGCGCCACCCCGGTGCCCTCGGGACGACGCGCCTACACCGATGGCGACCTCAAGAACGCCCTGCAGGACATCATTCTCGGCAAGCTGGGCACCCGCAAGGCGGCCGCACAGTACAACATCCCGCGCTCCACCCTCCGCAACAAGGTCTACAAGCTGACGATGGACTCGAAGCGCGAGGCGCCCGCGCCCGATCTCCTCCAGTTCCAGCTCCAGCAGGTGCTCGAGCTCGACAAGGACCTGTCGGGCGACGATGGCGACGACAGCAGCCACTCGACGCCGCAGCCGCAGCTGCAGCCGGAGGCGACGCCGCAGATGCCGCTCGACGATCTTGCCAGCCGCATCGCCATCGGGTCCGCTGCGAAGATGCGGAACAACGTCAACGTCAACAACGTCGAGGATGGCGATCACCACGCGAGCTCCTCGCCGAAGCCGCTGCTCACGACGGCGCTCACCGAGCAGCTGAAGCGCAAGCCGAGCAGCGTCGCTGCCCATCCGCAGCAGCAGGCGTCGCCGCAGCCGCAGCCACAGGCACAGCCGGCGATGCCGACGCTCGACCTGAGCATGCTGATGCACTCGCTGCTGCTCTCGCCAGCCCTGGCCGCGCCCCTCGGCGACCTGCTGCGCCTGATCCTGCTGAACTCGAAGGACGCCTCGGGGGCCGCCGCTGCCGCAACCGCCGGCACCTCGCCCGCCATCGGAGCCGGCGAGCCCATGAACAATGGGGGCGAGAAGACGGCGATGTTGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGGCCACGCCCTTCGCACACCGCCTACCAAAGTCTGACACGCCCGAGACCAGCTCGTCGCTGGAGCTGAACGAGGCCAGCGACGACCCGTCGGTCATTCTGAAGATTCCGTCCTTCAAGCCGTTGGCCGGCGGCACGAACGCCTCGGCGACGGCGCCACCGCCCGGCTGCGGCAGCGCGGCCGGCTCCCCCGCCCCCCTCGGCACGAACTCCAGCCGCAACGGCGACAGCCCGCTTCTGGCCGCGGCGGTCGCTGGCCCGACGGCCAACAGCCTCTCGGTGATCTCGCCGCCGCTGATGCGGCACGGCCTGGGCGGCGGCGAGTCGCTGCATGACGTCATCGCGAGCACGATCCACCGCGCCATGAACGACCAGTCGACGAAGGACGCGCACGCGGCGGCCGCCTCGATGCTCGGCCTCGGCAGCGGTGGCGGCGGCGCCTCCGGGGACGCCGGCAGCAACGGCAGCAGCAGCAACAACAGCAACAGCTACCGCAAGCCGAGCATCTCGGTGGTGAAGAACATCGGCGGCACGAACACCTCGTGCTTCGGATCGGCGAGCAACCTGCTCGACAGCGGGCACAACTCGCACCACGGCCACGCCCACAGCCATGGCCACGGTCACGGTCACGCCCACCAGCAGCAGCAGCAGCATCTGTCGCATCACGCGGCTCACCAGGCGCACCTCAGTCGCCAGGAGGCGCTGGCCGGCAAGGGGACGCGGCCGAAGCGCGGCAAGTACCGGAACTACGACCGCGACAGCCTCGTGGAGGCCGTCAAGGCGGTGCAGCGCGGCGAGATGTCCGTCCACCGGGCCGGCAGCTACTACGGCGTGCCCCACTCGACGCTCGAGTACAAGGTGAAGGAGCGCCACCTGATGCGGCCGCGGAAGCGCGAGCCGAAGCCGCAGCCGCTCGATGGCGCCGGCGCCGGGTCGGCCAAGGGTGGCGGCGGCGTCGACAAGCTGAAGGCGGCGGCGAACTCGGCGTCGAAGTCCGGCTCGCTAAAGAACAGCAGCAGCAACAGCAACAACAACAACAGCAACAGCCCGGCAGCGCAGTCGGCGGCCGCCTTCCCCACGACCTCACCGAACGGCATGAAACTCTCGATGTTCGACGCGGCGGCGGCGGCTGCGCAGCTGCAGTACGCGCCGCAGCTCTTCTGGCCGCAGTCGGCGGCGGCGTTCGGAACGCTGCCGATGGACTTCAATCGCAGCGCGTCGCAGGGCGGCAGCGGCGCCGGGGGCAGCGGGAACGCAGGCGGCAACAACGCGGTCGGCTCGCCGTACGTCAACCCCGAGATCCTGAAGTCGCACATCCAGCGCTACCAGGAGGAGTCGCGGCGGTCGCTGGGCGGCCACGCCCACTCGCACGCCCACTCGCACAAGAGCGCCCACAGCCCCAGTCCCGCCGCCAGCCCGATGCCGGGCCAGAACCACCACGCGGCGCTCGGCTTCAAGGGCGGCCGCGACTACGGCCAAAACGCCGACAGCAGCATGTTCGAGGCGGCGGCGGGCGGCGCCAACGGCTCGGTCTCGTCGTCGTCGTCCTCGCTGCTCGACGGCATCATCCGCAAGGGGCTCGACCGCAAGAGCAGCAGCAGCGACGCGACGCACCTCCACCACGGCCACGGCCACGCCCACACCCACCACCATCAGTCGCCCACGGGTGGCGGGGCCCTGCTCGACCAGCTGCTGGTGAAGAAGACGCCGCTGCCCTTCACGAACGCCGCATTCGCCCAGCAGCTGAAGCGTTCGGCCAGCCCGCTGCCGCCCTACGCCACCGTCGACATCAAGCGCGAGCGCAGCAGCCCCGTGCACAGCGACGACGGTGACGGTGACGCCTCGAACAGCGAGCTCGATGAACAGCAGCAGCATCAGCATCATCACCACGGTGAGCACAATAACAATAAGAACAACAACAATAGCATCACACTCGCCACCAGCGGCAACGGCGCCTCCTCCGCCTCCGCCGCCGCCCACCATGGGTTGGGGGGGCTCGGCCTGGGGCTCGCTGCCATGGGCGCGGCGGCAGAGCAGCAGCTGCGCAGCCGAATGACGTCACGCGACTCTGACACCGACACCGGCAGCTGCGAGAAACTCGGCCAGATCAAGGTGGAGCGCGAGAGCGAGGAGAACTTATAG
- Protein Sequence
- MAECSHARCLQERRLIKRELMKWSKDMLHIVGLERVAEELMGRRKWKHYQEALTRTHLSTEQLTAAIDQASERDSKLETDIKVDTQQQPQEKQQQQQQEQELLPLEEAGAKITQPPYEENHRPVEGGDDDRSRGSQSRHHSSPQPRPQEAQDDDVGVAAAVPVDWTPNEKCHFCIDGKLLTVNAKGELVAESGPADQADLAHVHAHAHTNAHINAHAFGHGHGHRQLIDTESDSNDSFSVARTPSVTSNAANIAGAGTAAAAAAVVANTQRANVNHLLGDLPANMTSMDSMAAHFAAMQTIAGPLYPNLSSKPSPNSSISGDHKSSSTRSLALRATPVPSGRRAYTDGDLKNALQDIILGKLGTRKAAAQYNIPRSTLRNKVYKLTMDSKREAPAPDLLQFQLQQVLELDKDLSGDDGDDSSHSTPQPQLQPEATPQMPLDDLASRIAIGSAAKMRNNVNVNNVEDGDHHASSSPKPLLTTALTEQLKRKPSSVAAHPQQQASPQPQPQAQPAMPTLDLSMLMHSLLLSPALAAPLGDLLRLILLNSKDASGAAAAATAGTSPAIGAGEPMNNGGEKTAMLAXXXXXXXXXXXXXXXXXXXXXXSATPFAHRLPKSDTPETSSSLELNEASDDPSVILKIPSFKPLAGGTNASATAPPPGCGSAAGSPAPLGTNSSRNGDSPLLAAAVAGPTANSLSVISPPLMRHGLGGGESLHDVIASTIHRAMNDQSTKDAHAAAASMLGLGSGGGGASGDAGSNGSSSNNSNSYRKPSISVVKNIGGTNTSCFGSASNLLDSGHNSHHGHAHSHGHGHGHAHQQQQQHLSHHAAHQAHLSRQEALAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGAGAGSAKGGGGVDKLKAAANSASKSGSLKNSSSNSNNNNSNSPAAQSAAAFPTTSPNGMKLSMFDAAAAAAQLQYAPQLFWPQSAAAFGTLPMDFNRSASQGGSGAGGSGNAGGNNAVGSPYVNPEILKSHIQRYQEESRRSLGGHAHSHAHSHKSAHSPSPAASPMPGQNHHAALGFKGGRDYGQNADSSMFEAAAGGANGSVSSSSSSLLDGIIRKGLDRKSSSSDATHLHHGHGHAHTHHHQSPTGGGALLDQLLVKKTPLPFTNAAFAQQLKRSASPLPPYATVDIKRERSSPVHSDDGDGDASNSELDEQQQHQHHHHGEHNNNKNNNNSITLATSGNGASSASAAAHHGLGGLGLGLAAMGAAAEQQLRSRMTSRDSDTDTGSCEKLGQIKVERESEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -