Basic Information

Gene Symbol
onecut
Assembly
GCA_017309665.1
Location
JAFDUT010000042.1:4798-8084[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-37 9.3e-34 115.5 0.4 2 78 677 753 676 754 0.97

Sequence Information

Coding Sequence
ATGAAAAACCTACGGGACTCAATAATCAAGATGAGCATGGAATCGATCAGCGAAATCATTGACCATCAGACACTGTCTGAGCAGCTAGTGGTAGACACCAGCGATCTAATTGTCGATGGGAGCGGCAGCGTTCTAGAGGCTCGCAGCCCAACGCCCACGACGGCTCTGTCGGCGCACGACGTAATTGTCGACGAAAGCAACGGACACCATGTGATAGCGACGGGCAGCAGTGGTTCAGTTGTCATGGTGCGCACGATTATCGACGGCATGGACCATAGTCCGGTCACAGTTTCAAATGGACACCACCAGCAGCAGCCATTGCACCACCATAACAACAACAATGGGAGCAGAAACAGCCAACATCATCAACTACAACATGACAATCAACGACTTAGCGCTAGCAGTCCCGTTGACTTCGTCAACTCTGATGTGCAGTTGGACGCCCTCTCAGCAGGATCCTCCGCAAGCTCCAACGCGCCGCATATGATCTCCGTAAAACAAGAGCATAAGTTGATCATACTCAACAACAACAACAGCAGTGGCATAGGAAGCGGTAGCAACAAGCTGGCTCGCAGTAACCTGAACTTGTCGACGGTGGGCGTCTTAGACGACCTGTCCTCGGATGCCATCGAAACCCTGTCGGTGATCGTGCATCCGCATGACGACTCTCGGGACTCCACGCAGATGCTCAGTCCCGATAACTCGCTGGAGACGAGCACCTACCAGACGCTGACATCTGTTAATGAGCGAATTTCGCCACCCGGTTTTAGTCCATCGTCCTCGTACGCGACGTTGACGCCTCTTCAGCCTCTGCCCCCCATATCGACTATGTCGGAGAAATTTGCCTACGGGGGTCATATCAGTGGAGGCGGAGGCGTCGGGGTTGGCAGTAACGGGTCCTCGTCTAGCGGCGGCGTCAACGGGTCTTTTGCCGTGATGCAGCACCAAAGCAACACTCTCGGCGGACTCAGTCTGAGTGGTCTCAGTGGCGTGCAGTCTCCGTACTCATCATACGACAAGCTGCCGACGATGAGTATGTCGATGTCGCCACCACCGCACACCTACGGAAGCTCGCCAGGGCACACGCTGTCTGGCATGGTCCCATCATGCATGTCTCAGGTGGCGTCGCCGATCCCCTGCAGCGCCCTCTCACCACAGTCCGCGTATAGCCACTCAACGGACCTTCACTCACCGCCCCTCAGCAGTAGCGTCGTCGTCGGCTCCATGAAAATCGATCGCGGCGGCTCGCTACAGCAACACCAACAGCAGCACTGTAGCCAGCACCACCACCAACACCATCAGAAGGTCGTCTGCTTGTCGCCATCACCGCTGATCGACGGCAGCGGCGTTGTTTCCGGTTACGAATCACCGTACGAGACTCATCAGCGCGACCTGATGGTCGCTACCACACCGACGTCATCTGTCTCTGGTGGACGCAACTCGCAACTACAGCACAGTCCGATACTAAGCCCTCATTCAGCGGCGTCGGCCGGCTCGATGTCTCTGCAATCGCCAGGTGGCGTCGTTAATCAGACCATTGTGACGTTGCCGCCAATCAACGGTCAGCTGGCGACGCTATCGGCGGCTTCTCTGGCATCGGTTTCTGCAGATATGATGTCTCCGGTAGAGGAACAAACAACGCTCACCAACGATGATGACGACGGTCTCGTGCAGATTGAAGACATTCAGAGGGATGCGACCGTGAACCCCCTGACACCCTCGCCGCCACCCCCTACGCTTCTGGCAATACACAACCCTCATCAACCACATCTGCTGATGCTGCAGCAGCAGTCGTCGTCTGTTTCGCGTACCTCCAGCCAACAGCAGCACCTCTCGGCGGCCGGAAGCGATGTTAGTTTGAGTGACAGTGGTCTGCTGATGTCGGCAGTGACCAGCGGGGGAGGGAACGCCGAAAGTAACTGCTCTAGCGGCAACAACAATAACATGACTATGTGCAATATTAACATTCAGCAGCAACAAACACATCAGGTCTCCACCACGAGCAGCGGAGGCAGCACAGGCGGTGACATGGAGGAGATTAATACAAAGGAGCTGGCACAGCGGATCTCTGCCGAGCTGAAGCGATACAGTATCCCGCAGGCTATCTTCGCTCAGCGCGTTCTCTGCCGCTCGCAGGGGACCCTTTCGGACCTATTGCGCAATCCAAAGCCCTGGTCGAAGCTCAAGTCGGGTCGTGAGACGTTTCGGCGCATGTTTAAGTGGCTGCAGGAACCGGAGTTCCAGCGTATGTCCGCGTTGCGTATGGCCGCTGCACAGATACCGCAGCGAGGTCCCAGCGGTGCTAGCGTGAGCAACGGTGGTGGCGGCAATGGAGGAGGCAACGTCAATGGGGGTGGCGTGGGCAGTAGTATCGATGGTGGAGGAAGCGGTTGCGGCTCGGTGGTAACCACCGCAGTGTGCAGACGCAAAGAAGAACCGCACATCGAGCATATGCCGCAGCCGAAGAAGCCGCGATTGGTGTTTACGGATCTACAGCGCCGTACGCTGCAGGCGATTTTCAAGGAAACAAAGCGGCCTTCGAAAGAGATGCAAGTAACAATCGCGCGTCAGCTTGGCCTCGAACCGACAACGGTGGGCAACTTCTTTATGAATGCACGCCGCCGCTCAATGGACAAATGGCGCGACGACGACTCCAAAAACAACATGACTGGCCACGACCATGACATGGACCTCGATCTCGGCCACGACGACTTTGAGCTTGACGGAGATCATGACGATGACAACGACAACGACGACATATTGTGA
Protein Sequence
MKNLRDSIIKMSMESISEIIDHQTLSEQLVVDTSDLIVDGSGSVLEARSPTPTTALSAHDVIVDESNGHHVIATGSSGSVVMVRTIIDGMDHSPVTVSNGHHQQQPLHHHNNNNGSRNSQHHQLQHDNQRLSASSPVDFVNSDVQLDALSAGSSASSNAPHMISVKQEHKLIILNNNNSSGIGSGSNKLARSNLNLSTVGVLDDLSSDAIETLSVIVHPHDDSRDSTQMLSPDNSLETSTYQTLTSVNERISPPGFSPSSSYATLTPLQPLPPISTMSEKFAYGGHISGGGGVGVGSNGSSSSGGVNGSFAVMQHQSNTLGGLSLSGLSGVQSPYSSYDKLPTMSMSMSPPPHTYGSSPGHTLSGMVPSCMSQVASPIPCSALSPQSAYSHSTDLHSPPLSSSVVVGSMKIDRGGSLQQHQQQHCSQHHHQHHQKVVCLSPSPLIDGSGVVSGYESPYETHQRDLMVATTPTSSVSGGRNSQLQHSPILSPHSAASAGSMSLQSPGGVVNQTIVTLPPINGQLATLSAASLASVSADMMSPVEEQTTLTNDDDDGLVQIEDIQRDATVNPLTPSPPPPTLLAIHNPHQPHLLMLQQQSSSVSRTSSQQQHLSAAGSDVSLSDSGLLMSAVTSGGGNAESNCSSGNNNNMTMCNINIQQQQTHQVSTTSSGGSTGGDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQIPQRGPSGASVSNGGGGNGGGNVNGGGVGSSIDGGGSGCGSVVTTAVCRRKEEPHIEHMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDSKNNMTGHDHDMDLDLGHDDFELDGDHDDDNDNDDIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00351770;
90% Identity
iTF_00351770;
80% Identity
iTF_00351770;