Basic Information

Insect: Coelopa frigida
Gene Symbol: JARID2
Assembly: GCA_017309665.1
Location: CM029563.1:19014435-19017093[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.1e-23 1.8e-19 70.1 0.0 6 89 75 156 70 156 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.1e-23	1.8e-19	70.1	0.0	6	89	75	156	70	156	0.92

Sequence Information

Coding Sequence: ATGGTAGAAGCACCCATATTTCGACCAACAGAAAAAGAATTTGCCGATCCGATTGATTTCATAGAACGGATCACACCCATAGCAGCAAGATTTGGTATTTGCAAAATTATACCACCAGCTGCTTTTAAGCCCGAGTGTCGAATCTCCGATGAGATGCGTTTCACAGCGTACAATCAGTACGTGCACAAAATGCTCCATCGATGGGGACCAAGTGCCAAAGAGCTCAGTGCAATTAAAAAGTATTTGGCTACGCAGAGTATTGTCATGAATCACCCACCATGGATAGGTGGCATGGAAGTCGATTTGCCACGTCTTTATCATACTGTACAGGAACTCGGAGGACTCAAAGAGGTAATTGAAAAGAAGAAATGGGCTCGTGTAGCGGAGGAAATGTGCATTCCAAAATTAGCACAGGATCGCGTCACAAAGCTTGATGACATTTACTGTAAATATTTACTACCATATGACACATTATCGCCGACTGAACGCCAAAAGTTATTCGACGAAGTCGAAGCTGATTGGGCGAAACGAGAAGCTCGTGCACGCCGAAATGCAGATCGATTTGTAAATACGGAGAGTGTGTCCAATGAAGAAGACGACGTTTCGTCAGATGATGACGAAGAGTCCGAAGAGGAGGTGGACGGCGTCTCTATGGAATGCATTGTTAAAGGACGTAGTATGCCTCTTAGTCAATTCTACCGTATCGCACGAAATACTATGACTTTGTGGTTCAAAAATACTGAACCTACGGTAAATGAAGTCGAGGCTGAATTTTGGCGACATGTAGCTGTACGAGATAGCCATGTGTGTGTACATTCTGGATCAATAGATTCGTCAGGTTGGGGCTATGGCTTTCCGTCACCTGGACCAAAGGGGAAAGGCTCGAATTATGCAAGACATCCGTGGAATCTGAAGGTGTTAACCAATAATCCGAGTTCTGTATTACGTTCCCTTGGACCAGTGATGGGTGTTACCGTTCCTACGCTGCACGTTGGAATGTTGTTTTCTGCATGCTGCTGGTATCGTGATCCACACGGGCTATCCTGGATTGAATACCTACATACGGGTGCCTCAAAGTTGTGGTATGGAATTCCGGACGATCAAAGTGCTAACTTTAGATCAGCGCTTACATCACTCATTCCCACACATTGTCAAAATAAGACAATTTGGTTGCCTTGCGATACAGTTATGGTTCCTCCTCATATGCTGACAGATCGAGGTGTCTCCCTGTGTCGAATAGAGCAAAAGCCCGGTGAATTTATTGTAGTCTTTCCACGCGCCTATACTTCTAGTTTAGCGACTGGATATGTGGTATCTGAAAGCGTATATTTCGCCACGAATTCCTGGTTGGATTTGGCAAAGGACGATTTCAGGGATATCCATGATAGCTGCGAACCAGCCATGTTTTCTCTGGAACAGTTACTCTTCGCTTTGGGGTCTGATCAACGCGTTTCCCCTGATACATTACAACAGATGTTGCCGATGTTAAACGAGGTTTACGAAAAGGAAACCGCTGCTCGGGAACAACTAAAAGCTGCTGGAGTTACGTCAACAGAAAAGGTGCCAAATGAGAAGGGCACTAAGTCGAAAAAACAACACCCTGTTAAGTCAATTGAAAGCGAATGCGATTTATGCAGAGCAAATTTATATATATCAATGGTGAAAACAGACGAAGGAAATGTATACTGTTTACAACATGCTCTGAAAAATTTAAACAATGGCAATATTCAAGCCAAACAGTGCAAATTAATCTTTGCATATAATGTAGAGGATATTGAAAATCTCATAAAAACTTTAAACGATAAAATTCAACAGAAGCGAACTACCGTTTCGAATAAGAAAAGCAAGTAG
Protein Sequence: MVEAPIFRPTEKEFADPIDFIERITPIAARFGICKIIPPAAFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPTERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSDDDEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMTLWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNPSSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATNSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGSDQRVSPDTLQQMLPMLNEVYEKETAAREQLKAAGVTSTEKVPNEKGTKSKKQHPVKSIESECDLCRANLYISMVKTDEGNVYCLQHALKNLNNGNIQAKQCKLIFAYNVEDIENLIKTLNDKIQQKRTTVSNKKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -