Cfri004159.1
Basic Information
- Insect
- Coelopa frigida
- Gene Symbol
- Arid4b
- Assembly
- GCA_017309665.1
- Location
- CM029561.1:13799147-13801244[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-29 5e-26 91.2 0.1 1 88 293 378 293 379 0.95
Sequence Information
- Coding Sequence
- ATGCAGCAAGTGGACGATCCGCCATCGCTACCTGTGGGTACGGAGGTGAGCGCCAAATATAAGGGAGCCTTCTGTGAGGCCAAAGTCAGCAAAGTGGTCCGCAATATAAAAGTTAAAGTCGCTTACAAACATAATTTGGGTTCAGGAATTGTTTCTGATGATGCTATTAAGTCGGGATTGCTACGCGTGGGTTCGGTGGTCGAAGTGAAGCATCCCGATCGCAAAGACACGGTCGAGGCAACAGTCACGAAAATACAGGATTGCTCACAGTACACGGTAGTGTTCGACGATGGTGATATCACCACACTGAGGCGCACAGCGCTGTGTCTGAAGAGTGGACGTCACTTCAATGAAAGCGAAACACTCGATCAGTTACCACTAACACATCCGGAGCACTTCGGTAATCCGGTGGTTGGAGGCCGACGTGGACGTCGACGTCATATCAATGAGGACAGCTCTGAAGAGGAAGATGAAAGTGACACTAAGGAAGTTGTCAACGAAAAAGAGGAACACATTGGCAAGGTCGTTTGCGTTGAGACTGAATCAAAAAAGAAAGACAAGGAAAAGTGGTTTCCAGGCTTAGTAGTATCTCCGAATGCTCAGGCGACGGTTCGCATACGTGTCAAAGACGAGTATCTGGTACGGTCTTTTAAAGATGGGCGATATTACACTGTGCCCAAAAAAGAAGCTACTGAATTTACACGAGAGGCGGCTGCCAAACAGGACGGCCCAGCTGTCCAAGCTGCCCTTGAATTTCTCGACAGTGATGTTTTACCACCCCATTGGGATCGCGATGCTCTCTTTGGGTTGAGTAACTCCTCGAGTGAAGACGATGGCGAAATGGATTCAGATTCATCTGATGATGAACCTCGTGAAGAAAAGGATCGCTTTGTTGCACAACTTTATAAGTACATGGACGACCGCGGCACTCCATTGAATAAAGTGCCATCAATTCAAAGTCGTGATGTGGACTTATATCGTCTGTTTCGCGCTGTGCAGAAACGAGGTGGATACAATCGTGTCACCGCCCAAAATCAATGGAAATCGATCGCAATTCGTTTAGGATTCACCCCAGTTACCATCAGTGTAACAAATCTCGTAAAACAGGCATATAAAAAATTCCTCCAACCATATGGCGAGTTTCATCGTAAACTAGGATGTTCCATGCTAATGACGCCACGTAACTCTAACCGTAGTAAGGGTCGAAGCTTGGTGCGAGCTAACTCAGTCGCTTCACCTAAACCGGCCGAGAATGTTAGTAAAGATATTAACAGCGCTGCCACTGTCAACGTAACACCGAAGGTGACTGTCTCGACTCAACCCAGTACCTCCACCGGAATAATAGCGGCAACTCTTGCACCATCGAGTGTCCTAACGATACAATCGGCTACAGAAGAATCTGAAAATACTAGTGAATCGAGTGTGGAAATATCGAAAAATAAACGAAAAACATCAGTTGGGAGCAATAAAGTTAAAGGATTAGTAGAAAAGTACGAGGAAAAATCCTCAATAAAAGATGAGGGTGATGTGCCATTGTCCAAAATAAAGGCTGCAGCAGCGTCTTCGCGAGTTGAAGAGAAAGAAACAACAGGATGGCTCTCCAACGGGTGA
- Protein Sequence
- MQQVDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKHNLGSGIVSDDAIKSGLLRVGSVVEVKHPDRKDTVEATVTKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRHINEDSSEEEDESDTKEVVNEKEEHIGKVVCVETESKKKDKEKWFPGLVVSPNAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREAAAKQDGPAVQAALEFLDSDVLPPHWDRDALFGLSNSSSEDDGEMDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAQNQWKSIAIRLGFTPVTISVTNLVKQAYKKFLQPYGEFHRKLGCSMLMTPRNSNRSKGRSLVRANSVASPKPAENVSKDINSAATVNVTPKVTVSTQPSTSTGIIAATLAPSSVLTIQSATEESENTSESSVEISKNKRKTSVGSNKVKGLVEKYEEKSSIKDEGDVPLSKIKAAAASSRVEEKETTGWLSNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01055007;
- 90% Identity
- -
- 80% Identity
- -