Csp013084.1
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- nfxl1
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000009.1:3600876-3604245[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 1.3e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 18 0.044 5.4e+02 1.2 1.9 4 10 160 166 159 166 0.97 3 18 1.8e-08 0.00022 21.6 16.0 1 19 174 191 174 191 0.99 4 18 2.3e-05 0.28 11.7 17.0 3 19 228 244 227 244 0.93 5 18 0.52 6.4e+03 -2.2 1.3 8 13 249 254 248 255 0.78 6 18 0.98 1.2e+04 -3.1 2.6 5 10 268 273 268 273 0.94 7 18 0.00025 3.1 8.3 8.8 3 19 281 298 279 298 0.92 8 18 6.1e-05 0.75 10.3 7.8 1 18 334 351 334 352 0.91 9 18 0.081 9.9e+02 0.3 12.1 1 12 386 397 386 398 0.95 10 18 1 1.2e+04 -3.2 1.0 6 10 406 410 405 410 0.90 11 18 1.2e-07 0.0014 19.0 14.8 1 19 416 434 416 434 0.93 12 18 2 2.4e+04 -4.2 0.8 6 10 463 467 463 467 0.95 13 18 0.00021 2.6 8.6 8.4 9 19 482 492 480 492 0.90 14 18 0.0039 48 4.6 5.6 1 12 502 512 502 512 0.95 15 18 0.31 3.8e+03 -1.5 3.5 14 18 543 547 543 548 0.87 16 18 7.8e-07 0.0095 16.4 4.9 1 12 584 595 584 599 0.93 17 18 0.008 97 3.6 16.8 3 19 622 638 613 638 0.88 18 18 7.2e-06 0.088 13.3 10.9 1 17 683 698 683 702 0.96
Sequence Information
- Coding Sequence
- ATGAGGAAATTCAAGCGAGCTCAGGCTCAGAATCAGGCGTCAATTGAGAGACATCTGAATGGTAAATCATTGGAATCATCGAGTGATGAAGAGAACGAGAGCTCCCACGAATCTCTTCAGCAGGCAGTTGCCAAAACATTGTCTTCGTATGAGTTTGAAGGTGGAGATACTGAGAAAACACTGTCCTATTTGACTGATTTATTCCAATCTGGTGGAGCTGTCTGCCTCATCTGCATATCTtcagtgaagaaaattgatccAATATGGAGCTGCTCAACATGTTACTCCTTCATGCATTTAATGTGCATTCAACATTGGATACGAGACAGTTTGAGCTATAAACACGAGAAAGGAATAACACCATTGTGGGCTTGCCCAAAATGTCGTACAGATTACCCCGAATCCTCCATCCCCACTTCCTACCTCTGTTTCTGTGGAAAAACTCTCAATCCCCCACCTCAGCCCTGGATAATTCCCCACTCCTGCGAAGAAAAATGCTCAAAACCCCTTCAACCTCCCTGTGGTCACAACTGCATGCTCCTATGCCACCCTGGCCCCTGCCCCCCCTGTCCCAAGATGATCTCAACCACTTGCTACTGTTCCAAACAACCCCCCCAGCCCCGCCGTTGTGCCCTAAAATCCTGGAGCTGCAGAACTCCCTGCAACAAAATCCTCCCCTGCACTCACCCTTGCAAATTCGAGTGTCACACTGGTCCCTGCCCTCCCTGCCCTAAAATAATTCCCTCCCCCTGCCACTGTGGTGCCTCCACAAAGTCCCTGGAATGTTCCAAAAAATCctggaaatgtcaaaaaaaatgcacaaatCTCCTAAACTGCAAAATCCACATATGCGAGGGTTTATGTCATGCTCCTGGTGACTGTTTCTCCTGTCCAATATCCCAAAATCGTACCTGTCCATGTGGAAAAAAACGGTACAACGTATCCTGCAAGCAAAAAATCCTTCCCACATGTGGTGACACATGTTCAAAACTCTTAAACTGCAACACTCACTTCTGCAACATGAGATGTCATCTAGGAGATTGTGGACAATGTCTCGAAGTTGTCAATAAAACCTGCAAATGTGGATCTTACACCAAAGAAATATCCTGCACCAAAGATTTTCACTGCAACAAAAAATGCACCAATATGAGGGCATGTGGCAAGCATCCCTGCAACAAAAAATGCTGTGATTGCTCTAAAACTGGTATCAATCCTTGTGAGAAGATTTGCGAGACTTCGTTGAATTGTAGGAAGCACAAATGCACAGCTCCCTGTCACTCTGGTCCGTGCTACCCGTGCCCGAGGACCATCACTTATCAGTGCAGGTGTGGTAATAGTAAAATCGAGGTGCCATGTGGAACCAAGAAGAGGATTAAACCTCCACATTGTAATAAATTGTGCAAATTACCACCAATTTGTCATCATCCTAAGCAGGAGAGTCACAAGTGTCATCAGGGCAGTTGTCCACCTTGCAAGAAAATTTGTGGGATGATTTATAAGAAGTGTGGACATGATTGTGTAGCTGTTTGTCATACCAAAGTTTGGgTAAAGGTGAGGATCAATGGGGTTGCACAACCTGCAGGTCCTTGGGAGATTTCCAAGGACAAGATGGAGCTGAAGACACTGGATTGCCCACCTTGTGAGGTGTCTGTTATGGTGACTTGTCTTGGGGGACATGAGACGAGACCTTGGAGTTGTCACTCTGCTGTTCCTAGCTCTTGTGAGAGAGAATGTGGGAGATTACTGGCATGTGGAAATCATAGATGTGAGGTAGTTTGTCATAGGGTTAAGGGCGAGGGAGAGGATGGAGAGGAGTGCATGGAGTGTGAGGAGGCTTGTGGGTTGGAGAGACCTGAGGGATGCACTCATTTGTGCAGCAAGGGTTGTCATCCTGCACCTTGTCCACCTTGTAAGCAGCCTGTTAAAGTTTCTTGCCATTGTGGATTGAACGGACTGTATAAGAGGTGTGTTGAGATCACTGGGAGCACGGTAAAGGAGAGGGAGGAGATGCTGAAATGTGGGAATCAGTGTCCACGGATTTACTCATGTGGACACCGATGCATAGACAATTGTCATCCGGGCAGCTGTCGTCCATCAGATGTCTGTAATAAACGTGTAAAAGTCACTTGCAAATGtcaaagaattaaaaaaacagTTTTATGCACAGAAGTGCAAAAAGGAAAAGTGAAGATTGAATGTGATGACCAATGCCAAGAACTGAAGCAACAGAGAGAGCGTGCACAAGAGGTGGAATTAGCTAAAAAGAAGAAGGAAGAGGAGTTGAAAAACCAGAGAGAAGTGGAGAAATTCGAGAGGAAATTCAAGCCACGAAGAAAAGGAAGAGATAAAACTGAAAATACTAATGATTCAGGGAAAAACAATCATTTATACATCATGCGAGCTGTATATTTCGCTTGTGTATGTATTATCATTGCCATTGTCACGTTTTATATGACCGAGAGAATGTAA
- Protein Sequence
- MRKFKRAQAQNQASIERHLNGKSLESSSDEENESSHESLQQAVAKTLSSYEFEGGDTEKTLSYLTDLFQSGGAVCLICISSVKKIDPIWSCSTCYSFMHLMCIQHWIRDSLSYKHEKGITPLWACPKCRTDYPESSIPTSYLCFCGKTLNPPPQPWIIPHSCEEKCSKPLQPPCGHNCMLLCHPGPCPPCPKMISTTCYCSKQPPQPRRCALKSWSCRTPCNKILPCTHPCKFECHTGPCPPCPKIIPSPCHCGASTKSLECSKKSWKCQKKCTNLLNCKIHICEGLCHAPGDCFSCPISQNRTCPCGKKRYNVSCKQKILPTCGDTCSKLLNCNTHFCNMRCHLGDCGQCLEVVNKTCKCGSYTKEISCTKDFHCNKKCTNMRACGKHPCNKKCCDCSKTGINPCEKICETSLNCRKHKCTAPCHSGPCYPCPRTITYQCRCGNSKIEVPCGTKKRIKPPHCNKLCKLPPICHHPKQESHKCHQGSCPPCKKICGMIYKKCGHDCVAVCHTKVWVKVRINGVAQPAGPWEISKDKMELKTLDCPPCEVSVMVTCLGGHETRPWSCHSAVPSSCERECGRLLACGNHRCEVVCHRVKGEGEDGEECMECEEACGLERPEGCTHLCSKGCHPAPCPPCKQPVKVSCHCGLNGLYKRCVEITGSTVKEREEMLKCGNQCPRIYSCGHRCIDNCHPGSCRPSDVCNKRVKVTCKCQRIKKTVLCTEVQKGKVKIECDDQCQELKQQRERAQEVELAKKKKEEELKNQREVEKFERKFKPRRKGRDKTENTNDSGKNNHLYIMRAVYFACVCIIIAIVTFYMTERM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439148;
- 90% Identity
- -
- 80% Identity
- -