Csp000286.1
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- pnr
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000001.1:1649037-1652121[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.91 2.5e+03 -1.4 0.0 7 18 66 77 66 80 0.84 2 3 4.5e-18 1.2e-14 54.0 3.2 1 34 160 192 160 194 0.97 3 3 6.8e-19 1.9e-15 56.6 6.2 1 35 219 252 219 253 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGCAGTGGAAGTGGTGGGTACGGAGCGGGCACCGATTATCAGACACAACAGTcccagcagcagcagcaacagcagcaCAATCAGCAACTTCAAGCCCCTGTTTATGTGCCGTCCTCCAGGCCGGCTATTCCAGCAGCAGCCACGGCACAGTATCACTCGTTTCCTGGTTCTGCTTCACCCGCATGggaTAAAACAGCATCCTGGCAACATGGAGTCGACGGTTATACGCATCACGCCCTCGCCGGTCACACGGGTAGTTCTCCAGGAGGGATGGGAGCCCACAGTGCCCACGGACATCCCCACCCATCCCACCCCCACACAGGCCACCCTCACGCAACCCTCGCGAGTCCATTTTACGCCCAAAACGTTGCGATGATGTCCTCAAGATGGCCATACGACTCTGCCGGTTTCCAACGTGCCTCACCGTACGATACGGCGATGGATTTTCAGTTTGCCGAGGGCCGAGAGTGCGTTAATTGCGGGGCCATTTCCACTCCACTTTGGAGAAGAGACGGAACTGGGCACTACTTGTGCAATGCCTGTGGCCTCTATCACAAGATGAACGGGATGAACAGGCCGCTGATCAAACCATCCAAACGCCTCATCTCCGAATTCCAGACGGCGACGAGACGACTTGGACTGTGCTGTACCAATTGCGGGACCAGGACAACGACACTGTGGAGGCGTAACAATGAGGGAGAGCCGGTCTGCAATGCCTGTGGTCTTTATTTCAAATTGCACGGTGTAAATCGTCCATTGGCAATGCGAAAGGATGGCATACAGACGCGCAAAAGAAAGCCCAAGAAAACACCTGAACCAAATCCACCAAGATCAACTGTAAATGATCATGAGACGTCGACATCGACTACTTCATCTCCATCGAATgACTTGAAAAGTAGTCAACAACAGCCTCAGCATCACCAGATTGAATCAACAAAATCCTCATCATCAGTATCAACAGACCGACCAGTCTACCTCGGTCACACATCACTTCTAGCAACTGGCGGAGTACCATCAGTGAAAACAGAGCCAAGAAGTTGCGACGGAATAGTTGGACAGCCATACTCATCGTACTACCAACATCCTCATCAACTTGACCCACCAACGAGTGAGCATCAGCAGCAGAATTATTACCAAACTCAAGAGACACCATATCATCATCAGCATCACGTGGCAACAGCCGCCAAACTTCTCGCATCATCttag
- Protein Sequence
- MFHGSGSGGYGAGTDYQTQQSQQQQQQQHNQQLQAPVYVPSSRPAIPAAATAQYHSFPGSASPAWDKTASWQHGVDGYTHHALAGHTGSSPGGMGAHSAHGHPHPSHPHTGHPHATLASPFYAQNVAMMSSRWPYDSAGFQRASPYDTAMDFQFAEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNPPRSTVNDHETSTSTTSSPSNDLKSSQQQPQHHQIESTKSSSSVSTDRPVYLGHTSLLATGGVPSVKTEPRSCDGIVGQPYSSYYQHPHQLDPPTSEHQQQNYYQTQETPYHHQHHVATAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01005682;
- 90% Identity
- iTF_00168881;
- 80% Identity
- -