Csp015798.2
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- -
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000012.1:4560401-4565800[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.039 4.3 8.4 1.5 2 21 455 474 454 475 0.92 2 13 0.007 0.77 10.8 0.7 3 23 508 528 506 528 0.96 3 13 0.063 6.9 7.8 0.9 2 22 617 637 616 637 0.94 4 13 0.11 12 7.0 0.8 3 23 655 675 653 675 0.96 5 13 0.0057 0.62 11.1 0.8 1 21 749 769 749 770 0.96 6 13 0.76 84 4.4 0.0 2 13 908 919 907 922 0.89 7 13 0.0025 0.27 12.2 0.1 1 23 948 970 948 970 0.97 8 13 1.9 2.1e+02 3.1 0.1 1 20 975 994 975 996 0.90 9 13 0.034 3.7 8.6 0.2 2 20 1014 1032 1014 1036 0.89 10 13 3.7 4.1e+02 2.2 0.2 1 12 1557 1568 1557 1580 0.74 11 13 0.016 1.7 9.7 1.3 1 23 1703 1727 1703 1727 0.97 12 13 0.012 1.3 10.1 0.2 1 23 1737 1762 1737 1762 0.97 13 13 0.067 7.3 7.7 1.5 1 19 1764 1782 1764 1786 0.93
Sequence Information
- Coding Sequence
- ATGGATAAGGAAAATTTAGTTGAAAAGTGTCGTCGTGTCTCAGTGGTACTAACACCTCTCAAGAATTCCGAAATAAACAAATGGAGAAACCAAAGAAAATCCACTGAgaaattgaggagaaatcGTTGGAAAAAGGGTATTTTTAAACAACGACCAAAAAAACCTCAAGGACGTAAATGCTCAGTATCGTCGTCGAATGTCGATGAAAATTGCAGTGAAATTTCTAAAAGTGGGAAACGAACAACAGATAACACAACATGTGGCATTACTGACAATGAACCAGTACTGGTTGAGCATCAGAAGAGAATGAGGACTGCTGATACTAGAGATTCAGATCCTTCGATTGAGAGTAATGAGAGTTTTCCACTTTGGAAATACAAGAGAAAACGAATAACGAGTGTTTGTTCGAGTCTCAGTGATGATGAACCATCAGCCAAAAGAGTTGAAATGAACTCAAGTGATATGAATCTCAGTGGTAAAGAGTTGCACATTAATTTAGAAAGACTGACAGCAGTGGATGAATCCTGTgcagatattcaattgaatgatgTTGCAGATGGAAGTGAAGTAGAACGAGATATTAATGAAGATACAGCAAGTTTGATAATGGATAGCTGTGGCAGCAGTCATGATACAATTGGTGTTGATGAGGGATCTAATAAAGAAATGACACCTATTAGCCAGGAATCTCAAGAGTCTGATGAAACTGATGATTTTAGTCAATTGAAGGACACAGAGAGTTTTGTTAGTTCTGATAgtcattataataatattaatggtGCACCATCAGACGAGGAGAATGAATCAGAGGCTGACAATGACGAAGAGCTGACTGATTTGTGCCTGATGAAGGAGCCAACAGTGTTGGTGACAAAGCTAGAGGATATGATAAATTGTCTGGAGGATAATCGTACGTTTCCAGACTTCAAACACTTGTCGAGAGAGCATATCAATATTATCCTCAACTTCAGACACTTTGCTGATACTTCTGATGATACATCGTACTGCCTTGTAATGTCTCCTGATACAGAATCCATGTCAAGTGATACTGATGAGACACTTGCTATCAATAATTCTCATGCTCATCGAATAAGAAATAGAAGAAGAATATCGAGTGATGGAAGCTGTTGTTCTGATATTGAGCCATCACCAGCTGTACCTGAAGATTCACAAGTACCTGGGGATTCTGAAACTGCTGTAGAAGAACCAGCAGTACCTCCCTCTGAGGATGATCAAGCATTAAGTGAAGTGCCAAGTCCAACCAAAAGTTTGAATTCGTCTTCTTGCAGTACAATTAATGCTGCTAATGAACCTGATAACTCCTCCCACTCTGAAGAGGCAGCAGTATCTACCAGTCCATTATCATGCCCAAAATGTCAAGAATCATTTAAAACAACAGATGATAAATCAAATCACCAGTGTGCTCCAAAATCAAAACAAGTTAAGCTCTCAAAGTCTGGAAATAAAGgattgaaacagaaaaaacaTGCTAAAATGACACCCAAATCAACGAGTACAAATTGCACTGTATGCtcagaaaaatttgataattatgaaCAACTGTCAGATCATATATTCAAGCATACACCCAAAGAACTACAAGAGGCATACATTGCTGCAGCTCGTGATCTTGGAGACTCTCAACCTCAATTGGGAATAGACTCAGATCCAGACGATTGTGTAGAAATACCAAGAGccgaaaaatcaaatttaggAGTGgcaataatgaatgaaaagtcACCAAAAggtaaagtgaaaaaaaaaaatgcattacCAGTTGCTATATGCCCCTGTCACACAGATTCTCTAGAGCCAACAGACCTCACTGTGCAAATTGAAATGGTACTTTATTGTGAAGTATGTAAAGTTTTATTTCGACGAAGTGAGTGTCTCGAGATGCATTATAGATCAAATGCTGAGTGTAATAAAAACAGGGGAAAGGGTAGATCGCCGCATCTATTCTGCAGCACCTGCAGAGTTGTCCTAAACACTCTGTCTGATATGCGAAAACATCTCGAGAAACATGTGAGTATAAATCGTCATGGTACAGTGACATTTGTATGCAACATATGTCGTGTTGTTTTCTTTGGTGTTGGCACTGTATTCTGTACCCACTGGTTCAATCATGAGAAGGATCCAATGTTTGTGGCAAGTAGATACTCATTTCCAAAATTATGTGTATCACATCGTGGAAAAAGTCCACTTGGTAAACAACCTGGTGAGCAGTATTTCTTTGTTGCTGAGTATGTTTGTCGATTTTGTAAgcaacaattttcatcagaCAGTGATTTGTCGAATCATATCAAGCAGGAGTGCAAGGGGGTTGAGTTTAAACAACCAGATGAGTCTGAAGATGCTTCACAAGCATCAGTAAGACATAAAAGAGCTGTAAAGAAGGTTTCAGTCAATTCATTGCCAGCGTCACAAACTACTGGTGAAGAAATTGCTCAGAGAACTGGACCGAGACCTGTGGGACGTCCTAGAAAATCGTGGACAATATCATTAATAACACCATCAGTGGAATCACCATCTAAGCCACCACCACAGTCACTAATCAAGACACCAACGCAGTCACTAACGGAGCCATCACCGAAAACAACAACGAAGCCATTAATAACACCAGCAACaaaaccaccaccaccacctcaaCCACCCCTCAAAATCCCCATCCTATCTCAAACTTCAGAGGCTGATACATCCAGTTTATACGTAAAAACATGGGTTTGTGATATCTGTGAAAAGGCTTTTCCAACAAGAAAAATTCTCGTCGAAAAACATGCAGTTAATCATTTTGATGCTGCTGTTGCTCTCGAAAGATTTAACAGCACAGTGGAGAGACCCTATGCCTGTACAATATGTAGAAAAGCTTATGgctcactcgatgcactcagTAGTCACTGGCAAAAACATGACTTGATGAAATATCTATGTTCAGCTTGTAATGAAACTTATTACAGTCTCCAAGCATTCAGCAAACACGTTATTGTCTTGTGTAGAAAGCACAATCCAGTGTGTAGAGTATCATTTGGCACCAAAGGTACCTGCAAACTATGCAAAATTGCATTCAAAGAACTCGATGATTTAATAAAACACAATATTGATTATCATGGTGCTGGTAGAATTGTGGGAACTCGATTGgaaatgaattcatcaaaaaattcaaaaaaaaaagctgtTTCAAAAGCTCCGGCAACTGTCGGTAGTCAAAATTCTATACCTACAACACCAACAAAGAATCCTACTGTAGTGCCAGTTATTGTAGCTCGTCAATACTCTCCAATTGCTCCAAAAACACCAGTTACACCACCAGCAGCACAAATTCTCTCACCACGTAATTCCCAGGATTCACCAATTGTTCTCTGTGTTCAGTCACCAAGTGCCAACGAATTGATGTCAACTAATCAACAAATAAATGGTCCATTAGTAATTAATATTGCAATTCCAAATATCGTTCAATCACCAACCAATCTACCAGATCCAACATCAAAGGATCTTTCACCACCAAAAGTGAGAGCTTTGGAAGATCCAACTGTTCAAGTTGTTCTGACACAGTCAAATTCATCAGACTCGACAATTTCTGCATCTCTGGTGACTGATGTATCACCAATCAAGACTATGACATCATCTAGGGGACAAAATTCGTCTACTTATGCTTTAACAGTTAGAGATACAACAGCCTCTGGTGGATCTATCACTCAAACAGACTTGGCTCAGGAAGAAACAATTGCAAATTCTCTCCTCCAAAATACACCATCGATTGAAGAGACTGCAACTGCAGAACAAGACGCAACTCCagataatcaaaataattctccACCAGAAGATAGAGTTAacaatgagaataataatcTCGGAGTTGATTATTTGCCTGATAATGCCACCACAAGCAACAGTGACGACATACAAATCCTCGATTTTACGGAAAAAACTAGAGAAAAATCTGTTGAAAAGACTTCACCAAGAAAATCCTCCAGGGTTgtagcagcagcagcagcagcagtaGACAGTGATATTGAGATACTTTCTGAGACATCGGCAcaagaagaaagagaaaaaactaGTCCTGAGGATGAAACTCTGGTAGAAAAAAACGTAGAAGAAGAATCAGAAAAAACTGATGCTGTAGACGAGTCCTCAGAGGGTAGTAGTGAAGTGACTCTGGTTAAAAATCCCCTGTCAAAACCTCAGGGATTTCTACGTGTGAAAAACTTGTCTGAACTGCaggatgagaataaaaatgtcaacaaCACTCAAGTGAATAATAAAACAGGTAATACGTTGACTGAGCATTTAATGGCCCACTTGAAGCCATCAAAGAGTCCTACAAAACAGCAGTGCCCATCCACTTTATCTAATGGAATAAATTCAGGTGAAAGTACAGCGTCAGGGAGTGCATTAGCACCAGGAAAGAGAATTCTCCCAAAAATACCACAGAGAGTCCAAGGAAATGATGCAAGACGTGCTAGTCCTCTTATATCTCGTCAGGATCAGAATTCAGGATTGAAACCCATGAACAGAGTAACACCAATATCAACAACTAATGCTGGAATTAGTGTAAATGCCCATTGCAGTAGAACTATGAATCCTCAGTATTTATTACCTACAAATATTGAAGAGAGACTCATAAATCCAATGAGCAATGTTCAAACTATTAATGCACAAAATGCATACGTATGTCCAATTTGTCCATCAAGTTATCACACGACAGCTAATGATTTTCTTTCTCACCTGGCTCAACATCCCAATTTACCTTCCAATGTTCAAGCTGTTGTGTATGgtttaatgaatgaaaaatttccttcATCCAATCAAGTACAACAACCTCGACAATtacaaaatcaacaaaaatacaAGTGTTTATTGTGTCCAAATTACGAGACTGATTCATCCACAGATTTtcataaacattttttgaCACATGCACAACACAGAATCACTACTTCAATTCAATCACCCCTCATGTGTTATACTCCACAAATTGGTGGAACACTTGTACCAACATCAATGAATCCCATGTATTCAAGACAATATCAGTATCAAGAACAGAGTCATTTGTCTCAGGgaagaaattcatcaaattctgGAATTTCTGTTCGTCCACAATTGTACAGATGCAGTTTGTGTTCGAATTATCAGTTTAGAACGTATGCAGAGCTTGAGAGACATGTTAAAACAATGCATGGTAATATTTTAAATGTTTCTGATCGTTTTGTTTGCTCTCTTTGTCCAAATCTCAAGGTATTTGTTGATGAGAGAACTCTAAAGGAGCATGAAAGGACACAGCACACATTTGTTTGTAGTATttgtcttcaaaaattttctaatgcGTATGAGCTCGATACTCACTGTGATCTTCATAAAAATGGACAACTTGGAAATCCTTATTCTaataatagataa
- Protein Sequence
- MDKENLVEKCRRVSVVLTPLKNSEINKWRNQRKSTEKLRRNRWKKGIFKQRPKKPQGRKCSVSSSNVDENCSEISKSGKRTTDNTTCGITDNEPVLVEHQKRMRTADTRDSDPSIESNESFPLWKYKRKRITSVCSSLSDDEPSAKRVEMNSSDMNLSGKELHINLERLTAVDESCADIQLNDVADGSEVERDINEDTASLIMDSCGSSHDTIGVDEGSNKEMTPISQESQESDETDDFSQLKDTESFVSSDSHYNNINGAPSDEENESEADNDEELTDLCLMKEPTVLVTKLEDMINCLEDNRTFPDFKHLSREHINIILNFRHFADTSDDTSYCLVMSPDTESMSSDTDETLAINNSHAHRIRNRRRISSDGSCCSDIEPSPAVPEDSQVPGDSETAVEEPAVPPSEDDQALSEVPSPTKSLNSSSCSTINAANEPDNSSHSEEAAVSTSPLSCPKCQESFKTTDDKSNHQCAPKSKQVKLSKSGNKGLKQKKHAKMTPKSTSTNCTVCSEKFDNYEQLSDHIFKHTPKELQEAYIAAARDLGDSQPQLGIDSDPDDCVEIPRAEKSNLGVAIMNEKSPKGKVKKKNALPVAICPCHTDSLEPTDLTVQIEMVLYCEVCKVLFRRSECLEMHYRSNAECNKNRGKGRSPHLFCSTCRVVLNTLSDMRKHLEKHVSINRHGTVTFVCNICRVVFFGVGTVFCTHWFNHEKDPMFVASRYSFPKLCVSHRGKSPLGKQPGEQYFFVAEYVCRFCKQQFSSDSDLSNHIKQECKGVEFKQPDESEDASQASVRHKRAVKKVSVNSLPASQTTGEEIAQRTGPRPVGRPRKSWTISLITPSVESPSKPPPQSLIKTPTQSLTEPSPKTTTKPLITPATKPPPPPQPPLKIPILSQTSEADTSSLYVKTWVCDICEKAFPTRKILVEKHAVNHFDAAVALERFNSTVERPYACTICRKAYGSLDALSSHWQKHDLMKYLCSACNETYYSLQAFSKHVIVLCRKHNPVCRVSFGTKGTCKLCKIAFKELDDLIKHNIDYHGAGRIVGTRLEMNSSKNSKKKAVSKAPATVGSQNSIPTTPTKNPTVVPVIVARQYSPIAPKTPVTPPAAQILSPRNSQDSPIVLCVQSPSANELMSTNQQINGPLVINIAIPNIVQSPTNLPDPTSKDLSPPKVRALEDPTVQVVLTQSNSSDSTISASLVTDVSPIKTMTSSRGQNSSTYALTVRDTTASGGSITQTDLAQEETIANSLLQNTPSIEETATAEQDATPDNQNNSPPEDRVNNENNNLGVDYLPDNATTSNSDDIQILDFTEKTREKSVEKTSPRKSSRVVAAAAAAVDSDIEILSETSAQEEREKTSPEDETLVEKNVEEESEKTDAVDESSEGSSEVTLVKNPLSKPQGFLRVKNLSELQDENKNVNNTQVNNKTGNTLTEHLMAHLKPSKSPTKQQCPSTLSNGINSGESTASGSALAPGKRILPKIPQRVQGNDARRASPLISRQDQNSGLKPMNRVTPISTTNAGISVNAHCSRTMNPQYLLPTNIEERLINPMSNVQTINAQNAYVCPICPSSYHTTANDFLSHLAQHPNLPSNVQAVVYGLMNEKFPSSNQVQQPRQLQNQQKYKCLLCPNYETDSSTDFHKHFLTHAQHRITTSIQSPLMCYTPQIGGTLVPTSMNPMYSRQYQYQEQSHLSQGRNSSNSGISVRPQLYRCSLCSNYQFRTYAELERHVKTMHGNILNVSDRFVCSLCPNLKVFVDERTLKEHERTQHTFVCSICLQKFSNAYELDTHCDLHKNGQLGNPYSNNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -