Csp003295.2
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- -
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000001.1:21593369-21598493[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0067 0.73 10.8 0.7 1 21 167 187 167 188 0.96 2 20 0.028 3.1 8.9 1.2 2 23 199 221 198 221 0.96 3 20 0.00031 0.034 15.0 3.7 1 23 231 254 231 254 0.93 4 20 0.72 78 4.4 0.2 5 20 539 554 538 555 0.92 5 20 0.27 30 5.8 2.2 2 23 565 586 564 586 0.96 6 20 1.9 2.1e+02 3.1 1.4 1 19 613 631 613 632 0.78 7 20 0.36 40 5.4 0.1 1 21 717 737 717 738 0.91 8 20 0.00013 0.014 16.2 0.8 2 23 746 768 745 768 0.96 9 20 0.0049 0.53 11.3 0.5 2 23 778 800 777 800 0.94 10 20 2.5 2.8e+02 2.7 0.4 2 19 822 839 821 839 0.90 11 20 2 2.2e+02 3.1 0.6 1 10 849 858 849 861 0.96 12 20 0.0063 0.69 10.9 6.1 1 23 883 906 883 906 0.93 13 20 0.0016 0.17 12.8 0.8 1 23 927 949 927 949 0.97 14 20 0.85 93 4.2 0.1 2 23 990 1012 989 1012 0.90 15 20 0.006 0.66 11.0 0.7 1 23 1083 1105 1083 1105 0.97 16 20 0.014 1.6 9.8 1.5 1 21 1215 1235 1215 1236 0.95 17 20 0.025 2.7 9.0 2.3 1 23 1243 1265 1243 1266 0.95 18 20 0.081 8.8 7.4 1.0 1 20 1276 1295 1276 1299 0.85 19 20 2.5 2.8e+02 2.7 0.4 2 23 1417 1439 1416 1439 0.90 20 20 0.00098 0.11 13.5 0.9 1 23 1485 1508 1485 1508 0.97
Sequence Information
- Coding Sequence
- ATGGCACGTGCCATGATCTACAGAGGCTCGTCGAGCCTTATCGCTGTGGATGCACCGAGTGACGAGGTGGACCCTCTGGAGCTCCCAATAAAGAATGAGCCAAGTAGCCCAATGCTGGAGAGCCTCCTAGATTTTCCTCAACCTCCATATGATTTGCCAGAGTCTACGGGTGTCGCTGAGGTGCCTGTACCATCATCGATAGAGCAATCTGATGATCCCCTTGAACCACCTCCAGCCCCTCCAGCCAACGATGgtgacgacgacgacgacgacgacgacgacgacgacaaGGACTCATCCTCACCGGCAAGTTCTAGCGTACATTCTACACAATTACCCAACCCTCAGCCAACAGTCTCTGTTAATCTCAACAACAGTATCAATAATCCTAAACGACAATCTTTCCAATGTTCCCAACAATTGAGTCAATTTGTTATCGATAATTGTAataaactcaaagagaatagACTTCGTACTAGATCAAATGCATCAAATAACTACGAGTGTGATATTTGCTTCAGCCAATTTAATCATCGAGCTGGTTTAAAAATACACATGAAATATTATGGTACCTCAAAGAAACACAAGCATCTTGTGTGTCACGTTTGTAGAAAAAGCGTAATGACACCACTACAATTACTGTCCCACAGAAAATCCTCACATCGTCATATTGTCTGGCAAGAATCAGCATACAAGTGTGACCATTGTCCCCTAACATTCGCCACTAAAGGCTCCTTGCAGATGCATTTATTTCACTATCATGATAttggaaataatgataaattgcAGAAACGTAGAGTAAGAGAGAGCAGTAGTTCAGTGGTATTGCCAGtagttgaaaatattcaaagtgAGTCATCCAGATGTAAGAGGAAGCGCAGAAGAGATCAATTGGCTGAAGAGAGGGCTCACAGTgtcttaaaaaataaaaaatcattttccaaAATAACCAATCGGCCAGGACCCAAATTCTCAAAATCCCAATTATCGATCCATCATTCATCTAAAGCCCAAAATTCCACCAGCAATGATACACCATTTGTTAAAATTCACGCTGTACCTCAAGAAGTTGAAGCTCTTTTAAGTGATCACGATGATAGTCCCATGATGAagcgaaaaaaatttcttcattatcaaaaattacaagaaaatatcgatttaaaGTATTTGAGATCTGGTAAAATAGTAAAGAGACAATCACCTGagccgcgagaaaaattgcaaGAGACAGAGCCAAAGATTGTCattgaacaaaaattaataactccATTGAAAAGTAATACTTGTCTGCTTCTCCAATCTTCAAAAACTACTACTCGAAAAATGACTCTGTTACAAATGCGCTACAATTGTCAAGAGTGCTATGTTGCCTTGAATAGAATTGAAAcaagtgaaaatgatgatgatgatgatgatgatgatgatgatgatagaGAAACAGAACAATTTTGTGACGAAAGATCTATTGGTGTTCAATTGAAGAATCTGGAAAtagcattgaaaaaattgcaagTACCTGATAGTCCCAGTAGAGAAAATTCACCTATAAAGACTGAAGATACAGAGgtacaaaattcaataaatataaaaaataatacgaTATACAGATCGAGTGTCTGTCGTACACGATTTACAACAAGGCAAAAACTCATTAATCACTATTTGTGTTTTCATACAAATGCGAGTCAGGATGAGTGTGGTATATGTAAAATACAATGTGGtaatttacataaattaaAGAATCATTTATTACTCCACTGTATCAAGATTATTCAATCGAAGCAAGATCGATCGCCCATTGATTCAAAGGCTCCTTGCGAAAAACATAGAAAGAAATACATGTGCCAGGGCTGCAAAAAACGCTTCTGGCTGGAATCTTGTTTACTTCAACACAAGGTATTTTGTAGATTTATTAAGGCAGAATATGAAAAGCAAATATATCAGGGAGAAAATGGAGAGATTGTTAGAAGAACTTCACCCAGGAAATTTgatagtaaaatcaataatattcaatCTGCTGCTGAGAATAAGAAAACTGATCCAATTGACAATATAGAATTACAAAATTCTTACTTggtaaatggaaaaaaatttcatgatcaATTGGATCGCTGGTGGAATAATAAAGTATCTCATCCAACTCCTGCATTTCCTTGCTCAGTTTgtaatataaattttcaatctgTCAATACATTGGcagaacatgaaaaaaaatttatgcaaaAAGATCCAAAGCGATGCAACCAGTGTGGAACACTATTTCCATCAAAAAGTCTTCTCATCAGTCACATGAAATTGACACACTCTTCAGAGTCGACAATGTATAAAATTCGTTGTCCAATATGTGATCAAGGATTTACtggtaaaaaatatatacgtTCTCATTTGCTCCATATTCATTATGATCAATTAAACAGAGACAATGTTAATGAGTGGGAAAAGCCTAATTCTGGATATGAAATGAAATGTAAAGTATGCAAacttatttttcaaaatcgtAAACGTTTTATTGAACATTGTATGTATTATTTTGAGGATGAGACATATAATTGTCAAAtgtgtgataaaaaatttcttggaaaatttcgttgtcattatcattggaaGACTTTACATTATTCCAAAGAGATGCAATTGGCCTATACACATTATTGTCCAGTTTGTAATGAAGGTTTTATCTTTCAATCACACTTACATTCTCACATGTTTCATATTCATGATCTTGCCAATGATGCTGGTATTAATGGAGGATGTAATCAAGCAAATGCCCAAGATCCATTTGTATGCTCAATTTGTGAACAAAGATTTTCTACAATATTGTTACTTGCTCACCATCAAAATCTCCACTCTAATGATGGTAATCATCATTGTGACAAGTGTAATAGAAAATGTCGAACAATTTCCATTTTAAATGATCATAAAAAAGCAACACACAACTCGATGGGTCTCTCAGATGTAGCGTCTAGTAAATGTCCTATTTGTGGAGAGGgaatattatcaaaaaaattgtggatagCTCACATTAAACATGTACATGAAAAACCAACAAATCAACCATCAGAATTTTGTTTGGAGAATATGTGTACACTCAATGAATTAATACATACTACAGACTCGGGACAAGTCAATTGTATTGAAATTGAACAACATTCAAATAGCTTCAATTTTACCACTggaaattgtcaaattttatACGATGAAGATGATCAACTGAGTATACCAGAGATACAAACAGCcaatattgaattcaattgtGCCATTTGTGATAACAAATTTACCTCAATgcttgaattaaaaaatcacaaaatcactcatgaaaatatttcatcaagaGAGAGTGGAGATTTAATTGGTGgtggtaataataattatcaacaaatacaaccaaaaattaattttccaaatattgaGATAGGCCACTTGCCCTTCATTTCATCCCAAGATTCTGCTGGTACATTTTATCACAGCTATCACCCCAAAAAAGATGTTGCctgtaatttttcaatctccaaTATATATTCAGTTGGACTAGATgagtatgaaaaattatcaaataatcaattgcaGGAGAATCACATTAATCgcatgaaaaatgatgaaaaaaataaaaatgtggagagtgatgaaatagcagataataattttaaatgtaATATTTGTCAGCTTGTTTTTACATGTGCTAAAACtcttcaaaatcatcaaataagATATTCAAATACTGGTGATTATATTTGTGAAGTTTGTGGAAGAAGATTCAAATGGTTGAAGGTATTTCGTTCACATGTAAGAAAACATCATAAAAAGAAGAATGACACAAGTCCCCTCTATTACTGTGAAAAATGTGATGAAGCTTTTGCCACTAGAAACTCAAGACTCATGCATTTTGCTCATATACATAATGATCCTGAAATGAAATCTCTCATTGATAATGATGTCACCATTGTTGATAGTAAAATAGTGGAACgtgaatcatcatcatcattattattacaaattaATTCAGCAGTAACAAGAAATCCCATAATATCACAAACACAAAGTACAAGAGAAAGACAAGCAAGCATTGAAGAGGTGGATTTGACTGAGGACGAGGAGGAAGAGGGTTGTGAATTATCCAATCCTCCTCTAGTTTTGAGAAATCCATTGTCATTACCAGTGGATGGTGCAGTAAAGGAAACAGCATCGCAAGTCAATGTTCAACAAACTGCCTATCGATCTATGGAGGTTGTCACCAATATTTGTCCAATTGTTTGCAATATTTGTCGCATTCAATGcataaatgttgattttctagttaaacattttgaaaatgctCACAGTCTACGTTTAACTCCTTATAAAATTGCTGATATATCTAATAATACACAATATCAAAACAATCTGACGGCGGCAGGCCAATCAAATTATCAACAGCATAACAATGAAACGGAGGCTGAGACACctccattattttattattgtaaaaCTTGTAGAATCCAATTTgctaatgaatattcattactCACTCATCTACGCAATGCTCATGCTAAAAATGACTCAGTTGCCTCGCAAcaggataataataattggaattTATTGGATACAATTTCAAGTGGCTCAGACAATGGGGTCAGTATGATGGGTTCAAAAGTTCAGGCGAAATCAACAGTTGGGGTAGCATCGATAGAAACTTGTTTTGTTAATGCTGAATCAAAAAGTCGATCCGATGAAATCGGCCCAGACTCatctactactactactactactactactactactactactactaccgAAAATGCTATGGATCTCACTAAAAAGAGAGCCACTGATAATGTTGTATTATCAAGAATTGATTTGAAACTCGCCCCTGACAGGCCTTATCGTATTCTTAGTGGAAAGGATTCacagaatattcaattaattagtcTCCAAAAGAAGGATCTGATGAATTTGACACGACAAAGATTACAGATGAGTAAAAGCCCTGAAGCTAGTAATATTCGTTGA
- Protein Sequence
- MARAMIYRGSSSLIAVDAPSDEVDPLELPIKNEPSSPMLESLLDFPQPPYDLPESTGVAEVPVPSSIEQSDDPLEPPPAPPANDGDDDDDDDDDDDKDSSSPASSSVHSTQLPNPQPTVSVNLNNSINNPKRQSFQCSQQLSQFVIDNCNKLKENRLRTRSNASNNYECDICFSQFNHRAGLKIHMKYYGTSKKHKHLVCHVCRKSVMTPLQLLSHRKSSHRHIVWQESAYKCDHCPLTFATKGSLQMHLFHYHDIGNNDKLQKRRVRESSSSVVLPVVENIQSESSRCKRKRRRDQLAEERAHSVLKNKKSFSKITNRPGPKFSKSQLSIHHSSKAQNSTSNDTPFVKIHAVPQEVEALLSDHDDSPMMKRKKFLHYQKLQENIDLKYLRSGKIVKRQSPEPREKLQETEPKIVIEQKLITPLKSNTCLLLQSSKTTTRKMTLLQMRYNCQECYVALNRIETSENDDDDDDDDDDDRETEQFCDERSIGVQLKNLEIALKKLQVPDSPSRENSPIKTEDTEVQNSINIKNNTIYRSSVCRTRFTTRQKLINHYLCFHTNASQDECGICKIQCGNLHKLKNHLLLHCIKIIQSKQDRSPIDSKAPCEKHRKKYMCQGCKKRFWLESCLLQHKVFCRFIKAEYEKQIYQGENGEIVRRTSPRKFDSKINNIQSAAENKKTDPIDNIELQNSYLVNGKKFHDQLDRWWNNKVSHPTPAFPCSVCNINFQSVNTLAEHEKKFMQKDPKRCNQCGTLFPSKSLLISHMKLTHSSESTMYKIRCPICDQGFTGKKYIRSHLLHIHYDQLNRDNVNEWEKPNSGYEMKCKVCKLIFQNRKRFIEHCMYYFEDETYNCQMCDKKFLGKFRCHYHWKTLHYSKEMQLAYTHYCPVCNEGFIFQSHLHSHMFHIHDLANDAGINGGCNQANAQDPFVCSICEQRFSTILLLAHHQNLHSNDGNHHCDKCNRKCRTISILNDHKKATHNSMGLSDVASSKCPICGEGILSKKLWIAHIKHVHEKPTNQPSEFCLENMCTLNELIHTTDSGQVNCIEIEQHSNSFNFTTGNCQILYDEDDQLSIPEIQTANIEFNCAICDNKFTSMLELKNHKITHENISSRESGDLIGGGNNNYQQIQPKINFPNIEIGHLPFISSQDSAGTFYHSYHPKKDVACNFSISNIYSVGLDEYEKLSNNQLQENHINRMKNDEKNKNVESDEIADNNFKCNICQLVFTCAKTLQNHQIRYSNTGDYICEVCGRRFKWLKVFRSHVRKHHKKKNDTSPLYYCEKCDEAFATRNSRLMHFAHIHNDPEMKSLIDNDVTIVDSKIVERESSSSLLLQINSAVTRNPIISQTQSTRERQASIEEVDLTEDEEEEGCELSNPPLVLRNPLSLPVDGAVKETASQVNVQQTAYRSMEVVTNICPIVCNICRIQCINVDFLVKHFENAHSLRLTPYKIADISNNTQYQNNLTAAGQSNYQQHNNETEAETPPLFYYCKTCRIQFANEYSLLTHLRNAHAKNDSVASQQDNNNWNLLDTISSGSDNGVSMMGSKVQAKSTVGVASIETCFVNAESKSRSDEIGPDSSTTTTTTTTTTTTTTENAMDLTKKRATDNVVLSRIDLKLAPDRPYRILSGKDSQNIQLISLQKKDLMNLTRQRLQMSKSPEASNIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -