Basic Information

Insect: Coelinius sp
Gene Symbol: L
Assembly: GCA_035578325.1
Location: JAOZGT010000003.1:6913066-6917739[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.6e-05 0.0029 18.4 4.3 1 23 98 120 98 120 0.98

2 18 0.35 38 5.4 3.9 1 23 126 148 126 148 0.97

3 18 7.6e-07 8.4e-05 23.2 4.3 1 23 154 176 154 176 0.99

4 18 5.3e-05 0.0058 17.4 0.9 1 23 182 204 182 204 0.98

5 18 0.016 1.7 9.7 0.6 2 23 243 265 242 265 0.96

6 18 0.012 1.3 10.1 0.6 2 23 298 320 297 320 0.93

7 18 0.047 5.2 8.2 0.2 2 23 328 350 327 350 0.89

8 18 0.16 18 6.5 0.1 3 23 385 405 384 405 0.96

9 18 0.027 2.9 8.9 0.5 2 23 417 438 416 438 0.96

10 18 0.0015 0.16 12.9 1.1 1 23 447 470 447 470 0.93

11 18 1.5 1.7e+02 3.4 0.2 1 23 475 498 475 498 0.89

12 18 2.4 2.6e+02 2.8 0.0 10 23 523 537 520 537 0.92

13 18 0.022 2.4 9.2 6.8 1 23 559 581 559 581 0.98

14 18 0.008 0.88 10.6 0.2 1 23 586 609 586 609 0.95

15 18 0.39 43 5.3 1.2 1 23 654 678 654 678 0.88

16 18 7.8e-05 0.0085 16.9 1.0 1 23 692 714 692 715 0.96

17 18 0.00096 0.11 13.5 0.4 1 23 724 747 724 747 0.92

18 18 6.4 7e+02 1.5 0.1 4 17 926 939 926 940 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.6e-05	0.0029	18.4	4.3	1	23	98	120	98	120	0.98
2	18	0.35	38	5.4	3.9	1	23	126	148	126	148	0.97
3	18	7.6e-07	8.4e-05	23.2	4.3	1	23	154	176	154	176	0.99
4	18	5.3e-05	0.0058	17.4	0.9	1	23	182	204	182	204	0.98
5	18	0.016	1.7	9.7	0.6	2	23	243	265	242	265	0.96
6	18	0.012	1.3	10.1	0.6	2	23	298	320	297	320	0.93
7	18	0.047	5.2	8.2	0.2	2	23	328	350	327	350	0.89
8	18	0.16	18	6.5	0.1	3	23	385	405	384	405	0.96
9	18	0.027	2.9	8.9	0.5	2	23	417	438	416	438	0.96
10	18	0.0015	0.16	12.9	1.1	1	23	447	470	447	470	0.93
11	18	1.5	1.7e+02	3.4	0.2	1	23	475	498	475	498	0.89
12	18	2.4	2.6e+02	2.8	0.0	10	23	523	537	520	537	0.92
13	18	0.022	2.4	9.2	6.8	1	23	559	581	559	581	0.98
14	18	0.008	0.88	10.6	0.2	1	23	586	609	586	609	0.95
15	18	0.39	43	5.3	1.2	1	23	654	678	654	678	0.88
16	18	7.8e-05	0.0085	16.9	1.0	1	23	692	714	692	715	0.96
17	18	0.00096	0.11	13.5	0.4	1	23	724	747	724	747	0.92
18	18	6.4	7e+02	1.5	0.1	4	17	926	939	926	940	0.89

Sequence Information

Coding Sequence: ATGTTATTCAAGGGGAATAGCTCGAGATTGGAGTTTCtgattgagaaaattcaagCCCACAAAGAATCACCCTCACCCTTGCCAGAAGAAAAGTGCAGCGTCAAACTAAAAGatGGATTATTGGGTGGCAATTACTCTTGGCGAAGTGAAGAGGACAGTTTGACCTGTCAACGAGGTGGTGGTACCCCCTCATCATGTACCACTTCCACCACATCTCAGAGTTTTCCATCAGAAACGGATATTGATGCCGATTTGAGGATTAATGCTGATACTGACAATTCATCCGGCCCATATTCATGTCAATTTTGCGATAAAACATTCCCCAGTCTGAGTTGTTTAAAAAAACACGAACAGACTCATGGCGATCAGATGCCATACAGATGCAGCTGGTGCGCAAGATTGTTCAAACACAAACGAAGTAGAGATCGCCACGTGAAACTACACACTGGGGACAGGAGATACCGTTGTACCCACTGTGAAGCAGCATTTTCACGAAGTGATCACCTGAAGATTCACATGAAAACCCACGACAACCAAAAGCCCTATCACTGTACAGAGTGTTCCCGTGGTTACAATACAGCAGCGGCACTGACCTCCCATATGCAATCCCACAAGAGACCCCCCAGCACCCCACACTATCAGCAATCCCTTCACACCTCCTCCCCTCCAGCGCTCGCCTCCCCAGATCTTCAGTCTAAGCTCCAATACCATTCCCCCCTGCACTTGACCTGCATGTACTGCAGAGACACATTCTCAACTATGAACCAACTTCAACTCCATGTCCAAACTGCCCACGAGACTCTTCTCCCTCTCCCCAGCCCATCATCCTCCACTCCTGATCCTTCTGATTGTTCAATATCCAGAACAAAACCGGATGATGTTGAAGATCTCACCTGCAGAAGATGTTCTGCTAAATTCAGCAAATTGTCATCACTACGAGATCACTTGGTCTCAGCTCATAACGACGGATTTCTCCCTCTGACCTGTCCATTATGCTCAAAGCCCTGCTCTTCAGCAACAGCATATGCTGAGCATTATGTTCTCGAGCACTGCGAGAACAAAAGTCCTCttccaaaattaaaaaatccacaagttgaaaaattttaccaaGAATCACCAAAAAACACAAATTACTCTTCAGGCATCCTCCTCTGTGGGCAGTGTGGAGCAGCCTTGAAGGACTTTGAATCTTTCAGAGCACATTTAGGGAGACATCTTCATGCCAATCAGCAGACAGCAGCCGATATTAGCTGTCCCAAGTGTGAGCTAAAGTTTCAGAAACGCGAAGACATGTTGATACATCTCACGAAGCACTTTATGGGGTTGgtgatgaagaaattccatTGTAATACTTGTGACAAGCTTTTCGAGGAGTCTGAGATGCTTCAGAAGCATCTACTAGATATTCACACTCATCAGTTGTATAGATGTAGCATTTGCAGGGATACATTTGATTCTATTGTTGGAATTCAGGTGCACTTTAATGTTAAACATTCGCAGGAGACTAATTTCTATCCATGCAACTCATGCAGAGGAAGAATTGGATGTGAATCTGATGGAGGAGAATTCAAAACTCCTGGAGAATTGCTGGACCACGTGAGAAACGTTCACGCACCTGAGCCTCTCAATTCTCCTGGCAATTCAGTCTCAACTCCTAGAGTCATTGGTGAATTCTTCAGATGTTGCTTTTGTGGAATATTTTGTTCCTCAAACAACGACCTTCAGCATCATCTCGCCAGCCACTCCACCTGTCTATTCAGATGTCACATCTGTAGGGAAGGCTTTCCTGTTGAGTTTCTTCTCGATAAACATATTGCAAATGCCCATAATTTGATTCAACAATCTGATGATTccgaagagaagaaaattttgaagagaaGAAGATCACCAGACTCCAACAGCAATATCAATCAACATGACAAGTCCCTCAACAATCCAACAATGTCAACAATACGAACTCATCAATGCAATCTCTGTGATAGATCGGATTTTTCCAATGATGCTGAACTCAAGTCTCATAAGAAGCTAGCTCACAAGACAATGTCCTCAAAAATACAAAAGCTATCATCTTTCTTTGTTTGTAGTTATTGTGGAGAGAGTCTGAGATCCAGACTCGAGCTGGAGTCTCATACCAGGATCCATCATGCGCCCATTGATCAAGGAAAGAGATACAAGTGCAATATTTGTGATGAAGTCTTCTCATCCGGAACTTTTCTTGCTGAGCACAAACTTCAGAAGCACTGCAAGATCCAAATAAGCGATGTTTGTGTTGTCTGCAGGGTTGTGCTTGGAAGTGAGAGAGACTTTCTTGAGCATGTTCATAAGCATAGTTTGGAGGGGCTAGAGGGAAAGGAAGGAATGATGAGCCATGTGCCAGCTCACTGTGTGGTTTGTAGACAGACACTTATTAGTGAGTTTGAGTGTCAGCTTCATGCCAAGTTTCATTTGAGAAATGATGAGAAAGAGCCTAGCGAGGTGGGAGAGATGGGAAGATGCTGTATTTGTTTGAGAAAGgtgggggagagagagagggtcaGTCTGCCGTCGAAAGAGATTGGGGGTGGGAGTCAACAGGGATTGAAAGTATGCAAGAGGTGTTTTTTGAGGCACACACAGGGACTACCTATCTTAACTAGTCCTTATGAGGTGTGCAAGGAAGAGGGAGTAGGGATTaaggaggaggagaaggaggaggaggaggaggaggaggaggagaaggagaggaaagagagagaaaagagctGTGGCTCAAAGgaacaaaataatttaacCCGTCCACACTGCAGTCAAagttttgtttttaaaaatcaattggagCATAGAGAAACATCAAAAGATAATTTAGAAAGTGTCATTGTTAAAGAGGAGATTGTCATGAATACTGAGGAGGATCAAAGTGATAGGAGGAGTGAGAATGGAGAGGAGGAGAGTCGTGATACTCTTGTGAACGATAAAGTTGACTAA
Protein Sequence: MLFKGNSSRLEFLIEKIQAHKESPSPLPEEKCSVKLKDGLLGGNYSWRSEEDSLTCQRGGGTPSSCTTSTTSQSFPSETDIDADLRINADTDNSSGPYSCQFCDKTFPSLSCLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYNTAAALTSHMQSHKRPPSTPHYQQSLHTSSPPALASPDLQSKLQYHSPLHLTCMYCRDTFSTMNQLQLHVQTAHETLLPLPSPSSSTPDPSDCSISRTKPDDVEDLTCRRCSAKFSKLSSLRDHLVSAHNDGFLPLTCPLCSKPCSSATAYAEHYVLEHCENKSPLPKLKNPQVEKFYQESPKNTNYSSGILLCGQCGAALKDFESFRAHLGRHLHANQQTAADISCPKCELKFQKREDMLIHLTKHFMGLVMKKFHCNTCDKLFEESEMLQKHLLDIHTHQLYRCSICRDTFDSIVGIQVHFNVKHSQETNFYPCNSCRGRIGCESDGGEFKTPGELLDHVRNVHAPEPLNSPGNSVSTPRVIGEFFRCCFCGIFCSSNNDLQHHLASHSTCLFRCHICREGFPVEFLLDKHIANAHNLIQQSDDSEEKKILKRRRSPDSNSNINQHDKSLNNPTMSTIRTHQCNLCDRSDFSNDAELKSHKKLAHKTMSSKIQKLSSFFVCSYCGESLRSRLELESHTRIHHAPIDQGKRYKCNICDEVFSSGTFLAEHKLQKHCKIQISDVCVVCRVVLGSERDFLEHVHKHSLEGLEGKEGMMSHVPAHCVVCRQTLISEFECQLHAKFHLRNDEKEPSEVGEMGRCCICLRKVGERERVSLPSKEIGGGSQQGLKVCKRCFLRHTQGLPILTSPYEVCKEEGVGIKEEEKEEEEEEEEEKERKEREKSCGSKEQNNLTRPHCSQSFVFKNQLEHRETSKDNLESVIVKEEIVMNTEEDQSDRRSENGEEESRDTLVNDKVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -