Basic Information

Insect: Coelinius sp
Gene Symbol: -
Assembly: GCA_035578325.1
Location: JAOZGT010000014.1:1629810-1632956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.025 2.8 9.0 0.4 3 21 8 27 6 28 0.85

2 13 2.4 2.6e+02 2.8 0.2 1 12 221 232 221 241 0.88

3 13 0.026 2.9 9.0 2.0 1 20 354 373 354 375 0.95

4 13 0.0017 0.19 12.7 3.5 3 23 381 401 380 401 0.97

5 13 1.3e-05 0.0014 19.4 2.4 1 23 411 433 411 433 0.98

6 13 0.00094 0.1 13.5 0.3 1 23 452 473 452 473 0.93

7 13 0.0008 0.087 13.7 0.1 2 23 479 500 479 500 0.95

8 13 5.7e-05 0.0063 17.3 5.2 1 23 559 581 559 581 0.99

9 13 2e-06 0.00022 21.9 3.7 1 23 587 609 587 609 0.96

10 13 8.7e-05 0.0096 16.8 5.1 1 23 615 637 615 637 0.98

11 13 4.3e-05 0.0047 17.7 1.2 1 23 643 665 643 665 0.98

12 13 0.00023 0.025 15.4 0.1 1 23 669 691 669 691 0.98

13 13 7.3e-05 0.008 17.0 0.2 1 23 699 721 699 721 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.025	2.8	9.0	0.4	3	21	8	27	6	28	0.85
2	13	2.4	2.6e+02	2.8	0.2	1	12	221	232	221	241	0.88
3	13	0.026	2.9	9.0	2.0	1	20	354	373	354	375	0.95
4	13	0.0017	0.19	12.7	3.5	3	23	381	401	380	401	0.97
5	13	1.3e-05	0.0014	19.4	2.4	1	23	411	433	411	433	0.98
6	13	0.00094	0.1	13.5	0.3	1	23	452	473	452	473	0.93
7	13	0.0008	0.087	13.7	0.1	2	23	479	500	479	500	0.95
8	13	5.7e-05	0.0063	17.3	5.2	1	23	559	581	559	581	0.99
9	13	2e-06	0.00022	21.9	3.7	1	23	587	609	587	609	0.96
10	13	8.7e-05	0.0096	16.8	5.1	1	23	615	637	615	637	0.98
11	13	4.3e-05	0.0047	17.7	1.2	1	23	643	665	643	665	0.98
12	13	0.00023	0.025	15.4	0.1	1	23	669	691	669	691	0.98
13	13	7.3e-05	0.008	17.0	0.2	1	23	699	721	699	721	0.98

Sequence Information

Coding Sequence: ATGGTATCTTCACTTCTAGTCTGTCCCATGTGTTGTGGAGAGACGTTTAATAGTTCTCAGTCACTTaaatatcatttattaagTATGACTGATAATTTATACTGTCCTGCTTGCTCACAGAGATCTGAATCTGTTGCTGCATTAATTCAGCATCTAGATGGCTGTGGTACTGGGAATAATGTTACTTTTGAGGAGACTGTTAGGGATATTAAGATTGGGGATAGTGAGGTACTGATGgatACAAATGTCGAACAAATTCACGAGAGTTTCCTAGCAACAGTAAATAACAAGGGTATTATGATAGTAGGAGGGCCCAGGTCACTAGAAGTGGACGAagatggtCAAATTAAAGTGGTCCAAAAAATGGAGACAGGGGAGGAGATCGATGATGAGTCTATTCTTCCTGATGAGGAGTATGAGGATCTCGAGAATATCGAGGATGAAGAATCCACAAGATTATCACCcatgaaaatagaaaactGTGATAATACCCCAGTGATAAGTATTCCAGAGACATCAGATGACAGAACAATTGCAATATTTCCTCATGAAACAACAGATTTTCTTGAGGACGAACAGAGTTTAATCGAAATTGATAATGGAGAGGAAGGTAGAGAGTTTGGAGAAGAGGAATTGATGAAgATCGATGCATCAGCTCTCTACAGTTGCAGCAGCTGTGGAATGGGTTTTAATTCAGTTCTAGATCATATAAAACAGTATCACGATGGTCAGGAAGTGGTCCTGGAGATGGCAGATGAGACACAGGTAGCTGAGGAGGAGCCTCAGGAGCCAGCAGAACCAGAACCTCAAGAGCCAGTCACAAAGACCAAGAGACAGAAGATGAATACAATTAAGACTGAGGAGTGTATTGACGCTGAGGGAAGACTTTATACTAGAAAAGTCGTGCAGATAGAGCCTTTCTGGGATCGTCTGAATCACAAGCAAAAGTCAACAAAGGCAACACCAACGAAGGGAACTCCAACTATTGAAAAGTTCTTTTCTAATACTGAAGGTGtcaagaCCCGTCAAAAAATCGATCCACCAGCACCACCAAAGGTCTACCGTTGCAACCAGTGCCTCGAGCATTTTCCCAGGCTCGCAGATTTCCGCACCCACGTGTGCCTCAACGGTTCAAACCACTGTGACCACTGTGACCAATCCTTTGCCACAGTAAAAGCCCTTCAACTCCACTCAAAGACCCACGACGACTCGACAGATGGCCAAAGTGAATTTATCTGTAAAACCTGCGGTACAAAATTCTCATCCCAAAAGAGTTTACGTTTACACTCTCGAATGCATGCCCCAGTGCGTGAGAGACACGTTGATGCACCTGAGGGTGATTCTGATGCCAATTTTACATGCCTAGAGTGTGGTAAATCATTCTCAGAGTCTTACAGAATAGCTCATATGGCTCTACACACTGGTGACTCGGCTACATGTACAGTATGCAatcgaaaatttgattcaGCCGATTCATTGGCAATGCATGCAGCTGTTCATCCAGAATTGGGAATTCCCTATCCAATGAATAATAAAGGAAAGTCTTCAAAAAgtgaggaaatgaaaaaaacaatgaaatctCCAAGTCCACCAACAAGTACTCCAGAGGGTGGTGATGATGCTGGTGAGACTGTTGGGAGCAATGAGAATGATAATGGAGATCTTTCGAAGCCCTACAAGTGCCAACATTGCGGTAGAAGGTTCACCAGACCTCATGAGAAGGTGAAACACGAGAGAATTCATACTGGTGAGAAACCACATGCATGTGAGGTATGTGGAAAGACATTCAGGGTGTCTTATTGTCTCACTCTTCACATGAGAACTCACACTGGTGTTCGTCCCTATGAATGTAAACACTGTGGCAAGCGTTTTAAAGCTTCATCAGTGTACAATCATCATTTATTGACACATGGAGACGAGAGAGCTTACAAATGTCCATTCTGTGTCAAGACATTCAAGACGAGAGTACAATTGGCAGGTCATAAAAACAGTCATACCAAACCATTCAGGTGTACTGAGTGTTCAAGACCATTTGCATCATTGTATGCAGCACGAGCGCACATTGCAACACACAAGAAGGACAACAACTTGAAGTTTACTTGTTTTATTTGTGGTGCATCCTATGGGCGTGCATTTGCACTCAATGATCACATGAAAAATCATGGTAGTGATACAGCATCAGCGCCTGAACCAGCACGTGaggaaattattaatgagaattttttattggagGATGATATCACTGAGCAGGAACTTACCGAGGGAATCAATCCTGATTTACAGTTGAGTGAGAATGGGATTATTAAGAAATTCGTGGACTGTGATTAG
Protein Sequence: MVSSLLVCPMCCGETFNSSQSLKYHLLSMTDNLYCPACSQRSESVAALIQHLDGCGTGNNVTFEETVRDIKIGDSEVLMDTNVEQIHESFLATVNNKGIMIVGGPRSLEVDEDGQIKVVQKMETGEEIDDESILPDEEYEDLENIEDEESTRLSPMKIENCDNTPVISIPETSDDRTIAIFPHETTDFLEDEQSLIEIDNGEEGREFGEEELMKIDASALYSCSSCGMGFNSVLDHIKQYHDGQEVVLEMADETQVAEEEPQEPAEPEPQEPVTKTKRQKMNTIKTEECIDAEGRLYTRKVVQIEPFWDRLNHKQKSTKATPTKGTPTIEKFFSNTEGVKTRQKIDPPAPPKVYRCNQCLEHFPRLADFRTHVCLNGSNHCDHCDQSFATVKALQLHSKTHDDSTDGQSEFICKTCGTKFSSQKSLRLHSRMHAPVRERHVDAPEGDSDANFTCLECGKSFSESYRIAHMALHTGDSATCTVCNRKFDSADSLAMHAAVHPELGIPYPMNNKGKSSKSEEMKKTMKSPSPPTSTPEGGDDAGETVGSNENDNGDLSKPYKCQHCGRRFTRPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYECKHCGKRFKASSVYNHHLLTHGDERAYKCPFCVKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIATHKKDNNLKFTCFICGASYGRAFALNDHMKNHGSDTASAPEPAREEIINENFLLEDDITEQELTEGINPDLQLSENGIIKKFVDCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -