Basic Information

Insect: Coelinius sp
Gene Symbol: -
Assembly: GCA_035578325.1
Location: JAOZGT010000001.1:16215151-16219332[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00044 0.048 14.6 3.8 2 23 375 396 375 397 0.94

2 14 5.9e-05 0.0064 17.3 0.2 1 23 404 426 404 426 0.98

3 14 4.1e-06 0.00045 20.9 2.6 1 23 432 454 432 454 0.96

4 14 0.00015 0.016 16.0 5.8 1 23 463 485 463 485 0.97

5 14 1.9e-06 0.00021 22.0 0.7 1 23 491 513 491 513 0.98

6 14 1.7e-06 0.00019 22.1 1.3 1 23 518 540 518 540 0.98

7 14 0.00073 0.08 13.9 3.4 1 23 547 569 547 569 0.99

8 14 0.0005 0.055 14.4 2.2 1 23 588 610 588 610 0.98

9 14 9.6e-06 0.0011 19.8 0.7 2 23 615 637 614 637 0.96

10 14 0.1 11 7.1 1.1 3 23 645 665 643 665 0.95

11 14 0.0063 0.69 10.9 4.7 1 23 671 693 671 693 0.98

12 14 5.6e-06 0.00061 20.5 0.4 1 23 699 721 699 721 0.97

13 14 9.4e-05 0.01 16.7 4.6 1 23 727 749 727 749 0.97

14 14 8.9e-05 0.0097 16.7 0.1 1 23 754 777 754 777 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00044	0.048	14.6	3.8	2	23	375	396	375	397	0.94
2	14	5.9e-05	0.0064	17.3	0.2	1	23	404	426	404	426	0.98
3	14	4.1e-06	0.00045	20.9	2.6	1	23	432	454	432	454	0.96
4	14	0.00015	0.016	16.0	5.8	1	23	463	485	463	485	0.97
5	14	1.9e-06	0.00021	22.0	0.7	1	23	491	513	491	513	0.98
6	14	1.7e-06	0.00019	22.1	1.3	1	23	518	540	518	540	0.98
7	14	0.00073	0.08	13.9	3.4	1	23	547	569	547	569	0.99
8	14	0.0005	0.055	14.4	2.2	1	23	588	610	588	610	0.98
9	14	9.6e-06	0.0011	19.8	0.7	2	23	615	637	614	637	0.96
10	14	0.1	11	7.1	1.1	3	23	645	665	643	665	0.95
11	14	0.0063	0.69	10.9	4.7	1	23	671	693	671	693	0.98
12	14	5.6e-06	0.00061	20.5	0.4	1	23	699	721	699	721	0.97
13	14	9.4e-05	0.01	16.7	4.6	1	23	727	749	727	749	0.97
14	14	8.9e-05	0.0097	16.7	0.1	1	23	754	777	754	777	0.95

Sequence Information

Coding Sequence: atgaaaattgtttgtgCTGCATCTGTCTGTAAATACTCATCTGAGCATGAAGACTCGAGTAATATTGTTTTTGTTAGTTTTCCAAATGATGATACTGCTACCGTCTGGGCCCACAATTGTAACAGACCCGATTTGATACCCAAAACAACCGAGGAATTGCATCAAAATTACTACATATGCTCAAATCACATTgagaatcataattttttttgtaaaaataatgagataattatgaCTCAGGGTGCAATACCAACAATTTTCCCCCTCCAAATGGACACCTCAGGTCACCTGAATCCAGTAAAATCATCCTACCCATCATCTGACGTCATAAACACGATAAACATGAGCAATTGTGAACACGATTATGTGTCTGAAAATTCAGACTATCGAAATACAATTTATGATGTAAATTTACTAAATGAAATTCATAATGATCATCATGAGCATAATGATGATGTTCATATTGAACAGTTTGTGAGTATAAACACGAGATTCTGTAATTTATGCAGAATATGTGGAAAAAATACGAATGAaggaattgatatttttgaaaaaaaagagaatgaaattaatttggaggaaaaaattcGACTGCATCTGCCCATTTGTGTTGAGAGGAATGATCCTATGCCCAAGAGGATTTGTAGGGGGTGTTTGGAGGGGCTGGAGGCTGCTCATGCACTTGTGGTTAATTGTTTGATTAATGATGTGAGATTGAGGAAATTGATGGATTTGCCTAATGGGcATAACTAccaagaaaaatatcaaattctcttaaaaaatATCCACGAATTGGAACAATCAAGAGACATAAACAACCCTGAACTCCCAAAAAATCCCCTAAAATCCCCCTCCAATCCCTCCCAAAcagaaaatcaaaaatacgTTTTCAACTCAGatctcaataatttaattctccaacCATTATCAACTGATGATACACACAAAACACAAAATCCTGTacaaaatgaacaaattaagGTACCGGATGAGACCATTTTTACCCctaaaaaatcagaaataaatttaccgaaaatttccaaagaattcaaatctcaaattgacgataaaaaattaattttagaccaaaaattgaaattaaaaaattcagaattaaaTCGTCGTTGTGGTCACTGCTCccagatattttcaaatcgTAAAGAATTACAAGTACACATGACTGAACATCATAATGATAAAGGGGTATTATTTAAATGTGGATTGTGTGATAAATCTTATGAAAAATGGTCGAGTCTTGATGTTCATGAGGCAACTCACAGACAGGATAAACCTTATCTTTGTGATCTATGTGGAAAGAGTTTTAAACACTCGAATAATCTCAGGGGACATAAACGTGTGCATTTGGATATTTCCAGGAAGAAAAAACATGTTTGTGAACATTGTGGAAGTGCTTTTAGATCTaggTTTCATCTGCGTGAACATATGAATCAACACGAGGGCAATAAACCCTATGTGTGTGAAAATTGTGGTAAAGCATTTTCGAAGAGAATACAATTGAGACAGCACAGATTGTCTCatggaattaataaatttactTGTCCAATTTGTGGAATGAGTTTCAATCGTAGAGGGAATATGAATACACATTTCAAGAGGCATAGCAGTAATGATGGAACATATAAGTGCAGTGTATGTCAATACAAATGCCCATCAATGAGTGCCCTGAAACTTCACCGTAAAACACACAACGAGACAGAAATAATTGACAGCATACGTCAAAAATCCCTcgacaaaattctccacaaatgCAATATTTGCAATCgattatttccaaaaatcactcaattaaaaaatcacgaaCGTATTCATGGGGATaaaattgagtgtgacacgtgtggtaaaaaattatcaacaaaaagtTCATTGAGATATCACATAAAGTCTCTTCATACATTGGAAAAATCACATTTGTGCCAATTTTGTGGTGATTCATTTGTATCAAAAGATTCACGATTAATTCACGAGAGAATTCACACTGGAGAACGACCATATTCATGTACATTGTGTACAATGCAGTACAGATGTTCGAGTAATCTCAATCAACACATGAAGAGTCATAATCATGTACGACCTTTTGTATGCGGATATTGTTCGAGAGGATTTACAAGAAAATCATCTTTAATTATTCACGAGAGAGGTCATACTGGAGAAAAGCCATTTATATGTTCAATTTGTGATAACAGATTTACCCATAAACATGAACTCAAGAAGCATGAACAGGTACATGATGATGGGATGTATAATTGTGAAAAGTGTGGAGAGATTTTTAAGAGTAAAGGAGAGATTCTTAGGCATTTGATGGAGGGTCATCCAGGGGATGAGAGTGGAGTTGTTGAATGGGTTTTTTTGGgagaatga
Protein Sequence: MKIVCAASVCKYSSEHEDSSNIVFVSFPNDDTATVWAHNCNRPDLIPKTTEELHQNYYICSNHIENHNFFCKNNEIIMTQGAIPTIFPLQMDTSGHLNPVKSSYPSSDVINTINMSNCEHDYVSENSDYRNTIYDVNLLNEIHNDHHEHNDDVHIEQFVSINTRFCNLCRICGKNTNEGIDIFEKKENEINLEEKIRLHLPICVERNDPMPKRICRGCLEGLEAAHALVVNCLINDVRLRKLMDLPNGHNYQEKYQILLKNIHELEQSRDINNPELPKNPLKSPSNPSQTENQKYVFNSDLNNLILQPLSTDDTHKTQNPVQNEQIKVPDETIFTPKKSEINLPKISKEFKSQIDDKKLILDQKLKLKNSELNRRCGHCSQIFSNRKELQVHMTEHHNDKGVLFKCGLCDKSYEKWSSLDVHEATHRQDKPYLCDLCGKSFKHSNNLRGHKRVHLDISRKKKHVCEHCGSAFRSRFHLREHMNQHEGNKPYVCENCGKAFSKRIQLRQHRLSHGINKFTCPICGMSFNRRGNMNTHFKRHSSNDGTYKCSVCQYKCPSMSALKLHRKTHNETEIIDSIRQKSLDKILHKCNICNRLFPKITQLKNHERIHGDKIECDTCGKKLSTKSSLRYHIKSLHTLEKSHLCQFCGDSFVSKDSRLIHERIHTGERPYSCTLCTMQYRCSSNLNQHMKSHNHVRPFVCGYCSRGFTRKSSLIIHERGHTGEKPFICSICDNRFTHKHELKKHEQVHDDGMYNCEKCGEIFKSKGEILRHLMEGHPGDESGVVEWVFLGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00351092;
90% Identity: iTF_00351092;
80% Identity: iTF_00351092;