Basic Information

Insect: Coelinius sp
Gene Symbol: -
Assembly: GCA_035578325.1
Location: JAOZGT010000027.1:146821-151145[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0017 0.18 12.7 3.6 2 23 67 88 66 88 0.95

2 27 0.013 1.4 9.9 0.8 2 23 93 114 92 114 0.97

3 27 0.0037 0.41 11.6 0.6 1 23 120 142 120 142 0.97

4 27 5.8e-06 0.00064 20.5 1.0 1 23 148 170 148 170 0.98

5 27 0.0029 0.32 12.0 2.5 1 20 179 198 179 201 0.93

6 27 2.1 2.3e+02 3.0 0.3 2 15 208 220 207 228 0.67

7 27 5.6e-05 0.0061 17.4 0.9 3 23 236 256 235 256 0.97

8 27 2.5e-05 0.0028 18.5 7.1 1 23 347 369 347 369 0.99

9 27 6e-05 0.0066 17.3 1.2 2 23 376 398 375 398 0.96

10 27 1.2e-05 0.0013 19.5 1.4 1 23 404 426 404 426 0.97

11 27 0.044 4.8 8.3 0.4 1 23 430 452 430 452 0.97

12 27 7.7e-05 0.0084 16.9 1.8 2 23 459 480 458 480 0.96

13 27 0.00073 0.08 13.9 0.2 1 23 486 508 486 508 0.97

14 27 0.15 17 6.6 2.3 1 23 515 537 515 537 0.97

15 27 3.2e-07 3.5e-05 24.4 0.8 1 23 543 565 543 565 0.99

16 27 4.8e-07 5.3e-05 23.9 0.7 1 23 571 593 571 593 0.98

17 27 9.4e-06 0.001 19.8 0.4 1 21 599 619 599 620 0.96

18 27 0.02 2.2 9.4 3.2 1 23 651 673 651 673 0.89

19 27 6.7e-06 0.00073 20.3 2.7 1 23 679 701 679 701 0.98

20 27 1.7e-07 1.8e-05 25.3 0.1 1 23 707 729 707 729 0.98

21 27 0.0004 0.044 14.7 2.6 2 23 736 758 735 758 0.95

22 27 1.3e-05 0.0014 19.4 5.0 1 23 763 785 763 785 0.97

23 27 2.9e-05 0.0032 18.3 1.2 1 23 794 816 794 816 0.98

24 27 1.3e-05 0.0014 19.4 1.5 1 23 822 844 822 844 0.97

25 27 3.8e-05 0.0041 17.9 1.3 2 23 851 872 850 872 0.97

26 27 1.4e-05 0.0015 19.3 6.0 1 23 878 900 878 900 0.98

27 27 3e-06 0.00033 21.4 0.4 1 23 906 928 906 928 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0017	0.18	12.7	3.6	2	23	67	88	66	88	0.95
2	27	0.013	1.4	9.9	0.8	2	23	93	114	92	114	0.97
3	27	0.0037	0.41	11.6	0.6	1	23	120	142	120	142	0.97
4	27	5.8e-06	0.00064	20.5	1.0	1	23	148	170	148	170	0.98
5	27	0.0029	0.32	12.0	2.5	1	20	179	198	179	201	0.93
6	27	2.1	2.3e+02	3.0	0.3	2	15	208	220	207	228	0.67
7	27	5.6e-05	0.0061	17.4	0.9	3	23	236	256	235	256	0.97
8	27	2.5e-05	0.0028	18.5	7.1	1	23	347	369	347	369	0.99
9	27	6e-05	0.0066	17.3	1.2	2	23	376	398	375	398	0.96
10	27	1.2e-05	0.0013	19.5	1.4	1	23	404	426	404	426	0.97
11	27	0.044	4.8	8.3	0.4	1	23	430	452	430	452	0.97
12	27	7.7e-05	0.0084	16.9	1.8	2	23	459	480	458	480	0.96
13	27	0.00073	0.08	13.9	0.2	1	23	486	508	486	508	0.97
14	27	0.15	17	6.6	2.3	1	23	515	537	515	537	0.97
15	27	3.2e-07	3.5e-05	24.4	0.8	1	23	543	565	543	565	0.99
16	27	4.8e-07	5.3e-05	23.9	0.7	1	23	571	593	571	593	0.98
17	27	9.4e-06	0.001	19.8	0.4	1	21	599	619	599	620	0.96
18	27	0.02	2.2	9.4	3.2	1	23	651	673	651	673	0.89
19	27	6.7e-06	0.00073	20.3	2.7	1	23	679	701	679	701	0.98
20	27	1.7e-07	1.8e-05	25.3	0.1	1	23	707	729	707	729	0.98
21	27	0.0004	0.044	14.7	2.6	2	23	736	758	735	758	0.95
22	27	1.3e-05	0.0014	19.4	5.0	1	23	763	785	763	785	0.97
23	27	2.9e-05	0.0032	18.3	1.2	1	23	794	816	794	816	0.98
24	27	1.3e-05	0.0014	19.4	1.5	1	23	822	844	822	844	0.97
25	27	3.8e-05	0.0041	17.9	1.3	2	23	851	872	850	872	0.97
26	27	1.4e-05	0.0015	19.3	6.0	1	23	878	900	878	900	0.98
27	27	3e-06	0.00033	21.4	0.4	1	23	906	928	906	928	0.98

Sequence Information

Coding Sequence: ATGCGTAAAAATGAGCAGATGAATTTAGTTAAaTTCCAAATTGAAGAAGAAGTAATATCAGATTCAGAAGACAGTAATCTTCCATTAAAAATAGTTGAGGTAGTTTCTGAGCCCGAGAAAGCCCAAAGAGTgactaaaaaaattctaaaaaaacgAATACGTAGAGAACCAGAAGAGCCAGATAATCCTGAAGATTTAAAGTGTCCCATCTGCCATAAAACCTTTAAAAAAAGGATTTATCTCAACTTTCACATAACAAGACACAGTTCATCATTATCTTGTCACATTTGCGACGCGAAAATGCCATCAAAATATTATCTAGACCTTCATATACGTAGACACAACAAAGAATATCTCTATTTCTGTCCAGTTTGTAATAAAGGTTTTTATATAAAAGCTTCGATGGATTATCACATGTCAAAGCACACAGATGAAAAACCATTTGAGTGTGAAATTTGTAAAAGAGCATTTGGTCACAAAGTTTATCTCAGAAAACACATGGCTATTCACAAAAAGCCAGTGGAAACGGAAAAATTCACATGCACCATCTGTGGTTACGTTACGTCTCGTCATGAATATCGCAAAAGACACATGTGGAGACACACTGGTGAGGGAAAAAAGCCCTGCAAGTATTGTGGAAAATTGATAACCAGGGCTTACATGCCGACACACGTTAGAACACATActggtgaaaaaaatgaaatgtgtGAATTTTGTGGAAAGACATTTTCATCCAAGGCATACATTGATAAACACAGAAGAGTGCACACTGGTGAACGACCATGTCTACGAGAGGAGGACCTAATATACTCTCAACCCGAGCCATTAAACACCGTAGCATACCAATTGTATACGCTTGAATCGATCCCATACGATGAAGATACTGAGCTGTACGAAATAATACAAAATGATGAGGATATAGAATTGACAGAAGCCTGTTTGATCGAACCCCTGTCATCCCCTGTGTCTCAAGCCTCTGACCCATTCTCTGAATCTCTCACTGATCCTCTCGACTCGAAATCACCAAGAATATTAATATACGAGTGTAACAACTGTCAaaagaaatttcgaaaaaaacaTCAGTACTTGCGACACCTTCGAACTCACGATAAATCATCAGGGAGCTCTTGTCCTCAGTGCGATCGATATTTTCCACATTATGAAAAACTACAGAAACACATGATCAAGGCTCACCAGAGAGACAGGCCCTTCCCCTGTCAGTTGTGTGGTAAAGGCTTCAAGACCAAAGAATTCCTAAAAGTCCACACGAAACAGCACAACAAACGATTCACTTGTGACATCTGTGGCATATCAAAGGTCTCAGGTTACGATCTACGTTTACACAAGAAGAGACACAATCAAGAATACACAACCTACTGTGCCGTATGCCACAAGGGTTTTTACACCAATCAGACGCTGGAGAGACATTTATTGACGCACACTGGAGAAAAGCCCTTCATTTGTAAAATATGCAATAGTGCTTATTCGAGTGCAGCTTATCTCAGTACTCACGTTAAATCCCACTGGATACAGAGGGAGAAACATAAATGCAATATCTGTAATTTCGAGAGCCACTGGAAAGCAGCATTGAAGGTTCACATGAAGATACATACTGGTGATAATCAATATACCTGTGACACGTGTGGTAAATCAGTATCTAGTAAAACTTATTTACGAATTCATATGAGAATTCATACTGGTGAAAAGCCTCATGTATGTGAAATTTGTGGTAGGGCTTTCAGTGTTAAGAAGTATTTGATGGCGCACTTGAGAACACACACTGGTGAGAAACCCTATGAGTGTAGGATATGTCAGAAGCGATTTTCACAGCAGGGAAGTTTGAATTCGCATGTGAGACTGTCAGACTCCCCCAAGTCACCAGTATCTCCATCAAAgactaccaccaccaccaacccGCTCCCGTCATCATCAACCCCATCATCAAGCACCTACACATGTAGAATCTGCAAAAAGCACTtcaaatcgaaaaatttgttCGACGGTCACCGAGTGGCCCACAGTGATGCACGTCCTTACCACTGTGAAATCTGCAACAAGTCTTTCAAGCGTACAAATACCCTCGCAGTGCACCGAAGAATACACACACGAGAGCGTAATTTTGTTTGTGATGTTTGTGGTCGTGCCTTTGTGCAAGCATCACAACTGGCAACTCATCAGAGACGTCACTTTGATAGATACATGTGCTACTGCGAACAGTGTGGCAAGGGTTTCTTCACAAATGCCGAGTTACATGGCCACATGAACATAAAGCATGGTGCTAAAGAGCACGTCTGTCACTCATGTGGTAAATCCTTTCCAAATAATCACACTCTCGTTCGTCATCTCAAAATTCACGATCCCAACTTCAAGCCAATTAAACATCAGTGTGAATTTTGTGGTAAAATATTtgcttataaaaattcattggtgGTTCATGTCAAGTCTCACACAGGAGAGAATAAATTTGATTgtcatttttgtggtaaaTCAGTGTCTTCACGGGGTTCTCTTCAGGATCATTTGAGGCTACATGGGGGTGAAAAATCTCTCGTTTGCGATGTGTGTGGTAAAGCTTTTCACAAAAAAACTACCCTCGTTGTTCATAAACGCACACATACCGGAGAAAAACCCTACACGTGTGATAATTGTGGAAAGTGTTTTACCCAGCATTCGACACTTGTTATTCATAAACGTTATCATACTGGACAACGACCTTATCAGTGTACTATTTGTACAAAGAGTTTTGTTTCTAGGGCACTATTGAATGCCCACAGCAAAGTGCACGGTGATGTTACATCCCTTGGGGATTGA
Protein Sequence: MRKNEQMNLVKFQIEEEVISDSEDSNLPLKIVEVVSEPEKAQRVTKKILKKRIRREPEEPDNPEDLKCPICHKTFKKRIYLNFHITRHSSSLSCHICDAKMPSKYYLDLHIRRHNKEYLYFCPVCNKGFYIKASMDYHMSKHTDEKPFECEICKRAFGHKVYLRKHMAIHKKPVETEKFTCTICGYVTSRHEYRKRHMWRHTGEGKKPCKYCGKLITRAYMPTHVRTHTGEKNEMCEFCGKTFSSKAYIDKHRRVHTGERPCLREEDLIYSQPEPLNTVAYQLYTLESIPYDEDTELYEIIQNDEDIELTEACLIEPLSSPVSQASDPFSESLTDPLDSKSPRILIYECNNCQKKFRKKHQYLRHLRTHDKSSGSSCPQCDRYFPHYEKLQKHMIKAHQRDRPFPCQLCGKGFKTKEFLKVHTKQHNKRFTCDICGISKVSGYDLRLHKKRHNQEYTTYCAVCHKGFYTNQTLERHLLTHTGEKPFICKICNSAYSSAAYLSTHVKSHWIQREKHKCNICNFESHWKAALKVHMKIHTGDNQYTCDTCGKSVSSKTYLRIHMRIHTGEKPHVCEICGRAFSVKKYLMAHLRTHTGEKPYECRICQKRFSQQGSLNSHVRLSDSPKSPVSPSKTTTTTNPLPSSSTPSSSTYTCRICKKHFKSKNLFDGHRVAHSDARPYHCEICNKSFKRTNTLAVHRRIHTRERNFVCDVCGRAFVQASQLATHQRRHFDRYMCYCEQCGKGFFTNAELHGHMNIKHGAKEHVCHSCGKSFPNNHTLVRHLKIHDPNFKPIKHQCEFCGKIFAYKNSLVVHVKSHTGENKFDCHFCGKSVSSRGSLQDHLRLHGGEKSLVCDVCGKAFHKKTTLVVHKRTHTGEKPYTCDNCGKCFTQHSTLVIHKRYHTGQRPYQCTICTKSFVSRALLNAHSKVHGDVTSLGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -