Csp012143.1
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- SMARCC2
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000008.1:6055475-6058910[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-14 1.3e-11 44.8 0.2 3 44 629 670 627 672 0.95
Sequence Information
- Coding Sequence
- ATGCTGACTCTCGGACCTAAAAAAGACGGTGGACCAAATACAAAATTCTTCGAGTCGCCAGATGTATTGGCACAATTGGATGGAGTCAAACAATGGCTATTGAAAAACTGCAAAAAATATGTAACAACAGATCCACCAACAAACAAAAGTTTAGCAGCCCTTGTGATTCAACTGCTTGAATTTCAAGAGTCCTATCTTGgtaaaaatgtttcaaaaccACCGTTGACGAGGCTTCCGATTAAATGTTTCCTAGACTTTAAGCCAAATGGTGGCCTCTGCCATATTCTGGCGACAGCCTACAAATTTAAGACGGAACAAACATGGCGAAAATTCGACTTCAATGTGCCCAAATCAGGCTCACGACTAGATCGCATTGTAGAAATGATGAGAGCAGCAGAGCGTGCCCTTGTAGAGAATCGCTGTCTCAGTATTCCCTCAGTTTACGTACGTCCTGAAGTAGAAAAAGCAACAGCAGCAAAAGTAAAAGAGACAGTGCGCCGTCATCAAGGAACAATAGCTGAAACTGAGACAGAAGCATCTCACATAATTTATCCAGCAGTTGATCCCACTGATGAAGAGTATGCTCGTCCTACAATGCGTCGTGATCGTTCAATTCTACTTCATTGGTACTACTTTCCAGATAGTTATGACTCATGGACGACATTCGATCTTCCAATTGAATTTCCAGAGGGAGGTTTTGGTGtttcattacaaaaatccACCTACAAAGTAACAGCCACATGGGCATTGGATTTGGATCAATACAATGAATGGATGAATGAGGAGGACTATGAGGTTGATGATAATGGCCAAAAAAAGATTCACAAGTACAGACTAACTGTTGAAGATCTCATGTCTCAACCCTCTCATCCACCCTCATCAGCAACCAAAAAACCCAAACGAAAACGTTCACCAAGTCCACCACCAAAACTTGGTAAACGAAAGAGTGGTCGTGCACCAGGCCTAACAGCAGGTTCATCAGTTGTTGCAACACCTAAGAAAACTAGAGGTGGTggagaagaagaggaagaTTTAACTCAGGGTATGGAGGATCCTCCAGCAGAACCAAGAATTGTCGAAGTTGTTTCAAATCCATCCAATTTACCAGCATCTGGACAAGGTACAACTGGTAGTATATCATctggaaataaaaaacaagATTCTGAACTTCAACCCTTGAAATCAGGCAATATGGCTGATCTTGATGAACCATTGGATTGTGACAAAGGTTCACAAAGTATTCAAGATCGTGAAGAGAGGGATCACAGTAAAGAACGAAGTGGTGATAATAAAGACGAACCTGAGGACAATGTAACTGAACAAACACACCATATTGTTGTTCCAAGTTATTCAGCCTGGTTTGATTACAATTCCATTCACACAATTGAAAAACGAGCACTagctgaattttttaatggaaaaaataaatctaaAACACCAGAGATTTATTTAGCATatagaaattttatgattgataCTTATAGATTAAATCCAACAGAGTATATAACATCAACAGCTTGTAGAAGAAATTTAGCTGGTGATGTTTGTGCTATAATGAGAGTTCATGCATTTTTAGAGCAGTGGGgattgataaattatcaagTTGATGCTGAATCTCGACCAACACCAATGGGACCACCACCAACATCTCATTTTCATGTATTGTCAGATACACCAAGTGGTTTAGCACCGGTTAATCCAAATCCACCCAAAACACCTCAGCCATCAGCAGCCAAGACTCTTTTAGATTTAGAAAAGAAACCAATAATAACACCTGAGGAGAAATGTGCTATTGGAGCTATGGCTAACTTTGGTTTGAAAATTGATCAGTATGCTCGTAAACCGGCAGTACTAAAAAATAAACAGGCAGCAGGTGCCACTAGAGATTGGACTGAGCAGGAGACTCTTCTTCTACTTGAAGGTCTTGAACTTCATAAAGACGATTGGAATAAAGTTTGTGAACATGTGGGCTCAAGAACACAGGACGAAtgtattcttcattttctaaGACTTCCCATTGAGGATCCATATCTTGAAGAGGGTGGACCTGAGGGCCTAGGCCCACTTGCTTATCAACCAGTTCCTTTTTCCAAAGCGGGCAATCCAGTTATGTCAACAGTTGCATTTTTAGCTTCAGTAGTTGATCCAAGAGTGGCTGCTAGTGCTGCTAAAGCAGCAATGGAAGAATTTGCAGCAATAAAGGATCAGGTACCAGCTGCTCTTCTTGATCAACATTTGAGAAATGTACAGGCAAGTGcgaatgatggaaaatttgatCCATCAGCTGGACTTGCATCATCTGGTATTGCTGGTACTGGACCGCCTGAGCCACCAGAGGAAAGTAATACACCAGGTACTCAGGCATCAGGCTCTCCACCAGCTGTGGCAACATCTGAAGGTAAAAAAGATGAAGCTGAAAAACCAAAAGACGCTGAAACATCACCAACTTCTGTTGTTGTTACTACTAATAAAAAGGAAGAAGGCACTGAAATTGAAGTAcaacaattggaaaaaatggatGTTGATGGGAAAGAGGAAGAGGCTGATACTAAAACTAAAATTGATAGTTCTGAAGAGGTTGAGGCTAAAGAGAAAAAGGATAAAGTTGTTAGGGATGCACAATTGCAATCGGCTGCTGCAGCTGCACTTGCAGCCGCAGCTGTCAAGGCTAAACATTTGGCTGCAGTTGAGGaacgaaaaattaaatcattggtTGCACTATTGGTAGAGActcagatgaaaaaattggaaattaaattacGTCATTTTGAAGAATTGGAGACGACAatggagagggagagggagggaCTGGAGTATCAGAGACAACAATTGATCACTGAGAGACAACAATTTCATCTGGAGCAACTCAAGGCTGCTGAGTTTAGGGCGAGACAACAGGCACATCAAAGATTAGCACAAGAGGCCCAACATCAGCAGCAACAGGCACAGCATCCACCATGGCAGGGACCTCAGGCGCAGCAACAACCACCAAGTCCACAGTCACAACAGCCAcagccaccaccaccacctcatACACCACCTCAGCAGGCATAA
- Protein Sequence
- MLTLGPKKDGGPNTKFFESPDVLAQLDGVKQWLLKNCKKYVTTDPPTNKSLAALVIQLLEFQESYLGKNVSKPPLTRLPIKCFLDFKPNGGLCHILATAYKFKTEQTWRKFDFNVPKSGSRLDRIVEMMRAAERALVENRCLSIPSVYVRPEVEKATAAKVKETVRRHQGTIAETETEASHIIYPAVDPTDEEYARPTMRRDRSILLHWYYFPDSYDSWTTFDLPIEFPEGGFGVSLQKSTYKVTATWALDLDQYNEWMNEEDYEVDDNGQKKIHKYRLTVEDLMSQPSHPPSSATKKPKRKRSPSPPPKLGKRKSGRAPGLTAGSSVVATPKKTRGGGEEEEDLTQGMEDPPAEPRIVEVVSNPSNLPASGQGTTGSISSGNKKQDSELQPLKSGNMADLDEPLDCDKGSQSIQDREERDHSKERSGDNKDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALAEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKPIITPEEKCAIGAMANFGLKIDQYARKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANDGKFDPSAGLASSGIAGTGPPEPPEESNTPGTQASGSPPAVATSEGKKDEAEKPKDAETSPTSVVVTTNKKEEGTEIEVQQLEKMDVDGKEEEADTKTKIDSSEEVEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEAQHQQQQAQHPPWQGPQAQQQPPSPQSQQPQPPPPPHTPPQQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00381005;
- 90% Identity
- iTF_00168357; iTF_01273030; iTF_01273714; iTF_00438015; iTF_00728594; iTF_00438686;
- 80% Identity
- -