Csp014131.1
Basic Information
- Insect
- Coelinius sp
- Gene Symbol
- bab1
- Assembly
- GCA_035578325.1
- Location
- JAOZGT010000010.1:5089409-5091161[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-10 5.4e-07 29.6 0.2 2 43 341 382 340 384 0.89
Sequence Information
- Coding Sequence
- ATGGAGCCATCATCGTCAGAACATCAACAATTTTGTCTTCGTTGGAATAATCATCGAGCTAATCTTTTGACATCATTCAATGAATTGTGGCACAATGGTGCATTTGCTGATGTAGTGTTTTTAGTGGGTCGTGATCCTGATCCTGTTCCCATGAAATGTCATAAAATGGTACTCGCAGCATGTTCAACATATTTTGCCAAAGTATTTGCCTCGAGTGATCAACTATCAACAATATTGTTACCGGGCATCAGAGAGTCAGAGATGAAGGCAATACTTGAATTTATGTATCAGGGTGAAGTAAGTGTTTCACAAGACGAAATGGCTGATATATTTAAAGTAGCACATCAGTTGGAAATCAAAGGACTTATGGAGTATGATAAATCACATCGTCCTCGAGGGCGTTCAGTGTCCCCACCACCGGCAATAACCAGTACAGAGCGTACAGCTTCGTTTGGCAATGATAGCATACACAATGATTATCGTTCACCTCCACATTCCACAAGTTCATCGGCATACTATCCATACGGTAAAGTTCCAACAATGGCTAATCATCCGGCTACCCACATGCCTCCAGCAGGATGGAGCCCACTATCCAGCCTCTCTCTAGCCCAATCGGTCATGAATTCACCACTCACTCCAAGAGCTGCAGCACTATTTCCAAGGGTCTACGAAGCGGATGAACATCATCTTCGCAAGCAGATGAACAGTCTCATATTGAATCGAGACACGCCAATTTTGAGAACTGTCCTTGGACAGGGACAGGCTGATAGCTCACAGGGTATTCCTCCACTTCATGTTGATCCTCATGATGTTTATCGAAGCTCGAGCAATGGCTCTGCTCATGATATGACTGATGGTCGCAGGAGTAGTTTGGATTTGTCTCATATTAGAAATGGGAGTGGACACAGTCCCTATTCACTTGAGATTTCGATGGAGGAACATGATAAGAAACCCTCGATGACGACGGCCGCTCATCAGAATCGTAAAAGCAAAGAGTGGAAACGCTACAAGCAGTACACAAAAGAGCACATGGAAAAGGCAATCAGAGCTGTTGAAAGTGGTGAGACAGCACTGAAAGCATCAAAAGCTTACGGCATACCCTCTCGTACGCTCTATGATAAAGTAAAGAAAATGGGAATAACAACGGCAAGAAATATTCGACGTCACCGGAGCACGAGTTCCGGTGCTCACTTTCCACATGGTATAGGTGGCAATAGGAATGGAAATATCTATCGAAGCATATCAGATCACGATAATGACAATGATTACAGCAATATGGAAGGTTCTGCAACTCTATTAGACATAGCTTATGGGCATGGCCGTGAACAATTGGAGGACGGAGAAGTCAGTTTGGACAATTCAACTAAAAGTATGAGTCCTGATGATGAGCAGCAACAGCAGGAAATAGAACAGGAGCATGATGATCACGTTCAAGATTTATCGATAAATCGTAGCAATGTTATCGTACCACCTCCAAATGTGCCCATCaaagaagaaattgatgatgCCTCGAAGAACTGA
- Protein Sequence
- MEPSSSEHQQFCLRWNNHRANLLTSFNELWHNGAFADVVFLVGRDPDPVPMKCHKMVLAACSTYFAKVFASSDQLSTILLPGIRESEMKAILEFMYQGEVSVSQDEMADIFKVAHQLEIKGLMEYDKSHRPRGRSVSPPPAITSTERTASFGNDSIHNDYRSPPHSTSSSAYYPYGKVPTMANHPATHMPPAGWSPLSSLSLAQSVMNSPLTPRAAALFPRVYEADEHHLRKQMNSLILNRDTPILRTVLGQGQADSSQGIPPLHVDPHDVYRSSSNGSAHDMTDGRRSSLDLSHIRNGSGHSPYSLEISMEEHDKKPSMTTAAHQNRKSKEWKRYKQYTKEHMEKAIRAVESGETALKASKAYGIPSRTLYDKVKKMGITTARNIRRHRSTSSGAHFPHGIGGNRNGNIYRSISDHDNDNDYSNMEGSATLLDIAYGHGREQLEDGEVSLDNSTKSMSPDDEQQQQEIEQEHDDHVQDLSINRSNVIVPPPNVPIKEEIDDASKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00351277;
- 90% Identity
- iTF_00351277;
- 80% Identity
- iTF_00351277;