Chom007937.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- mier1
- Assembly
- GCA_004302925.1
- Location
- PYHX01003336.1:1412480-1415143[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-08 4.6e-05 23.4 0.5 4 46 523 566 520 566 0.94
Sequence Information
- Coding Sequence
- ATGTCTCCGGATCCAAATTCCCTAAAAACTTCCAATGGTATGATAAAAGAAAGCGATGATTGtgaaaatacagaaaataattttgtcgaaTTTCAAACAAGCACCACAATAATATGTCATACAACAAGTAATATGGCTGAGAAGGAAACTGTTGGAAGCCTCACTAACAATAATCCAATCATCACACACATTAAAAATGGCATAGATGTTTTAGTTAAAACATCTTCATTATCCTTAACTCGCGAGAGGCGAAATGTTCCTTCGCCATCgattaatatacaaaatgaaACCTTCCTTGAACCCCCATCACCATCATCGTCATCTTCTACATCCCAGACTACAAGCGCAAATGATGCCACTTTCGAACCAACCATTGAAATGATGGTTAACGATTTCGATGATGAACAAACTTTAAATGAAGAAGAAGCTCTCGCTGCTCTAGAATCACAGGATCCAGCTGAGGAAataaatacactgaaagaagAAAGTGAAATGCCTTTAGAGGAGTTATTGGCTAAATATAGTGCTTTGCCACCATACCCACTTCCCTCGACCACATCATTTTCAGAGCCTTTAAGGAAAAAGTCGAAAAAGCTATCAACACATAAGAAGAAACATAAATCAAAAGGGAAATCTGAAGTTCAAACATTACAAACAATAAATGATGAAATAGTTGGGGAAACTGATAATAATATTGGAATCGAATCTTCTACATCTATGAAGAATCACAAAAAAAACGTTGATGTTGCAAACGATTTGCctgatgttaaaaaatttgaaaattatgacGAAGGCGGAGCCAGCTGCAGTACGCTATCACCGCTAAAGTTTCAAATATCATCATTACCTTTGGATGAGGAAAAACGAGATGAGGGTGATAATCTGCACATTAGGCAAAACGAAGTTCACAAAGTTTGTCGATCCCATTTACTTGATTTGTATCCAGAAGGAACGTTTGATAATGTCGTAGTTAATGATGCTATTGCAGGCAATAGTAAAGaaatagATATTCCTTTAGAGACATTGTATGGTGTTGAAGACGATGACGATGAAGATGAGGAAATCGAAGAAGACGAAGATTACAAAAAGAAAGTCATGATAGGATCATCATATCAGGCAACTATACCTGTTGGACTATCACAATATGGGGATATTTTACCCTATGAAAACGAAGATAAACTAATCTGGGAGCCAAGTCAAGTTAGTGAACGTGAAGTagaagaatatttattaaaaatacgtGATATTAAATCTAATCAACAAGGCgaggatgatgaagatgatgagaATGTCAATGGTAATTTCACAAACTGTGTGGAAaacaatacaaaagaaaatgatagaattgaaaaaaataaagataacatGGAAAATAACTCCCTGTTAGCGAATGGTAACAAAACGCAAGTGGATATAGCAACAGCTATAGAAATGGATGGTAATCCTGCTGTTGTAAAAGACAATGAACAGGCATTACATTTATTGGTTCAATGTGGTTACGATTTTAAGGAAGCATTACGACGCAAACGTTTAAATGCTTTACCTCTTAATGACTGTATGAGTTTATGGTCAGAGGAAGAATGCCACAAATTCGAAGAGGGAATTCAAAAATATGGCaaagattttctgaaaatacgACAAAATCAAgTGCGAACTCGAACAATGCGTGAGTTGGTTCAATTTTACTATTTGTGGAAAAAAAGTGAAAGGAGGGATCATAATTTTGCTAACGCAGATACGGTAGATCATatggatatttatttaaatgaagatAATGAATATGGCTCGAATTCAGCATCGATTTCAACTCCAGTAGGTTCACCAACTGGATATAATTCAAATTGTACAACTACAAGAAGAAATAGTAACACATCACAAAAAAGCATTTCTATAATGACTACGACGACTTCGTTAACGAATAATGTTACTCCAATGGCATCAACAACTTTACAGGCATCAGAAAAATGTGTTACGAATACAtctatgcaacaacaacaatacaataaaAGGCGTACAAACACTAGTTGTAACAACATCACAGTTAATGATTTAAATCATGAAAGTTCTTttaatccaataaaaaatttttcaaaatga
- Protein Sequence
- MSPDPNSLKTSNGMIKESDDCENTENNFVEFQTSTTIICHTTSNMAEKETVGSLTNNNPIITHIKNGIDVLVKTSSLSLTRERRNVPSPSINIQNETFLEPPSPSSSSSTSQTTSANDATFEPTIEMMVNDFDDEQTLNEEEALAALESQDPAEEINTLKEESEMPLEELLAKYSALPPYPLPSTTSFSEPLRKKSKKLSTHKKKHKSKGKSEVQTLQTINDEIVGETDNNIGIESSTSMKNHKKNVDVANDLPDVKKFENYDEGGASCSTLSPLKFQISSLPLDEEKRDEGDNLHIRQNEVHKVCRSHLLDLYPEGTFDNVVVNDAIAGNSKEIDIPLETLYGVEDDDDEDEEIEEDEDYKKKVMIGSSYQATIPVGLSQYGDILPYENEDKLIWEPSQVSEREVEEYLLKIRDIKSNQQGEDDEDDENVNGNFTNCVENNTKENDRIEKNKDNMENNSLLANGNKTQVDIATAIEMDGNPAVVKDNEQALHLLVQCGYDFKEALRRKRLNALPLNDCMSLWSEEECHKFEEGIQKYGKDFLKIRQNQVRTRTMRELVQFYYLWKKSERRDHNFANADTVDHMDIYLNEDNEYGSNSASISTPVGSPTGYNSNCTTTRRNSNTSQKSISIMTTTTSLTNNVTPMASTTLQASEKCVTNTSMQQQQYNKRRTNTSCNNITVNDLNHESSFNPIKNFSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -