Chom003872.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- DNAJC1
- Assembly
- GCA_004302925.1
- Location
- PYHX01002859.1:23699-25697[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3 4.3e+03 -2.1 0.1 6 20 23 36 21 55 0.67 2 3 8.9e-07 0.0012 18.9 0.0 4 38 302 339 299 340 0.93 3 3 2.8e-09 3.6e-06 26.9 0.2 3 43 390 435 388 437 0.80
Sequence Information
- Coding Sequence
- atgaaattatttgttacattaTTTATTGTCTTTGTTATGTCAAGCACACTTGTGCTTGGATGGGATACAGAggaattggaaatttttgatttggtggaggaaatcaataaaaatttttatgactttttggGCATATCAcaaAATGCTAccaataatgaaattaaaagggCATTTCGTGGTTTGTCAATACAACTGCATCCCGACAAGAATCCTTCTGAAGATGCTAATATTCAATTCCGTAACCTGGTGTCTATTTACGAGGTTTTGAAGGATTCATCAAAACGTGAAAAATATGACAAAGTATTGCGAGATGGTTTACCAAATTGGAAATCAGCTTTATACTATTATCGCCGTATGCGTAAAATAGGATTATATGAGGGTGGCGGTATCCTCTTTTTGATCGTAACTGTCGGTCAGTATTTATTCGCTTGGGCAGCttatttagaaaagaaatataCGGCTGAACAAGTGTttggttcaaaattaaaaaaactacagaagaaaaataaaaatattgatatggAAACAATTCTAAACGAAATTCCATCACCCTCCTTAAAGAACACATTGCCAATACAAATACCTCTGTTTATTTGGAATCTGCCATCAACAATTAAGGAAGGCTTTAATAAAGCGAATGAGTTAAAGGAAATGGCACTAGAAAAGCGGAGACAaGAATTGGAGGAAGCTAGACGACAGGAACAATTAGAAAAGGAATATGAAGAACAAGCAAGATTAcgtaaagagaaaaaagaaaatttgcgtaaacgcaaacaaaacacaaaagcACCAGAAAAAACTGAGGAAGAGCTTAAGGGCTATTCTCAAATAAAGGGCATAGAATTAACAGAAGATGATGCAATTAGACCGGTAACACAGAAGGCTACTTTAAGTGGAGGCTTTTGGACAGACGAAGATTTGGCAGAGCTTATacgtttagttaaaaaatatcctGCGGGCTTAAGTAATCGTTGGGtaataatttctgaaaatatgaACCGTACTGTTCAGGAAGTTACATTTATGGCcgccaaaataaaagaaaatggttTCCGTATAGCAGGTCAAACCGATAGTGTGGCCGAAAGCATAGTACAAGAAAcagtaaaaatagttaaaaaggaaaaagtaaaactgaaagagaaaaatattgttataccaGAAACGAACTGGTCTCAAGATCAGCAAAAGGCCCTGGAAGCTGCTATTGTTAAATACAGAAAAACCGCAGGAGGCGATAGGTGGCAAAAGATTGCGAATTGTGTCCCTGGCAAATCAAAAGAGGAGTGTTTGATTCGCTATAAATATCTTTGTGAATTGGTAAAATCGCAGAAAAAATCCGAGGAGTTTGGGACAAATTCAGAACAAGCttcaaataaagaaacaacTTTTCAAGATTTAGAGACAGAAGAAGAAAGTGTTCGGCCGGGTGAGACCAAACCAGTGACAGCGGAAGATTTAGCCGACGATATATCGGAAAAGGGGGGCAGCAAACGTAATAAACGCAAGGAAAGAAGAAGGCGAGATTTATCCTCAGACGAAGATTCTGatgatgtatatatttatgaagttaattaa
- Protein Sequence
- MKLFVTLFIVFVMSSTLVLGWDTEELEIFDLVEEINKNFYDFLGISQNATNNEIKRAFRGLSIQLHPDKNPSEDANIQFRNLVSIYEVLKDSSKREKYDKVLRDGLPNWKSALYYYRRMRKIGLYEGGGILFLIVTVGQYLFAWAAYLEKKYTAEQVFGSKLKKLQKKNKNIDMETILNEIPSPSLKNTLPIQIPLFIWNLPSTIKEGFNKANELKEMALEKRRQELEEARRQEQLEKEYEEQARLRKEKKENLRKRKQNTKAPEKTEEELKGYSQIKGIELTEDDAIRPVTQKATLSGGFWTDEDLAELIRLVKKYPAGLSNRWVIISENMNRTVQEVTFMAAKIKENGFRIAGQTDSVAESIVQETVKIVKKEKVKLKEKNIVIPETNWSQDQQKALEAAIVKYRKTAGGDRWQKIANCVPGKSKEECLIRYKYLCELVKSQKKSEEFGTNSEQASNKETTFQDLETEEESVRPGETKPVTAEDLADDISEKGGSKRNKRKERRRRDLSSDEDSDDVYIYEVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922039;
- 90% Identity
- -
- 80% Identity
- -