Chom012846.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- dnajc2
- Assembly
- GCA_004302925.1
- Location
- PYHX01002490.1:4320537-4330330[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.004 5.2 7.2 0.0 4 34 335 369 333 372 0.79 2 2 3.4e-13 4.5e-10 39.4 0.2 3 41 470 512 469 516 0.92
Sequence Information
- Coding Sequence
- ATGGTATTGCAGCACCATCCTGACAAGCGTAAAGCGAAAGGAGAAGATGTTAAGACGGATGATGACTATTTTACTTGCATAACAAAAGCATATGAGACATTAGGCACACCAAAAATTAGACGCGCTTTTGACTCGGTGGATCCTGAATTCGATGACTCGTTACCAACGCAATCTGATATTGAGAACAACTTTTatgaatcatttcaaaaatattttgatttaaatgctAGATGGAGTGAAAAAAAAGGAGTGCCTTCATTTGGTAACGAAAATTCTGCCCGTGAAGATGTTGAacgattttatagtttttggtaTGATTTTAAATCTTGGCGAGAGTTTAGCTATTTAGATGAAGAAGATAAGGAGAAGGGACAAGATCGTGATGAGCGTAGATGGATTGAAAAAGAGAATAAGGCAGCAcgaattaaaaggaaaaaagaggaAATGATGAGAATTCGTGCTCTTGTTGATTTGGCTTATAATAATGACAAacgtatacaaaaatttaaaaatgaggaAAAGGAACGTAAGTTGGCTGCAAAAAGAGCTAAAATGGATGCAGTACAAGCACAAAAGGCAGAACAAGAAAGAGCATTTCGCGAGGCACAATTGGCAAAAGAACGTGCAGAAAAGGCAGAACAGAAACGTATAGAACAAATACGAATAGAAAAGGAACAAatgaaaaaagcattaaaaaaagAACGTAGGATTTTTCGTGACAAAGctaaagaaagtaaatattTCGATAGCACCGataaagaaattcttaaaaatatggaaGGTGTTGAAAAGATTTGTGAGACTTTCAATTTAACCGAATTGCAGGAGCTTAACaagaaaatgttagaaaaaaatccaaaagaatCATTTAGCGCAGCTCTTAAAACAGCtgagttaaaaattaaagccgatttagaagaaattaaccaattacaaaataaaagcaaatcGGGAGCAATCAAATCTGAAACTATAATAAAGGAAGTGAAGAAAGCTGAATTGTGGGGCAATGAAAGAGTTCAACTCTTGATCAAAGCTGTAAATTTGTTTCCTGCTGGAACATCGCAGCGATGGGATGTAATAGCATCGTTCATAAACCAACATTCAACAGAGAACAATAACGTATCAGCACGAGATGTACTTTATAAAGCGAAAGCACTTCAAAATAGtgatttctcaaaaagttcacTTAAAACACAGGCAAACGAAAGCGCATATGAAAGTTTCaagaaatctaaaaaagatGTCATCGTACCTTCAGATATAACAGTAAATCCTGAGACAGGTAAAGCACAAAACTGTAGCGATACCAAAGAAAATCAAACGAATTGCAACACCATTAGTGTCAGCTCCAAAACTTCAAATCTTAATCCTGTTATATCTTCAAAAACttctataactttaaaaccTTGGACTAAGGAAGAACAAGCTCTGTTGGAACAAGCTATTAAATCATACCCAATATCAACTCCTGACCGATGGGATCGTATTGCCAAATGTATACCTAATAGAACAAAAAAGGACTGTCTACGCAGAGTCAAGGAACTTGTTGAATTAgttaattctaaaaaagaagCACAACAAGCAGTTAAATGA
- Protein Sequence
- MVLQHHPDKRKAKGEDVKTDDDYFTCITKAYETLGTPKIRRAFDSVDPEFDDSLPTQSDIENNFYESFQKYFDLNARWSEKKGVPSFGNENSAREDVERFYSFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENKAARIKRKKEEMMRIRALVDLAYNNDKRIQKFKNEEKERKLAAKRAKMDAVQAQKAEQERAFREAQLAKERAEKAEQKRIEQIRIEKEQMKKALKKERRIFRDKAKESKYFDSTDKEILKNMEGVEKICETFNLTELQELNKKMLEKNPKESFSAALKTAELKIKADLEEINQLQNKSKSGAIKSETIIKEVKKAELWGNERVQLLIKAVNLFPAGTSQRWDVIASFINQHSTENNNVSARDVLYKAKALQNSDFSKSSLKTQANESAYESFKKSKKDVIVPSDITVNPETGKAQNCSDTKENQTNCNTISVSSKTSNLNPVISSKTSITLKPWTKEEQALLEQAIKSYPISTPDRWDRIAKCIPNRTKKDCLRRVKELVELVNSKKEAQQAVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01374004;
- 90% Identity
- -
- 80% Identity
- -