Chom012367.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- -
- Assembly
- GCA_004302925.1
- Location
- PYHX01002114.1:141407-142583[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-10 1.2e-06 28.5 0.8 4 46 34 89 32 89 0.87 2 2 9.5e-08 0.00012 22.0 0.3 3 43 146 199 145 202 0.83
Sequence Information
- Coding Sequence
- ATGAATATTAAAACTGAATATGAAGCCGAAGTTGGCCCTACAGAAATGGTATTTGAAACAGTGGATTTAACTCCAAAAACCGCCAAGACTATATCATTATGGTCAAATGCAGAAACTAAACAGTTAATGGATCttcatagaaatttaataaatgaagtTGGTAATCAGAAAAGATTTAAACGTAAAAAGGACATGTGGATGGAAATATCCTTGCATTTTCCAAATCGAACTCCCAAACAATGCGAAGAACGTTTTAAGACAGTGCTTAAGcgtaaaaagaacaattttggtAAAGTCTATATATCAGaggcaaaaagaaaaactatagaaataCTCGATAATAAACCagagtttgaaaataaattccaaattattcGCAGACctaaagttgaaaataatagAGAAGAGTTTcttatcaataataaaaatatttcagCTTGGACATTAAGTGAAACAAAACAACTAATCGAACTTTACAAACGTCTAATTGGTGAAGTTGGTCCACAAAGAAGATTTAGCCTGAAAAAAGATATGTGGACCGAAATATCATTACACTTTACGGATAAGACTCCAAAACAATGCGAACAACGTTTAAATGCggtgtttaaaagaaaacagcAAATTTGCTTAACAAAGGAAACCAAAAAATCGGTTGTAGTTCAGCCAAAGAATCCCTGTAACACCTTTCAAATcaataaagttcaaattttgaaaaataacataaattctgATGACAATGAAGCGGAAGAAACATTTAAAGCCCCAATAAATAAAAGTTCGAAATTAGAAAAAGATACAGATCCAATTGCACcagaaattgaaacaaataaaataaaagcaaataaagaAATGTCCTTGAATGAGGTATTATTGCATATAGCAGCAAAACGTGAAGAAGGAAAAGAAAGACGCCATAAAGAAAAATTGCAGGCAATTTCGAAGATGCAAGATATATTACAACAACTGTTGGActtgaaaaagaataaaaaaaattaa
- Protein Sequence
- MNIKTEYEAEVGPTEMVFETVDLTPKTAKTISLWSNAETKQLMDLHRNLINEVGNQKRFKRKKDMWMEISLHFPNRTPKQCEERFKTVLKRKKNNFGKVYISEAKRKTIEILDNKPEFENKFQIIRRPKVENNREEFLINNKNISAWTLSETKQLIELYKRLIGEVGPQRRFSLKKDMWTEISLHFTDKTPKQCEQRLNAVFKRKQQICLTKETKKSVVVQPKNPCNTFQINKVQILKNNINSDDNEAEETFKAPINKSSKLEKDTDPIAPEIETNKIKANKEMSLNEVLLHIAAKREEGKERRHKEKLQAISKMQDILQQLLDLKKNKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -