Chom012026.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- -
- Assembly
- GCA_004302925.1
- Location
- PYHX01001189.1:975993-978557[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.3 1.7e+03 -0.9 0.0 10 43 157 196 156 199 0.69 2 5 1.6e-13 2e-10 40.5 0.3 1 45 205 250 205 251 0.97 3 5 1.9e-05 0.025 14.6 0.1 3 43 261 305 259 308 0.83 4 5 1.3e-11 1.7e-08 34.3 0.0 4 46 317 360 314 360 0.93 5 5 4.3e-05 0.056 13.5 0.2 3 45 368 412 366 413 0.93
Sequence Information
- Coding Sequence
- atggCTACAAATACAAATGATGAAATGAGAAGCAAATTGGAAGATACTTTAAAGTTGAATCAACAAATGCAGATTCAACTAAAGGCAATGAAGGGAAagcttgaaaaattattattaaacgttaaagaatcttataaaaataatgaaattttactaaaggaTGGCATTATAAGAAGACGAAAGAAAGGAGTTGGTATTAAAGGAGCTTATTTGAAGGGAGGAACATTTTATCTAAAAgggaatatgttttttaaagatataaattgtCGCAATTGTCCAAATAATCCCGATTATGAAAgtagaaaattggaaaaagaaaTGTTTCCCATGGATTTGAATTTGAAGTCGAGACATGTTTGGTCTACCCAGGACAAACAGAGGGTAATATTGGGCATTAAAGAACAGATAGTCGATTATATGTCACAAAGTCATAGCAAGCAAGAATatggaaataaagaaataaacagtGAGAAATTGGCTAAACTTTTACAAATAGTACCCCAAGATTTTAGCATTGATTGGGATCATATATCGAGTTATAATTTACAACATCGTCATACGGCCAAAACATGTGAAgcaatttggaatttatttttacatcccTCATTGAAGCGCTGTGCTTGGTCTGAAGAGGAAAATCAAAAACTATTAGAAGCCGccaaaaagtacaattttcaaaattggcaAGCTATAGCCAATGAAGTTGGTAAAAGATCAGATTTTCAGtgTTTTGTTCAATATCAAAATTACGTATGTTATTTATTGCCTGAATCTTCCACTAAATGGACTAAAGAGGATGATAAACGTCTCCGtgaagttatagctaaaaatatggTAAATGGCATTATTAATTGGAGCAATGTAAATGCACACTTTCCACATAAAGCTAAAACTACACTTCATACACGTTACAACTATACGCTCAATCCTGCTATAAGTCATGcTCAATTTACACCTGAAGAAGATCTTCTCCTGATAGCGGCCGTTAAAGAATATGgcacaaaatttaattgtattccACGTACTTTATTTCCCAATCGATCGTTGGTACAATTGCGTGctcattataaaaatgttttagctAAACGTCACAATCATCATCCATGGTCTTTAGAAGATGATGTAAAGTTAATGGAATTTGTAACAGCAAATGGCACCAAAGAATGGCTGCAATGTGAGCATTCTTTTAATGGCAAACATTCACGCACAAGTTGTCGTACAcgttttttaacaattaaaaaatatttggaaaaaaatcctgATGCCAGTATTGAAGATATTGGAAGAAAACGTTTAAGAGCAactaaatctataaatattgaaaattggaaGGATAAAATTGTGGAATTGTCTACAAATCCAAATGGTGTAGaactaaataaaacagaaaatgaaTTTGTAGGAAAACCCAAAGttgaaaagattaaaaaatcgactaaagaaaaagtaaaaagaacaaaaaaattaaacataaggACTACATCTTCTGATACTATAGAACCAAATGAAGtattacaattacaattgtATGAGAATCAAACGAATGATGAGAAGAAAccaattttacaagaaaatcaAACAACAATAGTTGATGAAGGTCCGCGAGtaacaaagaaattaataagAAGAGATAGAAAGTCAAAAGCTATGGAGAAATTTATGATAGAAATACCATCAGAAGAAGGTAATTTACAAACCATTAccaaaaatgaacttaaaaaatgtataagaaaGACAAAACCTGAAGAGaaagtaaaagaagaaaaacccTATTTACCACGATTAAGAGCGAAtgctcttaaaaattataacttttttaaatatgcttataatttaaatatggatCAGCGTCCTTGTgataatatacaaataataaataatgatttaagtCTCACCGTGTCAGCACTAAATCCTCAAATATCTTCATTACCGGAAGCATATGAATTTAGCTCCAGCATACCCGaacatattaaacaaaatataaaaacttgttttaaacaAGTTTCCACCAATGGAAATCTACCTTTATTACCTCCTAATTGGTCTACGGCTATGGGATTCCGAGCTCTATGCATTCAGACAGCAAGTATTAGATCTAATATACCAACACATGAACAAATATCTGAGTTGAATACTAATACTCATATAATACAATTTCGAGAACGCTTGCGTTCACTTTTTTATTCAACAGCTCTACTAAGTCGTTTGAGTCCTAATTTAGTAGGCATAACAACCATGCAGGAGATTGAAACACCTAAAGTCATTAAACGCAAACGATCATATAGCAAGAAAGATAATGAAgataatataaataagaaaagtaaatGTGTAGAAGTAATTGATAATATTAAGACAGAATTAgaaatgtaa
- Protein Sequence
- MATNTNDEMRSKLEDTLKLNQQMQIQLKAMKGKLEKLLLNVKESYKNNEILLKDGIIRRRKKGVGIKGAYLKGGTFYLKGNMFFKDINCRNCPNNPDYESRKLEKEMFPMDLNLKSRHVWSTQDKQRVILGIKEQIVDYMSQSHSKQEYGNKEINSEKLAKLLQIVPQDFSIDWDHISSYNLQHRHTAKTCEAIWNLFLHPSLKRCAWSEEENQKLLEAAKKYNFQNWQAIANEVGKRSDFQCFVQYQNYVCYLLPESSTKWTKEDDKRLREVIAKNMVNGIINWSNVNAHFPHKAKTTLHTRYNYTLNPAISHAQFTPEEDLLLIAAVKEYGTKFNCIPRTLFPNRSLVQLRAHYKNVLAKRHNHHPWSLEDDVKLMEFVTANGTKEWLQCEHSFNGKHSRTSCRTRFLTIKKYLEKNPDASIEDIGRKRLRATKSINIENWKDKIVELSTNPNGVELNKTENEFVGKPKVEKIKKSTKEKVKRTKKLNIRTTSSDTIEPNEVLQLQLYENQTNDEKKPILQENQTTIVDEGPRVTKKLIRRDRKSKAMEKFMIEIPSEEGNLQTITKNELKKCIRKTKPEEKVKEEKPYLPRLRANALKNYNFFKYAYNLNMDQRPCDNIQIINNDLSLTVSALNPQISSLPEAYEFSSSIPEHIKQNIKTCFKQVSTNGNLPLLPPNWSTAMGFRALCIQTASIRSNIPTHEQISELNTNTHIIQFRERLRSLFYSTALLSRLSPNLVGITTMQEIETPKVIKRKRSYSKKDNEDNINKKSKCVEVIDNIKTELEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -