Chom004656.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- ct
- Assembly
- GCA_004302925.1
- Location
- PYHX01001118.1:1558020-1598339[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.5e-27 5.5e-23 80.7 0.0 3 72 1006 1076 1004 1081 0.94 2 3 6.1e-32 5.1e-28 96.8 0.0 3 77 1434 1509 1432 1511 0.96 3 3 6.2e-31 5.2e-27 93.6 0.0 3 77 1690 1765 1688 1767 0.96
Sequence Information
- Coding Sequence
- ATGAAAGCCAAAGGCTATTTTTTGTGTTCAAAAACAGAGACGACAAAAGCTATAAAAAGCTATAAATGTGAATATCCTTTAACATTATGGTTGAGTGCTTTAAGTAAAACTGGCTGGCAAATAAGAGCTACCTTGGCTGAAAAGGAAGTTAATACACTGAAAGAACAACTATCCACCAACACAGACTCAAACAGTGATAATACAACAAATAACGGTGACTTAAGTTTGGCCACCAGCACAGCTAACAATAACGCTGAAtctaatacaacaacaacaaacgaaGACGTTGAAGAAGTTTTAAATTCTGAAATCCCACCAAATAAATTGTTATCGCCCGCtttcaataacaacaatacaaaattattgaatagTGTAGCAGCAGCTATAACTTTACATCAAAACGGTGGTAATCTATTGGCCACCACACCCTCACCCTCACCACCACTCTCGGAATCACATCTTAACCTAAGTGGTTCACAAGAGGAGCAAGAACAACAACTAAACGGTTGTTTAAatcctaaattattttttaatcacgCCCAACAAGTAATGATGATGGAAGCAGCTGCTGCTGCAGCGGCTGCAGCAGCCGCCGCAGCTGCAgtacaacagcaacaatctCCCATGCATTCACCACAACCTGCAGCAGCTGGACAACAGCAAGAACAAGATAATGAAGCTTTATTAGCTAAACCCACCAATACTAAAGAAATCAATGATAATTTTGATGCTCTTAAATTAAGTGATACTCAAAAATCCCTATCGGATTCAAAAGAACAAAATAGCATTACTACACCATCAACAACAGAGAATGATAATTTATCTAAGGACCCAGAAAGAGAAGAAATAGAAGAAGCTTTAAGAgctgaaaataatacaaataataataacaacaataacaatataaatagttttaatagtgataacaataaaaatagtttaaattctcctaaacaaaatagtttattaGAGAATAAGAGCACAACAGCCGAAATAGAAGAGCAAGAGCAGGAACAGAAAGAACCTCAACAACATCATATGGATGTAACAGAAGAGTTAAGAGGGAATTTATtagataataataatgaaatgaaaaacaatcATATGGATTTATTAGCTGCCAAAGATAAAGAGATTAAAGCCTTATTTGAAGAAGTGAAACGTTTACGTTCAATCGAACAAACTCATTTAATACAAATCCATCGTTTGGAAGAACATTTAGAGGCAAAACGTCAACATATTTTACGTTTAGAATCCAAATTGgataaacaacaaattaatgaaGCTTTATTGGAAACCTCCCTAGAACAGAgaacatcatcttcatcatccgCCGCTTTAGATGCCACCAATAACACCTCCAAAGACTGTGAAATAGTGGAATCTAAAGAGAAATCTTTAACAGAAACTTTAACCATTAATGAAGATGAAGATGAGGATGATGAAGTTCAAGAGATCAatacaaaagagaaaaactgTGATTTATTAAGAGATAATGATAAAGTAAGAGATGAAGATGATATGGAAGATGATATGGAAGagagtaaagaaaataaacagaaTGCAGAAAATAtggaagaagatgaagaagaatgTACAAAAGATGAATTAAaggaaatacaaattaaaaaggaaacacAATCCCCCTTATCTTTAGACTCGATAAGCCAACAAAATGCCATTGCTGCTGCCGCCGCTGCAGCAGCTGCCTGCAATAATGATCCCAATAAATTCCAAGAATTATTAATGGAACGCACCAAAGCTTTAGTAGCCGCTGAAGCTTTAAAGAACACTGAAGACTCCAATATTATACTCCCAGAAGAGGACAAAGTTATACAATCGTTAGATTCTCTAAACAATATAAATTCCTCTGAATCAGCTCCTCCCGCAAATGAGGATTTACAAAATGCTTCTTCATTATCTTTAGAAGCTGGTAAAGTgccaaaaattgaaatcttagacgatgatgatgatgatgatgaggaggTATTAGAAATAAAACGCTTAGAAAATTCGCATGAAAAATCGTTAGAAGAAGAATGCGATCCCTCCAACtcgaattttaaacaaaatgtagaacgttTTGGTTCTTTATTGGGTGAAGAATTGGTAAATTCTTATTGGCGTCAGGGTTTTGAAAGCTCTAAATCGTTATATAACACTAGATATCCATCAGCTAATCAAACGCCTACACCCTGTTCGCAACAAATGCAGATAACAACTTCACATCAAGTGCATCAATTAATTACACCCACTAATATGCATCATGCCTCAACTttacagcaacagcaacaacaacatcatcatcaaccTCACCTAcatcaacatcagcaacaacagcCTTTACAAACGCATTTAACTGCAGGCTCTTCTTGTGGTCCCTCTTCGACCACTTTGCTTAGTCAATTAGTTAATTCTACTTTttctaacaacaataacaacaacaactctaaTATAATTACAACTCAAACTTCCTCCTCCTCTTCTTCTTTACGTTCTGCAGATGGTTTTAGCCATACACAAACAGGCTCAGCCCACCATCATCATCTCAGCGCCCATCATCCTCTACAACATCATGCCCAATTGCATCATCAATTGCCCCACCATTTGGCCGAACAACATGAAAAATCCTCCTTAGAACGTCATCATGATTCTTCAGCATCTAGTGCCAGTACGCCCAATTTACAGGATCAACAACGCCATCAAGATGAACATCATAGTTTGTCATTGAATGGTTCTTTGAAGAATTTAGAGGATAACAATAATAGTCTGTGTGGCACACCCACCAGTCATCATATGTCTGGGGCCCATAGTGCTCACTTGCCTCATGGCTTTTTACCCGGTCTACCATTCCAATTTCAAGAACGTGGTCATTTCCGTTTTGCCGATGATTTACAATTACCGCCCGGCACTTCAATGGCTGGACGTTTGggtgaatctttaatacccaaAGGTGATCCTATGGAGGCTAAATTACAGGAAATGTTACGTTATAATATGGATAAATATGCCAATCAGGCTTTAGATACTTTGCATATCTCAAGGCGTGTAAGAGAATTATTATCAGTGCATAATATAGGGCAACGTATATTTGCCAAATACATATTGGGTTTGTCACAAGGTACCGTATCGGAATTATTATCGAAACCTAAACCCTGGGATAAATTAACCGAAAAAGGACGTGATAGTTATCGTAAAATGCATGCCTGGTCTTGTGATGATAATGCTGTTATGCTGCTTAAGTCTTTAATACCTAAAAAAGattctGGTTTACCTCCTTATGGTAGTGGCGCTGGTGGTCGTGATGATTCAATGTCTGATGAACGTATTGCTCATATCTTAAATGAGGCTTCTTCATTAATAAAATCCTCAGCAGCAGCGGGTGCTTCTGCTTTACATCCCTCTCAGCAACAGCAGCATGAACATCAAAGAAGATCCTCTACCATAGCAGAAGATTCACGCAGCAATGATGATTCAAAATCTCCTCATCAACCTTGTTCTTCGCCTTTCTTTAAGGATCATTTAAGTAAATCACAAAGTGAGAGTGTTTTATCGGCTCCAGGTCATTTACGTGGTGATGATATGAATCCCGAGAAAATGGCCAGACTTTATCAAGAGCTAATGGCTAGAGCTCCTCGTGAAGCTTTTCCTggTGGCGGTTTACCTTCCACCGCTGGCTTCCCTGGTTTGGCGGCCGATGATAACATGCGTTTAGCTTTTGAGCGTGAAATGTCTAAattgcaacaacagcagcaacagcaacatcaagCTGCCAATCAGCCAGCCAACTTTGCCAATTTCTCTAGTCTCATGGCTTTGCAACAGCAAATGTTGAATGGCGCTCAGGATTTAACATTGGCTGGCGATGAAAAACCCAAAGAGGTTGGTTCTAAAGTTAATGGTCAACGTCCTTCCTTTGAGGGTTCTCAGAATTCTCTCAGCAATCATGGACAAACCACACCCAATGCCAAAGATTCTAGCTCCAGCGAAGTGGAAAGACTTTATCCTGGTATGGTGAAATCGGAACAGGGAAATAAGACTCCAGCTCCTTTGGCCTCTAGCAATAATTCTACCACCAATACCAACTCAGCAGCTCCCAGTCCTCTCAGCAATTCCATACTCCCGCCTGCTATGACACCCAATGAGGAATTCTCCGCCACCGCCAGTCCTCTTCAGAGAATGGCCTCCATAACCAATTCCTTGATAACCCAGCCACCCGTACCACCTCATCATAATCCTCCTCAAAGACCCACTAAAGCCGTCTTGCCTCCCATAACCCAACAACAATTCGATATGTTCAACAATCTTAACACTGAGGATATAGTGCGCCGTGTTAAAGAAGCTTTATCTCAGTATTCTATATCCCAGCGTTTGTTTGGTGAATCCGTGTTGGGTTTGTCTCAAGGTTCTGTTTCCGATTTATTGGCTAGACCAAAACCTTGGCACATGCTCACCCAAAAGGGTCGTGAACCTTTTATACGAATGAAAATGTTCTTGGAAGATGAAAATGCAGTCCACAAATTGGTGGCTTCACAATACAAAATTGCTCCCGAGAAATTGATGCGTACCGGCAATTACAGTGGTTCTCCCCAGATACCTCAGGGATTGGCCAATAAAATGCAAGCTTCCCTGCCCATGCAGAAAATGATGAGTGAATTGAAGTTGCAAGAACCAGCCCATATTATGCAACAAATGCAAGCTGCAGCTGTTATGTCTGCTGCTatgcaacaacatcaacagcacCAGGCGGCCCAAGCTGCCCAACAAAGCCAGCAACAAGCAGCTCAAGCCGCAGTACAGGCAGCACAGGCTGCTGCCGCCGCCCAGGCCGCACAGCAGCATCATCAAAGCATGCTCTTGACTTCGCCCGGTTTGCCGCCCCAGCATACCATAGCCCTGCCCGCCGCCGCCAATTCTCAGCCTTCTTCTGGTTCTAATACACCAGCTGGCCCCTCTAGCGACAAGAAACCCATGATGATGCCCATACACTCACCCCACCAAGGCAACGCCATGCGTAATATGCATCAGCATATGTCACCCACCGTTTATGAAATGGCCGCCTTAACACAAGATCTAGACACTCaggttatcaccactaaaatcAAAGAGGCCCTGCTCACCAACAACATTGGACAAAAAATCTTTGGTGAAGCAGTCTTGGGCTTGTCTCAAGGTTCCGTCTCTGAATTGTTGAGCAAACCTAAACCCTGGCATATGTTGTCGATTAAAGGACGAGAACCCTTCATACGCATGCAGTTGTGGTTATCGGATGCCAATAATGTTGAACGTTTGCAGGTATTGAAAAATGAACGCCGTGAAGCCTCCAAGAGACGTCGTTCTACCGGACCCAATCAACAAGACAACAGCTCAGATACTTCCAGCAATGATACCAATGATTTCTACACCAGCAGTCCGGGACCCGGCAGTGTAGGCAGTTCGGGAGCTCCTCCTAACAAAAAGCAAAGAGTTTTGTTCTCGGAGGAACAAAAAGAAGCCTTAAGACTAGCCTTTGCCTTAGATCCGTATCCCAATGTGGGCACCATTGAATTCTTGGCCAATGAATTGGGTTTGGCCACACGCACCATAACCAATTGGTTCCACAATCATCGTATGCGTTTGAAACAACAAGTGCCTCATGGGCCACCTGGTCAGGAAACCAATATACCCACTAGAGAAAATACCAATTCCACACCCTTCGATCCCGTCCAGTTTCGCATTTTATTGCAACAGCGTTTGCTAGAATTACACAAAGAACGTATGGGTCTGGGAGCTAATGCCCCTCTACCCTATCCACCATACTTTGCGGCGGCCGCTTTATTGGGACGTTCTTTGGCCGGCATGCCAGGCACTAATCCCCAAACTAATTTGCCCACCAATGAGGCTGAACTTAGGGCTCTAAATCAAGCCTTTAGAGAACAAATGTCGGGCTTGGATTTATCCATGAGTTCTTTGAAACGTGAACGTACAGATGATTTCGAAGATGATATGGACGAAAGTCATATGTCCGAAAATGAAAATGAGGATTTAGATGATGAAGACAAAACAAGTGAATATCGAAATTCAGCTTTGGCCAGCATGAATGCCCAACAGTTTTTGAATAACATGAGATCGAATAGAAGAAAACCGGCAGCACCACAATGGGTTAATCCAGCAGTACCTGCCAGTGGGGATAACAGTGAACGTATTATTAATGGAGTATGTGTTATGCAAGGAGCTGAGGgcgaacaacagcaacagcaaggACAATCAGGAAATCATGAAGAAGAAGTTCATCATCAAACTCAACCAGATAATGAGGATATGATGGAGGCACCTCACCAATCTGTTATGGAGCCAGAGGTGGtcattaaacaagaaaaagaagacTGTGAAAGTGATAGTGAAAAGGTAAACAATGACGATTTAGCCGGCAATGAGGAAAGAATCAAAGTGGTACAAGAGGATAAGCTAAGAATGGTGCGTGTCAATCGTTTGAGTCATGAAGAGGAAACGGCCAGTTCTAAAAGTGCAACAGCAGGAAACACAAATCCAGCGTGGAATTATTAA
- Protein Sequence
- MKAKGYFLCSKTETTKAIKSYKCEYPLTLWLSALSKTGWQIRATLAEKEVNTLKEQLSTNTDSNSDNTTNNGDLSLATSTANNNAESNTTTTNEDVEEVLNSEIPPNKLLSPAFNNNNTKLLNSVAAAITLHQNGGNLLATTPSPSPPLSESHLNLSGSQEEQEQQLNGCLNPKLFFNHAQQVMMMEAAAAAAAAAAAAAAVQQQQSPMHSPQPAAAGQQQEQDNEALLAKPTNTKEINDNFDALKLSDTQKSLSDSKEQNSITTPSTTENDNLSKDPEREEIEEALRAENNTNNNNNNNNINSFNSDNNKNSLNSPKQNSLLENKSTTAEIEEQEQEQKEPQQHHMDVTEELRGNLLDNNNEMKNNHMDLLAAKDKEIKALFEEVKRLRSIEQTHLIQIHRLEEHLEAKRQHILRLESKLDKQQINEALLETSLEQRTSSSSSAALDATNNTSKDCEIVESKEKSLTETLTINEDEDEDDEVQEINTKEKNCDLLRDNDKVRDEDDMEDDMEESKENKQNAENMEEDEEECTKDELKEIQIKKETQSPLSLDSISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAEALKNTEDSNIILPEEDKVIQSLDSLNNINSSESAPPANEDLQNASSLSLEAGKVPKIEILDDDDDDDEEVLEIKRLENSHEKSLEEECDPSNSNFKQNVERFGSLLGEELVNSYWRQGFESSKSLYNTRYPSANQTPTPCSQQMQITTSHQVHQLITPTNMHHASTLQQQQQQHHHQPHLHQHQQQQPLQTHLTAGSSCGPSSTTLLSQLVNSTFSNNNNNNNSNIITTQTSSSSSSLRSADGFSHTQTGSAHHHHLSAHHPLQHHAQLHHQLPHHLAEQHEKSSLERHHDSSASSASTPNLQDQQRHQDEHHSLSLNGSLKNLEDNNNSLCGTPTSHHMSGAHSAHLPHGFLPGLPFQFQERGHFRFADDLQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGSGAGGRDDSMSDERIAHILNEASSLIKSSAAAGASALHPSQQQQHEHQRRSSTIAEDSRSNDDSKSPHQPCSSPFFKDHLSKSQSESVLSAPGHLRGDDMNPEKMARLYQELMARAPREAFPGGGLPSTAGFPGLAADDNMRLAFEREMSKLQQQQQQQHQAANQPANFANFSSLMALQQQMLNGAQDLTLAGDEKPKEVGSKVNGQRPSFEGSQNSLSNHGQTTPNAKDSSSSEVERLYPGMVKSEQGNKTPAPLASSNNSTTNTNSAAPSPLSNSILPPAMTPNEEFSATASPLQRMASITNSLITQPPVPPHHNPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGLANKMQASLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQHQAAQAAQQSQQQAAQAAVQAAQAAAAAQAAQQHHQSMLLTSPGLPPQHTIALPAAANSQPSSGSNTPAGPSSDKKPMMMPIHSPHQGNAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLELHKERMGLGANAPLPYPPYFAAAALLGRSLAGMPGTNPQTNLPTNEAELRALNQAFREQMSGLDLSMSSLKRERTDDFEDDMDESHMSENENEDLDDEDKTSEYRNSALASMNAQQFLNNMRSNRRKPAAPQWVNPAVPASGDNSERIINGVCVMQGAEGEQQQQQGQSGNHEEEVHHQTQPDNEDMMEAPHQSVMEPEVVIKQEKEDCESDSEKVNNDDLAGNEERIKVVQEDKLRMVRVNRLSHEEETASSKSATAGNTNPAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00350072;
- 90% Identity
- iTF_00350072;
- 80% Identity
- iTF_00350072;