Chom016387.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- kn
- Assembly
- GCA_004302925.1
- Location
- PYHX01002045.1:418338-455792[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-91 5.1e-87 292.4 0.0 10 181 81 240 72 240 0.95
Sequence Information
- Coding Sequence
- ATGATTTCTTTGCTGCCACTGATACTCTACTATCATCCTCTAAAGGTAGATGATGCCAATGGTATTGATGACAAGAGTAATAATGCTGTGCCGGGTTTTAGCTCGGCTTCACCCTGGCCAACGCTAGATTTAGAATGGGGTAGAAAATTATATCCAACCGCCGCTCCTCGTTCAGCGGGCGGCTTAATGTTCGGTTTGCCACCAACTGCTGCGGATATGAATCAACCACGGGGACCCATGACTTCGTTGAAAGAAGAACCTCTGGGAGCTCGAGCCTGGATGCAGCCCGTTGTCGATCAAACCAATTTGGGTATTGGACGGGCACATTTTGAAAAGCAGCCTCCCAGCAATttgagaaaatcaaatttttttcattttgttattgcTTTATATGATCGTGCAGGTCAACCCATTGAAATCGAAAGGACTGCATTTATAGGTTTCattgaaaaagaatctgaagcggatacaacaaaaacaaataatggcATACAATATCGTTTACAACTGTTATATGCAAATGGTGCTCGCCAGGAACAGGATATATTCGTAAGACTTATAGACTCCGTCACAAAACAAGCAATTATCTATGAAGGACAAGATAAAAATCCTGAAATGTGTCGTGTCTTATTAACCCATGAAGTTATGTGCAGCCGCTGTTGTGACAAAAAAAGTTGTGGAAACCGCAATGAAACACCATCAGATCCTGTCATTATTGATCG
- Protein Sequence
- MISLLPLILYYHPLKVDDANGIDDKSNNAVPGFSSASPWPTLDLEWGRKLYPTAAPRSAGGLMFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKESEADTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118478;
- 90% Identity
- iTF_00889914;
- 80% Identity
- iTF_01260780;