Chom015945.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- osa
- Assembly
- GCA_004302925.1
- Location
- PYHX01002335.1:699275-709734[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3 9.2e+03 -3.0 0.1 14 46 300 330 296 331 0.80 2 2 9.2e-25 2.6e-21 75.7 0.0 3 89 557 643 555 643 0.92
Sequence Information
- Coding Sequence
- atgaataaagttttaccctgggaacattttgaaaatctatataaagaACTAATAGGTCAAAATAGTAACGATAGTTCTAGTGGTGGTGGCCATAGTGGTTTAGGCTCTGGCCCACCTGGTACACCAAATCCCCAACAAGTTATGCGTCCCACACCTTCACCCACAGGTTCTTCGGGTTCACGTTCTATGTCTCCAGCAGTGGcACAAAATCATCCTATATCGCGACCCTCTAGTAATCAATCTAGTAGTGGTCCTATGCAACAACCTGGAGGTGGTCCTCCTGGTCCTCCATCTCAACAAACATCGCAACAACAGCAATCTCAACAAGGTCCTGGAGTTCCAAACTCCTCTTCTTCGGCGAGTAATTCACCACAACAGCAGGGACCTCCTAGTGGTGCATCCGGAGGTCCACCCGGCTCTCAGCAGCAGCCACCACCGCCACCAAATCAAAATGTCAATAATCTGCCCTCCCAGCCGTTGCCACCTCAGGGTCCAGGTGGTCCTGGTGGTTATCCCTTACCGCCTCATATGCATGGCAGCTATAAAATGGGTGGTCAAAGTCCTGGTCCTCAAGGTATGTTATCGGGTTATCCGCCACCTCCTCAGCAAGCTCAACAATACTCTCAAGGAAGCTATCCACCACGACCGCAATATCCGCCCGGTGGTTATACACCAACACCACCTCCGTCAAGCCAAGCATCTGGTGCTAATAGTATGCCTCCAGGCAGTGGTCCACAACAGTATCCAGGTGGTCGTCCTATGCCCAATCATAGTGGTCCTGGTCAATATCCACCTTATCAAAATTGGGTACCACCCTCTCCCCAACAAGGTGTTCCAGGTGGTCCTCCTCCTGGTGGTCCCGGGGCTCCAGGTGCCGGTTCTATGGGTAATCATGTGCAGGGCAAAGGTACACCACCTCCTCCCCAGGGAAGTGGCTCTCCACGACCCCTCAATTATCTAAAACAACATTTGCAACATAAAGGCGGTTATCCAGGTGGTCCTGGCGGTCCTCCTCAGGGCTATGGCAATGGTCCTGGTATGCATCCCGGTATGCCAATGGGACCACCACATCACATGGGTCCACCACATGGTCCTACCACCATGGGTCCACCTCCATCTACACCACCACAATCTATGATGGTTGGTGCCGGTGGAGATAGTGGTAGCAGTGCAGGTGGTCCTCCACCTCCAGATCATATATCACAGGATAATGGTTTAAGTTCAAGCTCATCAAGTTCGGCCCCAGGAGGACCACCACATCCCGTAACTTCAGTAGTAACTACAGGACCAGATGGTGCTCCAATGGATGAAGCAAGTCAGCAGAGTACAATATCAAATGCATCAGCggcttcaGCCGAAGATCCACAATGTACTACACCAAAATCGCGCAAAAATGATCCTTATGGCCAAAGTCATTTGGCTCCACCTAGCACTTCACCCGGTGGCATAGGAGCTGGACCACATCCAGGTCATCCCGGTGAAGATTATGAAATGAATTCACCACCCAATTGGGTTAGAACACCAGCCAGTCCGggTTTCAATAGTCATGTTCCTCAGCCAGATAGTTTCCGTACAACGGCCACACCTGTAACCACTGTTGTCTCAGCGTCTGCGAAGAAATCCGATAGTCTATGTAAACTTTATGAAATGGATGATAATCCAGATCGCCGTGGTTGGTTAGATAAATTACGAGCCTTTATGGATGAGAGACGTACTCCAATAACAGCCTGTCCAACCATCTCGAAACAGCCGCTCGATCTTTATCGTTTATATTTGTACGTTAAAGAACGAGGCGGATTCGTCGAGGTATGCAAGgtTACAAAGAGTAAAACCTGGAAAGATATTGCTGGTCTATTGGGTATTGGTGCCAGCAGTAGTGCTGCGTATACGTTACGTAAACATTACACAAAAAATCTATTGGCATTTGAATGCCATTTTGACCGTGGTGATATAGATCCATTGCCTATAATACAACAAGTAGAGGCTGgtacaaagaaaaaatcaacCAAAGCAGCTTCAGTACCATCACCagCTGGTTCATCAAATTCACAAGATTCATTCCCAGCCCCTGGTGGTGCTGCTAATACATCTATGGATGGCTATCCACAATATCCTGGTAGTTATCCCGGTGGTCCGGGTCCTCAGCCAGATTATGGTGCAGCTGGTCAAATGCCCAGACCACCATCACAAAGTAATGCGCAAAGTCCACATCCagGTTCTCCATATCCTGGACAACCTGGAGCTTATGGCCAATATGGTTCAGGTGATCAATACAATGCAACAGGGCCTCCTGGCCAATTTGGGCAACAGCAAGGCCAATTTCCACCCCAAAATCGTAACATGTACCCTCCCTATGGACCCGAGGGGGAAGCGCCTCCGTCGGGCTCAAATCAATATGGTCCTTATGGAAATCGTCCATATAGCCAGCCACCACCTGGTGGTCCTCAGACTCCTACTCCTCCTGGTGCTCCTACTGCTGCGGGTGGTCCACCAACAAGTGGTCCTCCAGCCCCTGGTAGCTCACCATATCCCCCTCCTGGTGCTCCTGGTCAACAAGAATATTATAGGCCACCAGATCagGGACCTCAGCCACGTCGTCATCCAGATTTTGTTAAAGACTCTCAGCCCTACCCTGGCTATAATGCACGACCACAGCTTTACGGTGGGTGGCAAGGTGGTGCGAATCAATATCGTAATCAATATCCTTCATCACCCTCTCCTCAGGCTTGGGGTGGTGCTCCGCCACGAACATCAGCTCCACCATCAGGACCTCTGGGTCCTCCTGGTCAACAACAACCTCCCGCAGCTGGTGCTTCACAATGGGATCAACACCGTTATCCGccacaacagcaacagcagcccCCACCTccgcaacaacaacagcagcagcaacaacagcagcaacagcccCAACCACCctatcagcagcagcaacaacagcaacagggACCCCAACAGCCGACGCCACCCCAATGGGCTCAAATGGGTGGAGCTGGCACTGGCGCACCTGGAGCACCACCAAGTGGAGCGCCAGGATCTCCTTTAAGGCCTCCCAGTGCTGGTCAACAACAACGTATGCCTACGACCGGTCCCGGCGGTGCTATGAATGTGGGCGTACCACCTGGTGTGGTTCCTCAAAGTGGTGGACCACCAGGAGCTCCTCCCAACACCAGTACTGCTCCTAGTGGTAGTGTAACAATGCCACCTGGCAGCATGGGTAAACCACCTTTCTCTATGCCACCACCACCACAGTCTAGTGGCGGTAGTTCCAATATTGTAGCACCCCCAGGAAATTCTCAAGGTCCTGCAGTTCCAGGCATTATGCCTCCGGGTGTAATGGGTTCTCAACAAAAATCTTTGGGTGTTCCCGTAGCTGGTGCAGCCAGTGTACCACTACAACCTCAACCTCCCCAGCAGCAGCCGCCACAACCTTTCGTTCCTCCAGCTGCTCAATtgattaaaaaggaaattgtttttCCACCCGACAGTGTGGAGGCCACCACACCCGTGTTATATAAACGTAAACGCTTAAATAAGGCTGATGTTTGTCCCGTTGATCCGTGGCGTTTATTTATGGCCATGCGTTCGGGACTTTTAACTGAATGTACTTGGGCTTTGGATGTGCTAAATGTACTACTGTTCGATGATTCCACAGTACAATATTTTGGTTTGTCCCACTTGCCCGGTTTGTTGACTCTGCTGCTAGAGCATTTCCAAAGGAATCTCGCTGACATGTTCAACGATGAAGACAACAATGAGAAACACctaaaaaattctgttaaaacaGCTAAAAAAGTCAATGACAAACGCACCTGTGCAAAACTTAGACCCTCATCGCGACAACATGACACAAGTTCGGCTTCAGATTTAGTCATGGAAAACGATCGTCTCTTTGCTGATGATGTTGATGGTCGTGATGACTCGGACGATGAAGATGAGGGCATTGATTTGGGTCAAGTAAAACATTTGGCTAATCCTGATGAGCGTGTGATATTACTGGCTCATACACCCAACTATACAATGATGTCACGCAAAGGTTTGCCCGTAAGACTACAGCCTGCCGAACAAGATATTTTCATAACGGATGGTCTCAAGTCATGGGATACTGAATATAGTGGTAACTATGAGGAGACTGCTCCTGTTGGCAGCAATGCCTGGACTTATGGCTTTACCGATCCAGACATAAATGCGGGCATTATTGATGTGTTCAAGTCAGAATTTGTAGACATTCCATTTGCCCGTTACATCAAAGGCACTAATAAATCCAAAACTAAAGACAACAAGAGTACGAAGCAAATAAAAACGGAAGATAAAGAGGAGCAACCACAACATGAATTAAAACAGTCCAAATTGGAACCCCAAGAGGCAAGTGATAAAGAAAATCAAACAGCTCAAGCATTAGCAAATGCCCAGCTAGAAGATGATGATGAGGTTGAAGCTAGACTGCAACAGAATACGTTTAATAAGAAACGAAGACTTTTTAATAACTCCGTTTTGAATGCCAACTCCAATGCCAGCCTTAATAGCAGCAATAGCAACAGTGAACTAACGGCTGGTGATACGCAAAGTTTAGAACCGAGTGAAgctaagaaaacaaaattggaAGAACAAACTGAAATTAAGCGGGAAGATGACACTGAAATGTTAGCAGCTACAGCACCCTCGGACAGTGATTGTCGAGAGGTGGATATGGAATTGGAAACAATAACCACCAAAGACACGGCTACGACAAAGTCACAACCACCTCCACAATTCGATCCCAAGTCAACAATAAGGGATCCTGCTTTAGTGCTGCAACGCCGTCGTTCTGCTTCTTCTCTCGAAGATGAATGTTATACCCGCGATGAGTCTAGTTTGTATTTGGTCAACGAAAGCCAGGATTCTTTGGCCCGCCGTTGCATTTGCATTTCAAATATATTCCGCAATTTGAGTTTTGTACCCGGCAACGAATCTATTTTGGCAAAATCCTCCAGATTCTTGGCTGTGTTAGGACGTTTATTACTACTCAATCATGAACATTTGCCTCGAGCTCCCAAAAATCGCAATTACGATCGCAGTACAGAGGAGGATATGGATTTTTCAGATTCATGCAGTTCTCTGCAAGGAGAACGCGAATGGTGGTGGGAATATTTAATTAGCATACGTGAAAATATGCTGGTAATAATGGCCAACATTGCTGGTCATTTAGATCTTTCACGCTACGAAGAACTGATAGCCCGGCCGCTAATCGATGGCCTCTTACATTGGGCTGTGTGTCCCAGTGCTCACGGTCAGGATCCTTTTCCATCTTGTGGCCCATCTTCCTCTCTATCACCCCAAAGACTTGCCCTGGAGGCTCTCTGTAAGTTGTGTGTTACCGACAATAATGTCGACTTAGTGATTGCCACACCACCCCACTCTCGACTGGAAAAACTGTGTGCTGTACTAACTCGACATTTATGCCGCAACGAAGATCAAGTCCTTCGGGAATTTTCGGTGAATCTCTTGCATTATTTGGCAGCTGCCGACAGTGCAATGGCCCGAACAGTGGCTTTGCAATCACCTTGCATTTCCTACTTGGTAGCCTTTATTGAGCAAGCCGAACAAACCGCATTGGGGGTAGCCAATCAGCATGGCATTAATTATTTGCGTGAAAATCCCGATTCAATGGGAACTAGTTTAGATATGTTGAGACGAGCAGCCGGTACTCTGTTGCATTTAGCCAAACATCCCGACAACCGATCTCTATTCATGCAACAGGAACAAAGACTTTTGGGTCTGGTCATGTCTCACATACTTGATCAACAAGTGGCTTTGATAATATCGCGAGTACTATTCCAAGTATCACGAGGAGCAGGAACTAGTGCCAATTCTCTCGAATATAGACTGCAACAGAAACAATTGCAGCAAAAAATGCTAGAGACACAAGCAAATGAGAAGAAAACACAGGAATTAGGTTTAACCCACTCAGCGTCCGCGAGCTCAATGACAAGCATATCAGCAGCGAACAAAGACTCGAATAATAGTGCAACGGACGTGAAATTAGAAGCTGGCAAAACGGAGGCTCAAGATGTCAACTCAGAGACGAGTAATACTGAGGCGGCAGCCAATAACGCTACAAATGCAGCTGAAAGTAGTCATGCCGTAGCTGCTGCAGAAGCAAACATAAGCCACAATAATAAAGCTTCAAGCTCCTCCATGATTATGTCGGCGGATGAGAATAGTAATAGCAGTTCACAAATAACACCATCGGCTGCCTTCAATGATGTCAGCAACAGTAGTACAAATAGCAATAGTTGTGGTACAGCAGCTAGTTCACACACACCGCCACCACCACCCACAGCAACAGCACCATCACAAGCTCCAACTGCAAATACCTCAACGACAGCAGCGGTTGCGTAG
- Protein Sequence
- MNKVLPWEHFENLYKELIGQNSNDSSSGGGHSGLGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPSSNQSSSGPMQQPGGGPPGPPSQQTSQQQQSQQGPGVPNSSSSASNSPQQQGPPSGASGGPPGSQQQPPPPPNQNVNNLPSQPLPPQGPGGPGGYPLPPHMHGSYKMGGQSPGPQGMLSGYPPPPQQAQQYSQGSYPPRPQYPPGGYTPTPPPSSQASGANSMPPGSGPQQYPGGRPMPNHSGPGQYPPYQNWVPPSPQQGVPGGPPPGGPGAPGAGSMGNHVQGKGTPPPPQGSGSPRPLNYLKQHLQHKGGYPGGPGGPPQGYGNGPGMHPGMPMGPPHHMGPPHGPTTMGPPPSTPPQSMMVGAGGDSGSSAGGPPPPDHISQDNGLSSSSSSSAPGGPPHPVTSVVTTGPDGAPMDEASQQSTISNASAASAEDPQCTTPKSRKNDPYGQSHLAPPSTSPGGIGAGPHPGHPGEDYEMNSPPNWVRTPASPGFNSHVPQPDSFRTTATPVTTVVSASAKKSDSLCKLYEMDDNPDRRGWLDKLRAFMDERRTPITACPTISKQPLDLYRLYLYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGTKKKSTKAASVPSPAGSSNSQDSFPAPGGAANTSMDGYPQYPGSYPGGPGPQPDYGAAGQMPRPPSQSNAQSPHPGSPYPGQPGAYGQYGSGDQYNATGPPGQFGQQQGQFPPQNRNMYPPYGPEGEAPPSGSNQYGPYGNRPYSQPPPGGPQTPTPPGAPTAAGGPPTSGPPAPGSSPYPPPGAPGQQEYYRPPDQGPQPRRHPDFVKDSQPYPGYNARPQLYGGWQGGANQYRNQYPSSPSPQAWGGAPPRTSAPPSGPLGPPGQQQPPAAGASQWDQHRYPPQQQQQPPPPQQQQQQQQQQQQPQPPYQQQQQQQQGPQQPTPPQWAQMGGAGTGAPGAPPSGAPGSPLRPPSAGQQQRMPTTGPGGAMNVGVPPGVVPQSGGPPGAPPNTSTAPSGSVTMPPGSMGKPPFSMPPPPQSSGGSSNIVAPPGNSQGPAVPGIMPPGVMGSQQKSLGVPVAGAASVPLQPQPPQQQPPQPFVPPAAQLIKKEIVFPPDSVEATTPVLYKRKRLNKADVCPVDPWRLFMAMRSGLLTECTWALDVLNVLLFDDSTVQYFGLSHLPGLLTLLLEHFQRNLADMFNDEDNNEKHLKNSVKTAKKVNDKRTCAKLRPSSRQHDTSSASDLVMENDRLFADDVDGRDDSDDEDEGIDLGQVKHLANPDERVILLAHTPNYTMMSRKGLPVRLQPAEQDIFITDGLKSWDTEYSGNYEETAPVGSNAWTYGFTDPDINAGIIDVFKSEFVDIPFARYIKGTNKSKTKDNKSTKQIKTEDKEEQPQHELKQSKLEPQEASDKENQTAQALANAQLEDDDEVEARLQQNTFNKKRRLFNNSVLNANSNASLNSSNSNSELTAGDTQSLEPSEAKKTKLEEQTEIKREDDTEMLAATAPSDSDCREVDMELETITTKDTATTKSQPPPQFDPKSTIRDPALVLQRRRSASSLEDECYTRDESSLYLVNESQDSLARRCICISNIFRNLSFVPGNESILAKSSRFLAVLGRLLLLNHEHLPRAPKNRNYDRSTEEDMDFSDSCSSLQGEREWWWEYLISIRENMLVIMANIAGHLDLSRYEELIARPLIDGLLHWAVCPSAHGQDPFPSCGPSSSLSPQRLALEALCKLCVTDNNVDLVIATPPHSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLFQVSRGAGTSANSLEYRLQQKQLQQKMLETQANEKKTQELGLTHSASASSMTSISAANKDSNNSATDVKLEAGKTEAQDVNSETSNTEAAANNATNAAESSHAVAAAEANISHNNKASSSSMIMSADENSNSSSQITPSAAFNDVSNSSTNSNSCGTAASSHTPPPPPTATAPSQAPTANTSTTAAVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01176721;
- 90% Identity
- -
- 80% Identity
- -