Chom009767.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- TFCP2
- Assembly
- GCA_004302925.1
- Location
- PYHX01000578.1:249685-277412[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 8.6e+03 -4.3 1.3 102 162 50 108 39 111 0.47 2 3 3.3e-53 2.8e-49 167.3 0.2 17 185 385 550 373 561 0.91 3 3 1e-13 8.5e-10 38.2 0.7 187 222 593 628 585 629 0.91
Sequence Information
- Coding Sequence
- ATGGCTCTATCGCTGGTGGCTACACTACCTTCACATAATCAATCTAATTATTACGATTTACCTTCATTTTTGGATCCTTATGTTTTGGAACATCAAAGTGATCCTCAGTCCACAACAGTTTGTAATCAATTAGCCAATAGTAACAGTCATCATcaccagcagcagcaacaacaacaacaattgttgcCACGTTCCTCGAAAatctatttaacaaatttcaataataacacGAACAGCGCTTTAATGgagttaaataataataataatcacaataatacaaataatatacaGATATCTGGTAATCTACAACagatttcaacaaatatttcacAGCTTTCAAATACAACAAATCGCAATTTAATGAATGGTTTTCATCATCAGCATTTTGGTGCAGAATATGAACCAGTTATAACATTTGTTGATTCACCACCCAATTCTGAAGAATCTTGGCCGGACGATCAATCGAAAGGTTCTCCGGGTCCACAAATAATAGATGTCCAAACCATATACTCAAATAGTGGTTCACGTAAAAGACGAATGGATTGGGATCCATTAGAAATAGGTCAGAGTGAAAGCCCTGCTTCAGCACAAACTGGCGAATTGTCAGCAAAAATTTCAGCACAACAATTATTAgataaagagaaatataaaaaggaaagaTTAAATACGgGTCGTGGTACTTGGGGCGATGATATAGGATTCGATTTAAATGCTGAGTTCAATAGTAACTCATATTTGAATAATGAATCCTTTATGACTTTTGCTTCCGGCTTACCAGCCGCCCTCAAACAAGAACCTCAAAGTGATCaattgaaaatcaataaaaattccttaaacatTCATCAAGATCCGGGTAACATAAGTATTTCCACAAAAAACGATAAATCTCCTCTGCAACCATCAACAATATCTGCACCAACATCAGTAGCAGCTGCTGCAGCACAATCTGCCACTGGACATATTGAACAGTCGTCAGGCGAAAagcttaataaaaatgatataattgAGAATCATTGTATTTTGgaacaaaattcaaatacaaataaagtcaATAATCTCAATAACGAACAGGcaCGCAATAATTCTATGCCTCCACATCACCAACTTTTAACAGTTGTTGATGCAAGTAAAATTGAGCAAATACCCGGAGTACGTGATATATCAAGCACATCAAATTCTGATGATTACAAatttcaatatatattggCGGCTGCCACATCGATAGCTACTAAAAATAATGAAGATACCTTAACCTATTTAAATCAGGGACAAAGTTATGAaatcaaattgaagaaaattggtGATCTCTCATTATACAGAGATAAAATATTGAAgaGCGTCATAAAAATATGCTTCCACGAGCGTCGTCTTCAATATATGGAACGTGAACAAATGCAACAATGGCAAGCCTCACGTCCCGGTGAACGTATTATTGAAGTTGATTTACCCTTATCCTATGGTTTGTGTCATGTATCACAGCCTTTGaatccaaattatttaaatactgtGGAAATTTTATGGGATCCCATGAAAGAGGTGGgagtttatattaaagttaattgCATATCAACAGAGTTTACACCTAAGAAACACGGCGGCGAAAAGGGTGTACCATTTCGTTTACAAATCGAAACTTATGTTGAAAGTTCAAATAATACCAACAATAATACAGTATCTGCGGGTAATAAATCACCTTTGGGTCTACAAGCGGCTGCAGCTTCACCAACACAAGCTGGTAATTTAACACCAAATAGTTCAATATTAAGTTTAGCAGCCGCAAAACAAGTTATTCATGCAGCAGCTTGTCAAATAAAGgttttcaaattaaaaggaGCTGATCGCAAACACAAACAAGATcgtgaaaaaatccaaaaacgtCCACAATCGGAACAAGATAAATTTCAACCCAGCTACGAGTGTACTATTATGACAGATATACCGTTGGATTTAATAACACCATCAGCTAATAACAATACAAATGGTTGTTTTAGTCCAGAGTACATGAAAATTTGGCCAAATTCCCCAGTTCATATGCCAAAATATGATGGTATAATACCATTTAATGGTGCCTCACCAAATGCCAATAATGCTAGTCCAATAGCCATAAATAGTGTTAGCTCAACAAATTCTACAAATCTTAAGATAATGGATCCAAATAGTCTGGTCACAACACCAGCCATGGTTAACGATATCGATGAATAtaattcCATTACCATAATGCCTGAATCGACACCGGCTCAAGTAACACAATGGTTGACATATCATCGTTTAACAACGTATCTATCAACATTTGCCCATTTTTCAGGAGCCGATATTATGAGaatgTCTAAAGaagatttaattcaaatttgtgGTCTTGCCGATGGTATTCgcatgtttaatattttaagagtcAAATCCATAACGCCACGTTTAACAATTTACATTAGTTTAGATGGAAATAACTATAATGCCGTATATCTAATCTCTAATACATCGAAAGAACTATTACAAAAACTCTTTAAACTTCCGggattttatgaaattgttgCAAAAAGCTCTTCTACTCACAATGGCAACAATCCATCgggtaacaataacaacaataatatgatgGATAATTCATCACCATTCCATAGTTGGGGTAACATACAATCAAAATATTCGGGTAGCGGTTCAAATATATACAATGAAGTCAATAGTAAAAGTTTGGTGTATGTAACTGGACCAGCTGGTATCCATGTGGCCGTTACCGATGAAGTTCTAAATAATGAAATACGTGATGGAAGTCTTTATGGTCTGGAAGTACAAAATGGAAAagttattatgaaattaaaaaataaaaatgaaatttaa
- Protein Sequence
- MALSLVATLPSHNQSNYYDLPSFLDPYVLEHQSDPQSTTVCNQLANSNSHHHQQQQQQQQLLPRSSKIYLTNFNNNTNSALMELNNNNNHNNTNNIQISGNLQQISTNISQLSNTTNRNLMNGFHHQHFGAEYEPVITFVDSPPNSEESWPDDQSKGSPGPQIIDVQTIYSNSGSRKRRMDWDPLEIGQSESPASAQTGELSAKISAQQLLDKEKYKKERLNTGRGTWGDDIGFDLNAEFNSNSYLNNESFMTFASGLPAALKQEPQSDQLKINKNSLNIHQDPGNISISTKNDKSPLQPSTISAPTSVAAAAAQSATGHIEQSSGEKLNKNDIIENHCILEQNSNTNKVNNLNNEQARNNSMPPHHQLLTVVDASKIEQIPGVRDISSTSNSDDYKFQYILAAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDLPLSYGLCHVSQPLNPNYLNTVEILWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYVESSNNTNNNTVSAGNKSPLGLQAAAASPTQAGNLTPNSSILSLAAAKQVIHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMTDIPLDLITPSANNNTNGCFSPEYMKIWPNSPVHMPKYDGIIPFNGASPNANNASPIAINSVSSTNSTNLKIMDPNSLVTTPAMVNDIDEYNSITIMPESTPAQVTQWLTYHRLTTYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRVKSITPRLTIYISLDGNNYNAVYLISNTSKELLQKLFKLPGFYEIVAKSSSTHNGNNPSGNNNNNNMMDNSSPFHSWGNIQSKYSGSGSNIYNEVNSKSLVYVTGPAGIHVAVTDEVLNNEIRDGSLYGLEVQNGKVIMKLKNKNEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01194134;
- 90% Identity
- -
- 80% Identity
- -