Chom003975.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- gt
- Assembly
- GCA_004302925.1
- Location
- PYHX01002425.1:71187-72653[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-13 9.2e-10 38.3 6.6 5 61 390 446 386 448 0.94
Sequence Information
- Coding Sequence
- ATGATGATTCACGAGAAATTAATGTCCGGCCAATTTTTACTGGATTTGAAAAATGATCGCTCTGGTTTACTACAAGCTGCCGCCGTGGctcatcatcaacaacagccTTTGCATCATTTACAACCTCCTTCTCCTCCCATGCCTGCTTTGGATATATACTCAGCCTATGCTTATCagcaacaattgcaacaacaattattaaacTCTGCTATGCCACATCATTTGCCAACAGCTCAAACTGCTGCCGCCGCTGTAGCAACTGCTCCTGAAGTTTTAGATCTCTCCAGACGTGATTCAGTAGAAACACCCCGTAAAACTCCTTCTCCTTATCAATCCACTGCTAGTTTTGGTTCTGGTTCTGGTTCACCAGCCGGCTCTCCCAATACTTTATTAGCTCAACAGCAGCATCAACAGCAAGCTGCTCTCTTGCCCGCCAATCTTTTATATGCTGCCCAGGCTCAAGCTCAACAACAAGGTCCAAATGTACAATTACCCGCAAATTTAGCTGCCCTCTATCCTGGTCTTTACTATCCAGCCACAGTTAAACAAGAACCCTTATCCACCACACCTCCACCCACCGTGCAAATACCACAACCAGCTCCCGCTGTTAACAATAACAATCTCTTGCAAACTTTTGCTTCTGCCGCTGCAGCTGCTGCTGCCGCTTCCTCTCTTAGACAAGATGTTCCAGAACCCCACTCACCTCAGCAAGCCCAAACAGCCACCACTACCAATGTCACCACTCCCACCAGCAGTACCAGCAATTTAGCTGCTTTAGATGCTAAAAATACCCGTCCCTTTAAAGCCTTCCCTCGTGATCCACTAGTCATTGCCGCCAACTTTGCTGCCACCGATGTCTTGCTCGATAATCCCCGGGTAGAACGCTACACTGAATATCGCAAACGTGTGCTCGAACAGATACGCACTTCCAATGGTGGTTCACGCACTGTTACCAATCCTAAAATGCGCCGCACTAACTCTGCCAGTGGCAGTATTCATGAGGGCTCCTCCAGCAATAACAGTGAAAATGATGAACGCCAACATGAAGAATCCAGTGATTGTGATTCCAATTCAGGAAATGATAACCAAACAGCCAATAATACTAAAACCTCGGAAACTACGCAAAATACAGTTTCCGCCTCTGGTGGCATCGTGAAAGATGCTGCCTATTATGAACGCCGTCGTAAAAATAATGCTGCTGCTAAAAAGTCCCGTGATCGTCGTCGCATCAAGGAAGATGAGATTGCCATTCGTGCTGCCTACTTGGAAAGACAAAATATTGAGCTGTTGTGTCAAATTGATGCTCTCAAAGCACAATTGGCTGCCTTAACCtcaaaaatgtcttaa
- Protein Sequence
- MMIHEKLMSGQFLLDLKNDRSGLLQAAAVAHHQQQPLHHLQPPSPPMPALDIYSAYAYQQQLQQQLLNSAMPHHLPTAQTAAAAVATAPEVLDLSRRDSVETPRKTPSPYQSTASFGSGSGSPAGSPNTLLAQQQHQQQAALLPANLLYAAQAQAQQQGPNVQLPANLAALYPGLYYPATVKQEPLSTTPPPTVQIPQPAPAVNNNNLLQTFASAAAAAAAASSLRQDVPEPHSPQQAQTATTTNVTTPTSSTSNLAALDAKNTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRTSNGGSRTVTNPKMRRTNSASGSIHEGSSSNNSENDERQHEESSDCDSNSGNDNQTANNTKTSETTQNTVSASGGIVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKAQLAALTSKMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01236414;
- 90% Identity
- -
- 80% Identity
- -