Chom006669.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- Nfil3
- Assembly
- GCA_004302925.1
- Location
- PYHX01002115.1:26652-33243[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-14 5.9e-11 42.1 3.3 2 55 292 345 291 353 0.93 2 2 0.49 5.5e+02 0.6 0.0 25 42 796 813 794 823 0.74
Sequence Information
- Coding Sequence
- atgtcGATTGTTTGTACTCTTGAACCAaaagtgaatttatttaaaggaCCTGTGGCAACCAAAAATTTACTTGTtctcaaaaataacattatcaataacaacaacagcagcagcaacaacaacaacaccaccaACAATAATCATAGTCTAAATAcggttaataataaaatatcaacaaattcaggcaataaaattataacggatacaaatattcaaaatttagcGAATAATTCACCAAAAGAGAAAACATTAACCGCTCAGTCCACAACACAAAATCCTAAAGCGAACGATTTTAAATCTCGTATATCCGTTACGGAATTTGTTAGACGTAATACAAATACAGTGGGATCACCTTTAACAATTAATACAAATACTGATCAAATagaactgcaacaacaacagcagcagcagcaacagcagcaacaacaatatcaccatcaacaacaacagcaacaaagacTAATAACGGCTGCAACAACAAATATGCCTGAAGTATTACATGCCGCCGCTGTTAGTAGTCTGAATCCAGGAAAATATCATCATCACAATAATCATCAAACACTAACACCGGTTTCAGCAGCCGCTGCAGCAGCCATGGCCATGAATACAGTGCGTATGTCCACCATATCCCCTACACTCTCCATTAATGGCAGTTCCAATGAAGCTACCAACAtgcACAGTCTTTCTATGTATAATGGTCCCGTGAGTCCACAGTCTAGTGATTCTGGTCATAGCATGTCTGATATGCACATTTCTCGTGATGGCAAATATGTCACTTTTAATGGTGAACATATGACGAAACAACAGGCTAATGCCgctaaagaattattttcacaaCGTAAACAACGGGAATTTACACCCGATTGTAAGAAAGATGATAGTTATTGGGATCGTCGTCGGCGTAATAACGAGGCCGCCAAGAGGAGTCGTGAGAAAAGACGTTACAATGATATGGTTTTGGAGCAACGTGTGGTGGAATTGACAAAAGAGAATCATGTTCTTAAGGCCCAACTGGATGCCatcaaagagaaatttaatatcTCTGGTGAAAATCTAGTGAGTGTTGAGCAGATATTGGCTTCTTTGCCCACCAGCGAACAGGTTTTGAGCATTACTAAGAGAGCTAAGATGACTACACCCGCTGCGGCGAatacacaaaataatttcaattcctCTAATGCCACTAATAATGGTTTACTCTATAGTTCCTCCCAAACACCTGCTTCTCTATTGCAACAAAAGGCCTCTAACGAAGTATTGAGTTCAACTAATGATAAGCTCTCACCACAAACAGTTATTAAGTCCAATGGTGGCTTAACATCAGCGTCAACATCACCTACTACTCCCTCATCCtcttcatcatcgtcatcagcTTTACATGTAGCCGCGGCTCATGTACCCAGCACAATGCAACCTACCGTCCAAACATCTCAAACTTTATATGCACCAACAAGCTCTGCAGCAGCAGCTGCTGGTCTTTATAATCCTGCTAATTTAAGTGTGAACATTTCATCAGCTTCACTCCCTCCACATCACATTGTAACAGCGGCCGCTTCCACCACTGTGCCCTCACAACCTCCCACAAACCTACAAAATTTACATGTCCTTCAAGCTCTCAATCGTCGCTGTGACTTGGATAACTTGCGTAAAGTTGTGGCAGTTGTAGATGCCATTAATACAAATGGCGATTTACCTTCGTCCGTGAGTGGTTTGTATACAAATGCTCAATCGGCTGCTCTTTATGCCGGTGCCGCTCAACATGTCAATCCACTCTACGCTcaatttaataaagaagaaCATGGTTATTTAACCACCAGCGATACCGCACCTGTCAGTTCTAATAACGGTGATTCGGTTACCTCCACCTCCGCCCGGGCCAATGCCAGTGTTTTGAATCTTTCAAGACGTGCCAGCACACCCACCAACTATGAAAATATGCTTTCTTCAACTACCTCCTCCTCAAGACTTTCCTCCATGTCATCCGCCTCCTCATCGGGTGCTGTATCCGGTGATGATGATCATGAAGCCGACAATGAAATGCCAGAAGAGTCCAATGAACACAATCTCGCCAGTACCACAACCAGTCCCCTAAGCACAGACTCGAACAATTGCTTGCCTTTGAAACTAAGACACAAATCCCATTTGGGTGATAAGGATGCAGCCGCTAATGCTTTGCTTGCCTTACAGCACATTAAACAAGAACCCATAAGTAATAGAGTCTCATCACCCACCTGGGCTGACAATTCTGGTGATAATAGTAGTGATGAACGAGATTCAGGTATCTCTATACCCAGTCCCGAATGGGCAGCACAATTTCAACGTAAAGTTTTAGTATCCGGCAAGGAGGCATGTACAGCCTCGGCGGTAGTAACAGTATCAGCCACCGAAAGAGAGCATATATTAAAATCACAATTGGCTAGATTAGAATCAGAGGTGGCCAATATTAAGAATATGATGATTTATACAGCTGATCAAAATTTGGTACAACAAGATCTTAAAATATAA
- Protein Sequence
- MSIVCTLEPKVNLFKGPVATKNLLVLKNNIINNNNSSSNNNNTTNNNHSLNTVNNKISTNSGNKIITDTNIQNLANNSPKEKTLTAQSTTQNPKANDFKSRISVTEFVRRNTNTVGSPLTINTNTDQIELQQQQQQQQQQQQQYHHQQQQQQRLITAATTNMPEVLHAAAVSSLNPGKYHHHNNHQTLTPVSAAAAAAMAMNTVRMSTISPTLSINGSSNEATNMHSLSMYNGPVSPQSSDSGHSMSDMHISRDGKYVTFNGEHMTKQQANAAKELFSQRKQREFTPDCKKDDSYWDRRRRNNEAAKRSREKRRYNDMVLEQRVVELTKENHVLKAQLDAIKEKFNISGENLVSVEQILASLPTSEQVLSITKRAKMTTPAAANTQNNFNSSNATNNGLLYSSSQTPASLLQQKASNEVLSSTNDKLSPQTVIKSNGGLTSASTSPTTPSSSSSSSSALHVAAAHVPSTMQPTVQTSQTLYAPTSSAAAAAGLYNPANLSVNISSASLPPHHIVTAAASTTVPSQPPTNLQNLHVLQALNRRCDLDNLRKVVAVVDAINTNGDLPSSVSGLYTNAQSAALYAGAAQHVNPLYAQFNKEEHGYLTTSDTAPVSSNNGDSVTSTSARANASVLNLSRRASTPTNYENMLSSTTSSSRLSSMSSASSSGAVSGDDDHEADNEMPEESNEHNLASTTTSPLSTDSNNCLPLKLRHKSHLGDKDAAANALLALQHIKQEPISNRVSSPTWADNSGDNSSDERDSGISIPSPEWAAQFQRKVLVSGKEACTASAVVTVSATEREHILKSQLARLESEVANIKNMMIYTADQNLVQQDLKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01176695;
- 90% Identity
- iTF_01194123;
- 80% Identity
- -