Chom016322.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- Tef
- Assembly
- GCA_004302925.1
- Location
- PYHX01002045.1:572287-573765[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-14 2.1e-11 43.6 6.8 1 61 142 202 142 205 0.97
Sequence Information
- Coding Sequence
- ATGAAaacaCCACGTGCATCTCCCATTCTAGATGTCATGGATAGTCCAACATTGGAACAATTTCCGTCGGAGTTAGAAAATACAGCAAATTGTTTAATACCGACAGAAACTCTGGTGACAAATAAAtcgcaaaatttcttaaagccttctattgaaattgaaactttACCAAAAGTTCATTTGAACGATAATGAACTTCGCTTAGCCAACCTAAACGTATTACCTCTGCCTGCAGGTCCTTCAACAACATTGCTCAATCATCAGGCAGCAACATTACCAGCGTTTGAATATTTAGCACCTGCTGTTCGTAATATTAGTCCAGTTGATTTGCCATTAATGGAATTAAATCGCGTGGGAGGAATATTTCCATCATTTTTACATCGGCGTCCTAGAGGAGAAAAACGTCCCATTCCTGAGGAgcaaaaagataataaatactATGAAAGAAGAAAACGTAACAATGAGGCGGCAAAAAAGTCAAGGGATGCACGAAAAATTCGTGAAGATCGTATTGCATTTAGAGCAGCATTTTTGGAGCAAGAGAATTCACTATTAAGAGCCCAAGTAATGGCCCTAAGAGATGAACTACAAACAATGCGTCAAATAATTGGACGCagtaatttaaatcaaatttag
- Protein Sequence
- MKTPRASPILDVMDSPTLEQFPSELENTANCLIPTETLVTNKSQNFLKPSIEIETLPKVHLNDNELRLANLNVLPLPAGPSTTLLNHQAATLPAFEYLAPAVRNISPVDLPLMELNRVGGIFPSFLHRRPRGEKRPIPEEQKDNKYYERRKRNNEAAKKSRDARKIREDRIAFRAAFLEQENSLLRAQVMALRDELQTMRQIIGRSNLNQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01194122;
- 90% Identity
- -
- 80% Identity
- -