Chom002847.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- Atf6
- Assembly
- GCA_004302925.1
- Location
- PYHX01001642.1:1694126-1709074[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-16 1.7e-13 50.3 9.2 2 62 517 577 516 579 0.94
Sequence Information
- Coding Sequence
- ATGGATGTGGACAATGAAAACTTTTACGatGAAATAGCATCGTTTATGCCTCAACCAGGGGACTATAGTTTGGATGATCTTGAAGAGATAATACGATCTACGGACTCTCAATTAGATGCTTCATTAGATATAAATGCTTTTGCAAATACATTTAATCAAAATGATTTTGATATGGCAGTTACAGATCCAAATGTATTTTCACTAACTGATAAACCTAATGTCGAACAGATACCAGCCGTCTTACAATCGCAACAAGAAAACCAACTCCAACAACCCACGGTAGATGACAATGAgtgtcattttaatttttcagcaTTTCCCTCACCTGCTACATCTCAACAATCGGCTGGTTATTCATCGCCAAATGAAACTCCCGGTCGTACATCTTCGCCCTCATCGTTAGATGGTGATCAATTTAATCCAGatgatttcattaatttcctCAATGACGGTGATGCAAAAATTGATGATTTGACACATGATACTATTAtgaaactaaatgagaattgtCGTAATACGCCCTCCCCAACTGGTAGCTGCACAAGTTCTAGTGGAAGTTCGACAAGTGGTATACAGAGTGATGCATCGTCAGTGGTTTCAATGccgcaaaattataattttaccaTGAAACAAGAGCATGATGACGATcttttagagtttataaaatttaaaaatgaaaaatctgaacgagatattaaaatgaatgaaactACACAACAATCACCACCACTTGCACAGCaatttgataataatatttctacAAATCCGGACATTGTAAAAGATGATGAAATGGCatcaacaacgacaacaactgCTACAACTACCTTATTGCCAATTACATTGCCGGTATTGCCAGTAACTACAATACAGACTGTACCGCCAGTAAATTTTGTTCAAGGAGCTACTCTTATACCAGTGCAAACTGTACCACTGACTACTGTTAAGCCGGTAGTTAATATTAAAGCACCTACagctattaaaattgaaaataaatctcttcCAGCTAATAAAAATGTGGCTACAGCACCTGCAAATTTggtaaaaacagcaacaaatggATCTAATAGTGTTAATAGTGGTAGTATAAAAGTAACGCCTCCTCCTAATGCAAAACCTAAAACTATATTTCTTTCCTCGAATGACTTCAAAGCGTTAAtgcaaaaaatgaataaaaatggtaaaaatataACAGGAGTGAATGGTCAAATGcccaaaattattatgaaaactgCGAACGGCAAAGTTATAGCAGCAAATAAATTAACCAGTAATACCAGCACAAATTCTTCATCTTCATCGGCTAGTATTAGTAATGCTTCCGTAACAACAACGGTTTCACCTTCACCGAATACTCAATCTTTACAATTTGTATCGAAGATGGTTAAAGCCTCCGGACCAATGATGGTTAAACAACAACCATCCAAAGTTGTTACAACAAATGCGCGTTCTGCAGCTGCTATGGCTGCTGCCGCCAGAGCAACACTAAGCCATACAAAAATTAGCGGTCGTTCCGATTTCTCCATGCTTAAGGGTTTAAACGATGATAAACTATTGAAAAAACAATTGCGCATGTTGAAAAATCGTGAATCGGCTTCATTGTCACgtaaaaagaaaaaggaatatgttgaaaaattggaaaatcgCATAAGtgatttagaaaaagaaaattattcctTAAAAGGGgaaaattcttcGTTACGTTCACAGTTGATGGCATTTGCTCAAACCTGTAAGTGTAAACATGGAAATGTAAgtgaattcattttaaatacgcTTAATATGGATTGTAAAAATGGTGGAGCAGTATTAAATGCAATTGATAGATCATATCTAATGAATAACGCCAAACAACATTTAGATAATTGTGGGAATGCATCGAATAATACTTGTggcaacacaacaacaacaacaacaacaacaacaacatcaacaacacaTCATGTAAAAATTGCTCCAAAACCTGCGAATTCGAGTACATTcataaataaagatttcaaGCAAAAAATGAATGCAACcacaattaagaaaaatgttgctATTCTATTTGCTATGGCATTTATGGTTACattaaatattggaaatttccaaaattatctcAATAAAACAGCTCTTGAGAATGCTATTGAGACAACGGTAACAAGTGGTAGTGATGAGCCAGCCGTACAAACAGGTCGACGTTTGTTATGGGTTCCAAATGAAGATGAATTTCATGAACAGACAAATCGCAGCAAACGCGAAACCGAAATGGCAAATATGCCACCACCGCCATTGCATTTTTTGCGTCCTATTAATCGTACGACAGCGGATAAAATAAATGGTACTTCGGCTAAGGATGAACCACCCATAAAGAGATCCTCGACAATAGGGGCTACGACAACGGCAACTTATGCAAATGCTACACAGGAAAATATGAGGTTGGCAAGGAATTTACATAAATGGATTGGCGGCaatgattatttgaatttaactgGTAACGGAATTGGCAATGATTTTGAACATAtggaacattttaaatttggcTCTGGATCTTATATGGATTATGATTTACCTCTACAAGCACCAATAGGTTCTAAACAGaaacgtaaaattttcttagaaccGGAAACACAACAAAAGCATGCAAAGTTTAATAGTGAAGGTGAACGAAATTCATTAGACTTGTTCAAGCCAAGAATAAGTGAAGAATATTTGAGACTTTTTAGGGGCATTAAGAGACAAGATGATACCTTTTATGTTTTGTCTTTTAATATGGATCATATTTTACTACCGGCATCGGTTTATAACAAAAGTTCACGCCCTAAAATGTCTCTCATGCTACCAGCTGGTGATCCATCACATAATGGCGATATAGTTTTAATGCAAATCGATTGTGAAGTCATTAACACAACAGAATTGGAAATAAAATCCCATATGATACCGGAAAAGTTAAGACCAACTAAATATTCATCTAATGTACGAGTAAATCCAAACGATGTTGCAAATAATGAAACGGCTGGTCCAGCTTCAGCTACAGCaactaaatcaaataatataccACTTAAAAGAGAAGAAACAAAGGAGAAACCTTCAGCTCCTCGTACTTACTTTATGATGGGTCCTAAAAATCAAGTATCACCCAATTCTACCACTACTTCTGCTGGTGGTGCAAATGATGTAAAGAGAAAGCCAACAATTGTTAAGTTAAATACCAATGACAGTGTAATTGGTAGTGGTGTATTAAATGTACGTAATTCAACTTTATTTACAAGAATGCGAGATACCGTGGGTTCTCAGAATAATGGCTTTTTAGCGGCAAcagatgttaaaaaattaatataa
- Protein Sequence
- MDVDNENFYDEIASFMPQPGDYSLDDLEEIIRSTDSQLDASLDINAFANTFNQNDFDMAVTDPNVFSLTDKPNVEQIPAVLQSQQENQLQQPTVDDNECHFNFSAFPSPATSQQSAGYSSPNETPGRTSSPSSLDGDQFNPDDFINFLNDGDAKIDDLTHDTIMKLNENCRNTPSPTGSCTSSSGSSTSGIQSDASSVVSMPQNYNFTMKQEHDDDLLEFIKFKNEKSERDIKMNETTQQSPPLAQQFDNNISTNPDIVKDDEMASTTTTTATTTLLPITLPVLPVTTIQTVPPVNFVQGATLIPVQTVPLTTVKPVVNIKAPTAIKIENKSLPANKNVATAPANLVKTATNGSNSVNSGSIKVTPPPNAKPKTIFLSSNDFKALMQKMNKNGKNITGVNGQMPKIIMKTANGKVIAANKLTSNTSTNSSSSSASISNASVTTTVSPSPNTQSLQFVSKMVKASGPMMVKQQPSKVVTTNARSAAAMAAAARATLSHTKISGRSDFSMLKGLNDDKLLKKQLRMLKNRESASLSRKKKKEYVEKLENRISDLEKENYSLKGENSSLRSQLMAFAQTCKCKHGNVSEFILNTLNMDCKNGGAVLNAIDRSYLMNNAKQHLDNCGNASNNTCGNTTTTTTTTTTSTTHHVKIAPKPANSSTFINKDFKQKMNATTIKKNVAILFAMAFMVTLNIGNFQNYLNKTALENAIETTVTSGSDEPAVQTGRRLLWVPNEDEFHEQTNRSKRETEMANMPPPPLHFLRPINRTTADKINGTSAKDEPPIKRSSTIGATTTATYANATQENMRLARNLHKWIGGNDYLNLTGNGIGNDFEHMEHFKFGSGSYMDYDLPLQAPIGSKQKRKIFLEPETQQKHAKFNSEGERNSLDLFKPRISEEYLRLFRGIKRQDDTFYVLSFNMDHILLPASVYNKSSRPKMSLMLPAGDPSHNGDIVLMQIDCEVINTTELEIKSHMIPEKLRPTKYSSNVRVNPNDVANNETAGPASATATKSNNIPLKREETKEKPSAPRTYFMMGPKNQVSPNSTTTSAGGANDVKRKPTIVKLNTNDSVIGSGVLNVRNSTLFTRMRDTVGSQNNGFLAATDVKKLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01194116; iTF_01260744; iTF_00331292; iTF_01258973;
- 90% Identity
- -
- 80% Identity
- -