Chom008365.1
Basic Information
- Insect
- Cochliomyia hominivorax
- Gene Symbol
- Xbp1
- Assembly
- GCA_004302925.1
- Location
- PYHX01003216.1:351463-353336[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-15 2.7e-12 46.4 17.9 2 65 82 159 82 159 0.97
Sequence Information
- Coding Sequence
- atgtcaACACAACCAACGGTATTTATAACCGTGCCCAAGTATGTGGCCATAACCCCCCTACAGACAGAAACAGCCTCTGCTGCTGTTACCACAGTGGGTAGCACCTCGTTGCCAAAAATTAGGCCAGCTCCCACCCGGGCTCCATGTACAGAATCAGCCTCAAATACAACAGCCAAAGGAGCAGCAACAAGTGAAACACAAGCCCCCAAGGGCAAAAAGAGACGTTTGGATCATTTAACATGGGAAGAAAAAGTCCAAAGAAAgaaattgaaAAATCGTGTTGCGGCGCAAACATCGCGAGATCGCAAAAAGGCCCGCATGGAAGAAATGGAACATGAAATTCATGATTTAACAGAAAAAACccagattttagttaataaatgtGAATCCCTACAAGCCATCAATGATTCGCTATTGGAGAAAAATCAGAAACTCGATTTGGAAGTCGAGATCTTACGCCAACAATTGCAAGAactacaaaagcaacaacaacaacataagacTGTAACCTGTGTCGGCTGGCTCAAACCTCAAGGATTCCCAGTCGTCACAGGAAACACTCGCCGTGTTGAAGTTGAAACAACAGCTGAAAAAGAGCGTAACAGTATCGTCCCTATGGCGTGTAATAGCTCTCTGCCTTCTTTACAAGATATGCTCTTACCCGACATCGAAATCGACGAAGGAGCGCTCGATGATGCAGAGTTTGATGCCGGAAAGTTGGAAGAACTTGCCGAAAGCTTGCTTGCCGATATCACAGCAGACCTGGAAGCAAGCGATAGAGCGAGCAATGCGTCTGTTACCGAAATTACAAGCGGAACAGAGCGATTGTTTGGATCAATGGTGGGGTCCACAACAGAGTGCATGGAATCCGGCGAACATAAAATCGGCTACAATGGCAGCAGCCTGATACCCCCTACACAAAGttcacaaaatatttctatacaaaCACCTGAACTTACATTAgagaataaatttgaaaaagaaacatCTGCCACTGTCGCAAGCAATACACAAACACTACAAACATTAAACACAAACagcacaacaaaaacaacagcctTAATAACAACAACGCCTAAAGATTCTACTCCAGTAACAGTAACACCCGATACAGTTTATGGTACTTACGATGCTAAAACAAATTCTATAACTATAGTCATGGACGATGTGGCAGTTCCAGTTAGTGAAGCTGTTGAAGAGATTTACTGTGATGGTGTAACTTCCAGCAACTCTACAGAAGAGTTAGTATGTACCACAAATGTGGCTTCACCCtcacaagtttttcttaatgtcACCAGCTGCTCAGATGACGAGgttgatgatgacgataatgacgttaatttcaattttgatcccatagaaaaatttctatgtcCCAAACGTCCTTTAGTCTCACCTTTAGCAAAATCTCCAGCAACTTCATTACACTCTGCCACATCGGATCATGGTTATGAATCAATAATCGGTTCACCTTCACCACCCAGTCATCATTTTGAGCCATTAAATGAAGAACTCAGTAATGATGACTTCAGCTCATGGCCACCggattttaatgaattatttcccagtttaatatag
- Protein Sequence
- MSTQPTVFITVPKYVAITPLQTETASAAVTTVGSTSLPKIRPAPTRAPCTESASNTTAKGAATSETQAPKGKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEHEIHDLTEKTQILVNKCESLQAINDSLLEKNQKLDLEVEILRQQLQELQKQQQQHKTVTCVGWLKPQGFPVVTGNTRRVEVETTAEKERNSIVPMACNSSLPSLQDMLLPDIEIDEGALDDAEFDAGKLEELAESLLADITADLEASDRASNASVTEITSGTERLFGSMVGSTTECMESGEHKIGYNGSSLIPPTQSSQNISIQTPELTLENKFEKETSATVASNTQTLQTLNTNSTTKTTALITTTPKDSTPVTVTPDTVYGTYDAKTNSITIVMDDVAVPVSEAVEEIYCDGVTSSNSTEELVCTTNVASPSQVFLNVTSCSDDEVDDDDNDVNFNFDPIEKFLCPKRPLVSPLAKSPATSLHSATSDHGYESIIGSPSPPSHHFEPLNEELSNDDFSSWPPDFNELFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01194118; iTF_01260743; iTF_00258614; iTF_00259524; iTF_00045127; iTF_01258974;
- 90% Identity
- -
- 80% Identity
- -